EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017390 (Gene tree)
Gene ID: 108276895
Gene Symbol: EHD1
Alias: -
Full Name: EH domain-containing protein 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12905 bases
Position: chr16:20538858-20551762
Accession: 108276895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025702	MMR_HSR1	PF01926.23	1e-08	1	1
ENSIPUP00000025711	MMR_HSR1	PF01926.23	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026769	-	1605	-	ENSIPUP00000025702	534 (aa)	-	-
ENSIPUT00000026778	-	4586	XM_017488976	ENSIPUP00000025711	535 (aa)	XP_017344465	W5UDD0

Gene Model

Click here to download ENSIPUG00000017390's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017390	EHD1	100	72.812	ENSIPUG00000018207	ehd4	98	73.458
ENSIPUG00000017390	EHD1	72	30.075	ENSIPUG00000011609	SRL	87	30.075
ENSIPUG00000017390	EHD1	99	84.557	ENSIPUG00000004603	Ehd3	99	84.557
ENSIPUG00000017390	EHD1	100	70.849	ENSIPUG00000000204	Ehd2	99	70.446
ENSIPUG00000017390	EHD1	99	85.472	ENSIPUG00000002819	ehd1a	99	85.472
ENSIPUG00000017390	EHD1	73	30.693	ENSIPUG00000012513	srl	86	30.693
ENSIPUG00000017390	EHD1	97	65.399	ENSIPUG00000024057	ehd2a	95	64.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017390	EHD1	99	84.211	ENSG00000110047	EHD1	100	91.358	Homo_sapiens
ENSIPUG00000017390	EHD1	98	86.260	ENSAPOG00000013440	ehd1a	99	86.095	Acanthochromis_polyacanthus
ENSIPUG00000017390	EHD1	99	83.271	ENSAMEG00000017785	EHD1	96	83.271	Ailuropoda_melanoleuca
ENSIPUG00000017390	EHD1	97	87.308	ENSACIG00000022182	ehd1a	98	87.308	Amphilophus_citrinellus
ENSIPUG00000017390	EHD1	98	86.641	ENSAOCG00000016322	ehd1a	99	86.476	Amphiprion_ocellaris
ENSIPUG00000017390	EHD1	98	86.641	ENSAPEG00000010363	ehd1a	99	86.476	Amphiprion_percula
ENSIPUG00000017390	EHD1	97	87.500	ENSATEG00000013980	ehd1a	98	87.500	Anabas_testudineus
ENSIPUG00000017390	EHD1	99	84.398	ENSANAG00000034810	EHD1	100	84.082	Aotus_nancymaae
ENSIPUG00000017390	EHD1	97	87.692	ENSACLG00000016016	ehd1a	98	87.692	Astatotilapia_calliptera
ENSIPUG00000017390	EHD1	99	84.717	ENSAMXG00000039344	ehd1a	99	84.717	Astyanax_mexicanus
ENSIPUG00000017390	EHD1	99	83.585	ENSAMXG00000031892	-	100	83.459	Astyanax_mexicanus
ENSIPUG00000017390	EHD1	99	84.211	ENSBTAG00000050712	EHD1	100	83.895	Bos_taurus
ENSIPUG00000017390	EHD1	99	67.407	WBGene00004373	rme-1	98	66.851	Caenorhabditis_elegans
ENSIPUG00000017390	EHD1	99	84.398	ENSCJAG00000002660	EHD1	100	84.082	Callithrix_jacchus
ENSIPUG00000017390	EHD1	79	83.649	ENSCAFG00000014128	EHD1	89	83.933	Canis_familiaris
ENSIPUG00000017390	EHD1	99	83.835	ENSCAFG00020014846	EHD1	100	83.521	Canis_lupus_dingo
ENSIPUG00000017390	EHD1	99	84.211	ENSCHIG00000020707	-	100	83.895	Capra_hircus
ENSIPUG00000017390	EHD1	99	83.835	ENSCPOG00000008157	EHD1	100	83.521	Cavia_porcellus
ENSIPUG00000017390	EHD1	99	84.398	ENSCCAG00000004590	EHD1	100	84.082	Cebus_capucinus
ENSIPUG00000017390	EHD1	99	84.211	ENSCATG00000010658	EHD1	97	84.211	Cercocebus_atys
ENSIPUG00000017390	EHD1	99	83.835	ENSCLAG00000016412	EHD1	100	83.521	Chinchilla_lanigera
ENSIPUG00000017390	EHD1	99	84.211	ENSCSAG00000007397	EHD1	100	83.895	Chlorocebus_sabaeus
ENSIPUG00000017390	EHD1	99	82.987	ENSCPBG00000023692	EHD1	99	82.243	Chrysemys_picta_bellii
ENSIPUG00000017390	EHD1	99	84.211	ENSCANG00000042123	EHD1	100	83.895	Colobus_angolensis_palliatus
ENSIPUG00000017390	EHD1	99	83.647	ENSCGRG00001019701	Ehd1	100	83.333	Cricetulus_griseus_chok1gshd
ENSIPUG00000017390	EHD1	94	83.832	ENSCGRG00000000662	Ehd1	99	83.832	Cricetulus_griseus_crigri
ENSIPUG00000017390	EHD1	97	85.385	ENSCSEG00000006078	ehd1a	98	85.385	Cynoglossus_semilaevis
ENSIPUG00000017390	EHD1	98	87.356	ENSCVAG00000012152	ehd1a	98	87.524	Cyprinodon_variegatus
ENSIPUG00000017390	EHD1	99	84.369	ENSDARG00000098853	ehd1a	100	83.895	Danio_rerio
ENSIPUG00000017390	EHD1	99	89.286	ENSDARG00000014793	ehd1b	100	89.286	Danio_rerio
ENSIPUG00000017390	EHD1	67	86.389	ENSDNOG00000017834	EHD1	96	86.389	Dasypus_novemcinctus
ENSIPUG00000017390	EHD1	99	83.835	ENSDORG00000030186	Ehd1	100	83.521	Dipodomys_ordii
ENSIPUG00000017390	EHD1	99	68.914	FBgn0016693	Past1	99	68.914	Drosophila_melanogaster
ENSIPUG00000017390	EHD1	99	77.861	ENSEBUG00000009968	EHD1	99	77.861	Eptatretus_burgeri
ENSIPUG00000017390	EHD1	58	80.064	ENSEBUG00000010829	EHD1	91	79.808	Eptatretus_burgeri
ENSIPUG00000017390	EHD1	99	83.647	ENSEASG00005018250	EHD1	100	83.333	Equus_asinus_asinus
ENSIPUG00000017390	EHD1	99	83.647	ENSECAG00000011638	EHD1	100	83.333	Equus_caballus
ENSIPUG00000017390	EHD1	98	84.895	ENSELUG00000007973	-	98	84.895	Esox_lucius
ENSIPUG00000017390	EHD1	99	87.287	ENSELUG00000016093	ehd1b	99	87.595	Esox_lucius
ENSIPUG00000017390	EHD1	99	83.459	ENSFCAG00000027734	EHD1	97	83.459	Felis_catus
ENSIPUG00000017390	EHD1	99	83.992	ENSFDAG00000007697	EHD1	99	83.992	Fukomys_damarensis
ENSIPUG00000017390	EHD1	97	87.500	ENSFHEG00000002690	ehd1a	98	87.500	Fundulus_heteroclitus
ENSIPUG00000017390	EHD1	97	87.500	ENSGMOG00000012192	ehd1a	99	87.500	Gadus_morhua
ENSIPUG00000017390	EHD1	98	87.214	ENSGAFG00000000730	ehd1a	98	87.500	Gambusia_affinis
ENSIPUG00000017390	EHD1	97	87.500	ENSGACG00000017605	ehd1a	98	87.500	Gasterosteus_aculeatus
ENSIPUG00000017390	EHD1	99	83.271	ENSGAGG00000001677	-	92	83.271	Gopherus_agassizii
ENSIPUG00000017390	EHD1	97	87.692	ENSHBUG00000012087	ehd1a	98	87.692	Haplochromis_burtoni
ENSIPUG00000017390	EHD1	99	83.835	ENSHGLG00000010254	EHD1	100	83.521	Heterocephalus_glaber_female
ENSIPUG00000017390	EHD1	99	83.835	ENSHGLG00100014206	EHD1	100	83.521	Heterocephalus_glaber_male
ENSIPUG00000017390	EHD1	97	87.115	ENSHCOG00000006825	ehd1a	98	87.115	Hippocampus_comes
ENSIPUG00000017390	EHD1	99	84.023	ENSSTOG00000009829	EHD1	100	83.708	Ictidomys_tridecemlineatus
ENSIPUG00000017390	EHD1	99	83.459	ENSJJAG00000022299	Ehd1	100	83.146	Jaculus_jaculus
ENSIPUG00000017390	EHD1	97	87.500	ENSKMAG00000004764	ehd1a	98	87.500	Kryptolebias_marmoratus
ENSIPUG00000017390	EHD1	98	87.165	ENSLBEG00000004390	ehd1a	98	87.332	Labrus_bergylta
ENSIPUG00000017390	EHD1	99	84.644	ENSLACG00000018148	EHD1	100	84.515	Latimeria_chalumnae
ENSIPUG00000017390	EHD1	99	80.603	ENSLOCG00000000924	ehd1b	96	80.603	Lepisosteus_oculatus
ENSIPUG00000017390	EHD1	99	81.015	ENSLAFG00000011643	EHD1	100	80.712	Loxodonta_africana
ENSIPUG00000017390	EHD1	99	84.211	ENSMFAG00000032608	EHD1	100	83.895	Macaca_fascicularis
ENSIPUG00000017390	EHD1	99	84.211	ENSMMUG00000003972	EHD1	97	84.211	Macaca_mulatta
ENSIPUG00000017390	EHD1	99	84.211	ENSMNEG00000031673	EHD1	100	83.895	Macaca_nemestrina
ENSIPUG00000017390	EHD1	99	84.211	ENSMLEG00000031992	EHD1	100	83.895	Mandrillus_leucophaeus
ENSIPUG00000017390	EHD1	98	86.641	ENSMAMG00000021737	ehd1a	98	86.948	Mastacembelus_armatus
ENSIPUG00000017390	EHD1	97	87.692	ENSMZEG00005004305	ehd1a	98	87.692	Maylandia_zebra
ENSIPUG00000017390	EHD1	99	83.647	ENSMAUG00000013823	Ehd1	100	83.333	Mesocricetus_auratus
ENSIPUG00000017390	EHD1	99	83.835	ENSMICG00000001239	EHD1	98	83.220	Microcebus_murinus
ENSIPUG00000017390	EHD1	99	83.835	ENSMOCG00000015517	Ehd1	100	83.521	Microtus_ochrogaster
ENSIPUG00000017390	EHD1	98	86.782	ENSMMOG00000003005	ehd1a	98	87.115	Mola_mola
ENSIPUG00000017390	EHD1	97	87.115	ENSMALG00000012679	ehd1a	98	87.115	Monopterus_albus
ENSIPUG00000017390	EHD1	99	83.647	MGP_CAROLIEiJ_G0022603	Ehd1	100	83.333	Mus_caroli
ENSIPUG00000017390	EHD1	99	83.647	ENSMUSG00000024772	Ehd1	100	83.333	Mus_musculus
ENSIPUG00000017390	EHD1	99	83.459	MGP_PahariEiJ_G0014097	Ehd1	100	83.146	Mus_pahari
ENSIPUG00000017390	EHD1	99	83.647	MGP_SPRETEiJ_G0023514	Ehd1	100	83.333	Mus_spretus
ENSIPUG00000017390	EHD1	99	84.023	ENSMPUG00000012497	EHD1	100	83.708	Mustela_putorius_furo
ENSIPUG00000017390	EHD1	99	83.835	ENSNGAG00000020358	Ehd1	100	83.521	Nannospalax_galili
ENSIPUG00000017390	EHD1	97	87.692	ENSNBRG00000002933	ehd1a	98	87.692	Neolamprologus_brichardi
ENSIPUG00000017390	EHD1	99	84.211	ENSNLEG00000005375	EHD1	100	83.895	Nomascus_leucogenys
ENSIPUG00000017390	EHD1	99	83.271	ENSOPRG00000011350	EHD1	100	82.959	Ochotona_princeps
ENSIPUG00000017390	EHD1	99	84.023	ENSODEG00000014527	EHD1	100	83.708	Octodon_degus
ENSIPUG00000017390	EHD1	60	88.272	ENSOCUG00000029532	EHD1	96	88.272	Oryctolagus_cuniculus
ENSIPUG00000017390	EHD1	97	86.154	ENSORLG00000022561	ehd1a	98	86.154	Oryzias_latipes
ENSIPUG00000017390	EHD1	97	85.962	ENSORLG00020018451	ehd1a	98	85.962	Oryzias_latipes_hni
ENSIPUG00000017390	EHD1	97	85.962	ENSORLG00015017672	ehd1a	98	85.962	Oryzias_latipes_hsok
ENSIPUG00000017390	EHD1	97	86.538	ENSOMEG00000019329	ehd1a	98	86.538	Oryzias_melastigma
ENSIPUG00000017390	EHD1	99	83.835	ENSOGAG00000009351	EHD1	100	83.521	Otolemur_garnettii
ENSIPUG00000017390	EHD1	91	85.597	ENSOARG00000010447	EHD1	99	85.597	Ovis_aries
ENSIPUG00000017390	EHD1	99	84.211	ENSPPAG00000037178	EHD1	100	83.895	Pan_paniscus
ENSIPUG00000017390	EHD1	99	81.203	ENSPPRG00000006031	EHD1	97	81.203	Panthera_pardus
ENSIPUG00000017390	EHD1	99	84.211	ENSPTRG00000003851	EHD1	97	84.211	Pan_troglodytes
ENSIPUG00000017390	EHD1	99	84.211	ENSPANG00000023358	EHD1	97	84.211	Papio_anubis
ENSIPUG00000017390	EHD1	67	91.922	ENSPKIG00000020297	-	88	91.922	Paramormyrops_kingsleyae
ENSIPUG00000017390	EHD1	99	86.338	ENSPKIG00000023165	-	99	86.641	Paramormyrops_kingsleyae
ENSIPUG00000017390	EHD1	99	83.835	ENSPSIG00000005727	EHD1	100	83.521	Pelodiscus_sinensis
ENSIPUG00000017390	EHD1	99	86.742	ENSPMGG00000017810	ehd1a	98	86.857	Periophthalmus_magnuspinnatus
ENSIPUG00000017390	EHD1	99	83.835	ENSPEMG00000010917	Ehd1	100	83.521	Peromyscus_maniculatus_bairdii
ENSIPUG00000017390	EHD1	73	68.895	ENSPCIG00000017053	-	96	68.895	Phascolarctos_cinereus
ENSIPUG00000017390	EHD1	99	84.023	ENSPCIG00000014850	EHD1	100	83.708	Phascolarctos_cinereus
ENSIPUG00000017390	EHD1	98	87.595	ENSPFOG00000010613	ehd1a	98	87.595	Poecilia_formosa
ENSIPUG00000017390	EHD1	98	87.595	ENSPLAG00000023296	ehd1a	98	88.077	Poecilia_latipinna
ENSIPUG00000017390	EHD1	98	87.405	ENSPMEG00000003397	ehd1a	98	87.885	Poecilia_mexicana
ENSIPUG00000017390	EHD1	98	87.214	ENSPREG00000015893	ehd1a	98	87.692	Poecilia_reticulata
ENSIPUG00000017390	EHD1	99	84.211	ENSPPYG00000003093	EHD1	100	83.895	Pongo_abelii
ENSIPUG00000017390	EHD1	99	83.835	ENSPCOG00000010309	EHD1	99	83.835	Propithecus_coquereli
ENSIPUG00000017390	EHD1	99	83.616	ENSPVAG00000007890	EHD1	99	83.616	Pteropus_vampyrus
ENSIPUG00000017390	EHD1	97	87.692	ENSPNYG00000015448	ehd1a	98	87.692	Pundamilia_nyererei
ENSIPUG00000017390	EHD1	99	86.038	ENSPNAG00000023091	ehd1a	99	86.038	Pygocentrus_nattereri
ENSIPUG00000017390	EHD1	99	87.970	ENSPNAG00000007408	EHD1	100	87.970	Pygocentrus_nattereri
ENSIPUG00000017390	EHD1	99	83.647	ENSRNOG00000043503	Ehd1	100	83.333	Rattus_norvegicus
ENSIPUG00000017390	EHD1	99	84.211	ENSRBIG00000039111	EHD1	100	83.895	Rhinopithecus_bieti
ENSIPUG00000017390	EHD1	99	84.211	ENSRROG00000026366	EHD1	100	83.895	Rhinopithecus_roxellana
ENSIPUG00000017390	EHD1	99	84.398	ENSSBOG00000023399	EHD1	100	84.082	Saimiri_boliviensis_boliviensis
ENSIPUG00000017390	EHD1	74	67.424	ENSSHAG00000007430	-	96	64.976	Sarcophilus_harrisii
ENSIPUG00000017390	EHD1	91	89.733	ENSSFOG00015019587	EHD1	100	89.571	Scleropages_formosus
ENSIPUG00000017390	EHD1	99	88.302	ENSSFOG00015006481	-	99	88.302	Scleropages_formosus
ENSIPUG00000017390	EHD1	97	85.962	ENSSMAG00000018210	ehd1a	98	85.962	Scophthalmus_maximus
ENSIPUG00000017390	EHD1	98	87.356	ENSSDUG00000016436	ehd1a	98	87.524	Seriola_dumerili
ENSIPUG00000017390	EHD1	98	87.356	ENSSLDG00000015328	ehd1a	98	87.524	Seriola_lalandi_dorsalis
ENSIPUG00000017390	EHD1	98	86.832	ENSSPAG00000008682	ehd1a	99	86.667	Stegastes_partitus
ENSIPUG00000017390	EHD1	99	84.211	ENSSSCG00000013017	EHD1	100	84.082	Sus_scrofa
ENSIPUG00000017390	EHD1	97	88.462	ENSTRUG00000025890	ehd1a	98	88.462	Takifugu_rubripes
ENSIPUG00000017390	EHD1	98	86.667	ENSTNIG00000016792	ehd1a	98	86.667	Tetraodon_nigroviridis
ENSIPUG00000017390	EHD1	78	75.904	ENSTBEG00000007057	EHD1	99	75.904	Tupaia_belangeri
ENSIPUG00000017390	EHD1	99	84.023	ENSTTRG00000008887	EHD1	100	83.708	Tursiops_truncatus
ENSIPUG00000017390	EHD1	99	83.835	ENSUAMG00000012071	EHD1	100	83.521	Ursus_americanus
ENSIPUG00000017390	EHD1	99	82.364	ENSUMAG00000007890	EHD1	99	83.205	Ursus_maritimus
ENSIPUG00000017390	EHD1	99	83.835	ENSVVUG00000027552	EHD1	84	83.835	Vulpes_vulpes
ENSIPUG00000017390	EHD1	99	83.051	ENSXETG00000001638	ehd1	99	83.051	Xenopus_tropicalis
ENSIPUG00000017390	EHD1	99	86.389	ENSXCOG00000001781	ehd1a	99	86.116	Xiphophorus_couchianus
ENSIPUG00000017390	EHD1	98	87.214	ENSXMAG00000005301	ehd1a	98	87.500	Xiphophorus_maculatus