EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017401 (Gene tree)
Gene ID: 108280885
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18359 bases
Position: chr20:15298707-15317065
Accession: 108280885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025687	MMR_HSR1	PF01926.23	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026753	-	4337	XM_017496378	ENSIPUP00000025687	244 (aa)	XP_017351867	A0A2D0TAH9

Gene Model

Click here to download ENSIPUG00000017401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017401	rab12	70	39.766	ENSIPUG00000012509	-	78	39.766
ENSIPUG00000017401	rab12	75	39.459	ENSIPUG00000023392	rab5a	83	39.459
ENSIPUG00000017401	rab12	61	31.788	ENSIPUG00000006053	hras	86	32.934
ENSIPUG00000017401	rab12	81	46.193	ENSIPUG00000021010	Rab30	80	50.932
ENSIPUG00000017401	rab12	58	37.589	ENSIPUG00000016494	rab23	78	35.185
ENSIPUG00000017401	rab12	82	33.816	ENSIPUG00000014035	rab9a	88	35.754
ENSIPUG00000017401	rab12	64	40.385	ENSIPUG00000018098	rab6b	75	40.385
ENSIPUG00000017401	rab12	72	39.205	ENSIPUG00000012218	RAB25	83	39.205
ENSIPUG00000017401	rab12	70	40.000	ENSIPUG00000020082	rab5c	82	40.556
ENSIPUG00000017401	rab12	66	50.000	ENSIPUG00000024622	rab35	80	50.000
ENSIPUG00000017401	rab12	61	31.788	ENSIPUG00000022502	hrasb	86	32.934
ENSIPUG00000017401	rab12	70	50.000	ENSIPUG00000003199	rab13	85	50.000
ENSIPUG00000017401	rab12	61	33.113	ENSIPUG00000004259	kras	97	31.383
ENSIPUG00000017401	rab12	83	34.314	ENSIPUG00000016261	RAB19	82	35.912
ENSIPUG00000017401	rab12	65	41.718	ENSIPUG00000014269	rab33a	70	41.718
ENSIPUG00000017401	rab12	79	48.438	ENSIPUG00000020508	rab1ab	83	52.663
ENSIPUG00000017401	rab12	77	49.206	ENSIPUG00000008650	rab1a	83	52.071
ENSIPUG00000017401	rab12	69	43.452	ENSIPUG00000007539	rab2a	79	43.452
ENSIPUG00000017401	rab12	68	37.278	ENSIPUG00000022445	RAB7A	81	37.278
ENSIPUG00000017401	rab12	72	37.714	ENSIPUG00000015058	rab6b	84	37.714
ENSIPUG00000017401	rab12	81	33.495	ENSIPUG00000022673	rab36	60	38.994
ENSIPUG00000017401	rab12	70	45.882	ENSIPUG00000019237	rab15	80	45.882
ENSIPUG00000017401	rab12	83	37.438	ENSIPUG00000006126	Rab25	78	41.212
ENSIPUG00000017401	rab12	66	38.788	ENSIPUG00000009784	-	74	38.788
ENSIPUG00000017401	rab12	65	33.540	ENSIPUG00000006702	rras	88	33.333
ENSIPUG00000017401	rab12	64	38.272	ENSIPUG00000017447	rab34a	61	38.750
ENSIPUG00000017401	rab12	81	39.698	ENSIPUG00000006091	RAB11A	76	43.030
ENSIPUG00000017401	rab12	69	38.418	ENSIPUG00000017684	rab33b	79	38.043
ENSIPUG00000017401	rab12	68	37.870	ENSIPUG00000017200	-	81	37.870
ENSIPUG00000017401	rab12	68	43.713	ENSIPUG00000020833	rab39b	78	43.713
ENSIPUG00000017401	rab12	82	37.313	ENSIPUG00000018050	RAB31	80	39.744
ENSIPUG00000017401	rab12	85	41.063	ENSIPUG00000011489	Rab35	80	48.765
ENSIPUG00000017401	rab12	64	31.210	ENSIPUG00000013954	rasm	81	32.749
ENSIPUG00000017401	rab12	67	32.317	ENSIPUG00000016561	rab9b	74	32.317
ENSIPUG00000017401	rab12	64	30.573	ENSIPUG00000000962	MRAS	84	32.022
ENSIPUG00000017401	rab12	71	36.464	ENSIPUG00000007246	rab7a	88	36.464
ENSIPUG00000017401	rab12	85	38.967	ENSIPUG00000015525	-	80	42.529
ENSIPUG00000017401	rab12	78	37.895	ENSIPUG00000021740	rab6a	91	37.569
ENSIPUG00000017401	rab12	69	51.479	ENSIPUG00000017890	Rab1A	84	51.479
ENSIPUG00000017401	rab12	81	39.594	ENSIPUG00000007415	rab14	80	41.954
ENSIPUG00000017401	rab12	82	35.323	ENSIPUG00000019382	rab41	95	39.130
ENSIPUG00000017401	rab12	83	38.679	ENSIPUG00000025100	rab11b	75	43.636
ENSIPUG00000017401	rab12	83	37.799	ENSIPUG00000019927	rab11bb	75	43.030
ENSIPUG00000017401	rab12	83	37.864	ENSIPUG00000011376	rab42a	87	39.247
ENSIPUG00000017401	rab12	68	43.713	ENSIPUG00000024203	rab39ba	78	43.713
ENSIPUG00000017401	rab12	75	42.935	ENSIPUG00000020226	RAB15	89	43.169
ENSIPUG00000017401	rab12	67	48.171	ENSIPUG00000010859	rab18b	79	48.171
ENSIPUG00000017401	rab12	64	39.752	ENSIPUG00000024531	rab34	62	39.752
ENSIPUG00000017401	rab12	83	39.713	ENSIPUG00000021401	Rab11a	95	39.713
ENSIPUG00000017401	rab12	77	39.487	ENSIPUG00000022394	zgc:101559	82	40.000
ENSIPUG00000017401	rab12	69	37.870	ENSIPUG00000010794	rab22a	83	37.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017401	rab12	84	86.829	ENSG00000206418	RAB12	92	86.222	Homo_sapiens
ENSIPUG00000017401	rab12	89	77.626	ENSAMEG00000007452	RAB12	94	81.279	Ailuropoda_melanoleuca
ENSIPUG00000017401	rab12	100	87.295	ENSACIG00000020616	rab12	100	87.295	Amphilophus_citrinellus
ENSIPUG00000017401	rab12	90	92.273	ENSAOCG00000002130	rab12	91	92.308	Amphiprion_ocellaris
ENSIPUG00000017401	rab12	90	92.273	ENSAPEG00000013255	rab12	91	92.308	Amphiprion_percula
ENSIPUG00000017401	rab12	90	92.727	ENSATEG00000019683	rab12	91	92.760	Anabas_testudineus
ENSIPUG00000017401	rab12	82	87.500	ENSACAG00000003360	RAB12	87	85.778	Anolis_carolinensis
ENSIPUG00000017401	rab12	90	93.636	ENSACLG00000007696	rab12	91	93.665	Astatotilapia_calliptera
ENSIPUG00000017401	rab12	100	89.024	ENSAMXG00000004882	rab12	100	90.244	Astyanax_mexicanus
ENSIPUG00000017401	rab12	84	87.317	ENSBTAG00000010356	RAB12	93	86.283	Bos_taurus
ENSIPUG00000017401	rab12	84	86.829	ENSCJAG00000015468	RAB12	66	85.841	Callithrix_jacchus
ENSIPUG00000017401	rab12	84	86.829	ENSCAFG00020023721	RAB12	78	85.841	Canis_lupus_dingo
ENSIPUG00000017401	rab12	84	87.317	ENSCHIG00000016103	RAB12	93	86.283	Capra_hircus
ENSIPUG00000017401	rab12	85	83.732	ENSCPOG00000022689	RAB12	100	87.619	Cavia_porcellus
ENSIPUG00000017401	rab12	84	86.829	ENSCCAG00000022862	RAB12	92	86.222	Cebus_capucinus
ENSIPUG00000017401	rab12	91	82.589	ENSCATG00000037784	RAB12	93	86.222	Cercocebus_atys
ENSIPUG00000017401	rab12	84	86.829	ENSCSAG00000017569	RAB12	65	85.841	Chlorocebus_sabaeus
ENSIPUG00000017401	rab12	91	83.784	ENSCPBG00000028375	RAB12	92	87.111	Chrysemys_picta_bellii
ENSIPUG00000017401	rab12	89	83.105	ENSCANG00000031453	RAB12	99	86.758	Colobus_angolensis_palliatus
ENSIPUG00000017401	rab12	93	81.140	ENSCGRG00001006958	Rab12	76	86.161	Cricetulus_griseus_chok1gshd
ENSIPUG00000017401	rab12	90	92.273	ENSCSEG00000016933	rab12	91	92.308	Cynoglossus_semilaevis
ENSIPUG00000017401	rab12	90	93.182	ENSCVAG00000003539	rab12	90	93.213	Cyprinodon_variegatus
ENSIPUG00000017401	rab12	100	87.295	ENSDARG00000089428	rab12	94	92.793	Danio_rerio
ENSIPUG00000017401	rab12	84	87.317	ENSDNOG00000046064	RAB12	52	86.283	Dasypus_novemcinctus
ENSIPUG00000017401	rab12	91	83.186	ENSDORG00000008920	Rab12	99	86.726	Dipodomys_ordii
ENSIPUG00000017401	rab12	81	63.452	ENSEBUG00000006581	rab12	92	65.445	Eptatretus_burgeri
ENSIPUG00000017401	rab12	84	86.829	ENSEASG00005002926	RAB12	77	85.841	Equus_asinus_asinus
ENSIPUG00000017401	rab12	84	86.829	ENSECAG00000007384	RAB12	66	85.841	Equus_caballus
ENSIPUG00000017401	rab12	100	86.885	ENSELUG00000007123	rab12	100	86.885	Esox_lucius
ENSIPUG00000017401	rab12	84	86.829	ENSFCAG00000027710	RAB12	67	85.841	Felis_catus
ENSIPUG00000017401	rab12	89	93.119	ENSFHEG00000004319	rab12	91	91.964	Fundulus_heteroclitus
ENSIPUG00000017401	rab12	76	91.935	ENSGMOG00000012335	rab12	79	91.979	Gadus_morhua
ENSIPUG00000017401	rab12	84	86.893	ENSGALG00000033608	RAB12	90	86.222	Gallus_gallus
ENSIPUG00000017401	rab12	90	84.932	ENSGACG00000016639	rab12	90	90.816	Gasterosteus_aculeatus
ENSIPUG00000017401	rab12	91	83.784	ENSGAGG00000007278	RAB12	92	87.111	Gopherus_agassizii
ENSIPUG00000017401	rab12	90	93.636	ENSHBUG00000008497	rab12	91	93.665	Haplochromis_burtoni
ENSIPUG00000017401	rab12	90	82.353	ENSHGLG00000006189	RAB12	86	86.425	Heterocephalus_glaber_female
ENSIPUG00000017401	rab12	100	84.016	ENSHCOG00000012376	rab12	91	89.140	Hippocampus_comes
ENSIPUG00000017401	rab12	89	83.105	ENSSTOG00000025122	RAB12	96	86.758	Ictidomys_tridecemlineatus
ENSIPUG00000017401	rab12	91	82.667	ENSJJAG00000019064	Rab12	99	86.222	Jaculus_jaculus
ENSIPUG00000017401	rab12	100	86.475	ENSKMAG00000020056	rab12	93	91.480	Kryptolebias_marmoratus
ENSIPUG00000017401	rab12	90	91.364	ENSLBEG00000013756	rab12	91	91.403	Labrus_bergylta
ENSIPUG00000017401	rab12	90	85.650	ENSLACG00000010461	RAB12	90	85.778	Latimeria_chalumnae
ENSIPUG00000017401	rab12	94	84.549	ENSLOCG00000002680	rab12	92	90.308	Lepisosteus_oculatus
ENSIPUG00000017401	rab12	84	86.829	ENSMFAG00000043551	RAB12	91	86.222	Macaca_fascicularis
ENSIPUG00000017401	rab12	84	86.829	ENSMNEG00000040853	RAB12	89	86.222	Macaca_nemestrina
ENSIPUG00000017401	rab12	90	92.273	ENSMAMG00000006862	rab12	91	92.308	Mastacembelus_armatus
ENSIPUG00000017401	rab12	90	93.636	ENSMZEG00005024316	rab12	91	93.665	Maylandia_zebra
ENSIPUG00000017401	rab12	83	83.824	ENSMGAG00000009197	RAB12	100	87.745	Meleagris_gallopavo
ENSIPUG00000017401	rab12	93	81.140	ENSMAUG00000008371	Rab12	76	86.161	Mesocricetus_auratus
ENSIPUG00000017401	rab12	91	82.589	ENSMICG00000030661	RAB12	95	85.841	Microcebus_murinus
ENSIPUG00000017401	rab12	94	80.603	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSIPUG00000017401	rab12	85	86.058	ENSMODG00000021452	RAB12	67	85.463	Monodelphis_domestica
ENSIPUG00000017401	rab12	91	90.950	ENSMALG00000015762	rab12	91	90.950	Monopterus_albus
ENSIPUG00000017401	rab12	93	80.702	MGP_CAROLIEiJ_G0021839	Rab12	77	86.161	Mus_caroli
ENSIPUG00000017401	rab12	93	80.702	ENSMUSG00000023460	Rab12	92	86.161	Mus_musculus
ENSIPUG00000017401	rab12	93	80.702	MGP_PahariEiJ_G0020826	Rab12	92	86.161	Mus_pahari
ENSIPUG00000017401	rab12	93	80.702	MGP_SPRETEiJ_G0022750	Rab12	77	86.161	Mus_spretus
ENSIPUG00000017401	rab12	91	82.589	ENSMLUG00000002883	RAB12	93	86.283	Myotis_lucifugus
ENSIPUG00000017401	rab12	84	86.893	ENSNGAG00000024103	-	96	85.778	Nannospalax_galili
ENSIPUG00000017401	rab12	91	76.339	ENSNGAG00000019722	-	92	76.106	Nannospalax_galili
ENSIPUG00000017401	rab12	90	93.636	ENSNBRG00000014428	rab12	91	93.665	Neolamprologus_brichardi
ENSIPUG00000017401	rab12	84	86.829	ENSNLEG00000006939	RAB12	93	86.283	Nomascus_leucogenys
ENSIPUG00000017401	rab12	100	78.543	ENSMEUG00000000493	RAB12	92	85.463	Notamacropus_eugenii
ENSIPUG00000017401	rab12	89	83.562	ENSODEG00000006414	RAB12	100	87.215	Octodon_degus
ENSIPUG00000017401	rab12	90	93.182	ENSONIG00000018469	rab12	91	93.213	Oreochromis_niloticus
ENSIPUG00000017401	rab12	90	94.091	ENSORLG00000003902	rab12	91	94.118	Oryzias_latipes
ENSIPUG00000017401	rab12	90	93.636	ENSORLG00020005131	rab12	91	93.665	Oryzias_latipes_hni
ENSIPUG00000017401	rab12	90	94.091	ENSORLG00015007869	rab12	91	94.118	Oryzias_latipes_hsok
ENSIPUG00000017401	rab12	90	93.636	ENSOMEG00000008191	rab12	91	93.665	Oryzias_melastigma
ENSIPUG00000017401	rab12	85	84.689	ENSOGAG00000028002	RAB12	99	88.095	Otolemur_garnettii
ENSIPUG00000017401	rab12	78	88.421	ENSOARG00000000728	RAB12	88	86.047	Ovis_aries
ENSIPUG00000017401	rab12	84	83.575	ENSPPAG00000009152	RAB12	97	87.864	Pan_paniscus
ENSIPUG00000017401	rab12	84	86.829	ENSPPRG00000024521	RAB12	92	86.222	Panthera_pardus
ENSIPUG00000017401	rab12	84	86.829	ENSPTRG00000009853	RAB12	92	86.222	Pan_troglodytes
ENSIPUG00000017401	rab12	93	82.456	ENSPANG00000009320	RAB12	91	85.841	Papio_anubis
ENSIPUG00000017401	rab12	90	90.498	ENSPKIG00000008579	rab12	93	90.583	Paramormyrops_kingsleyae
ENSIPUG00000017401	rab12	100	85.246	ENSPMGG00000001890	rab12	91	90.498	Periophthalmus_magnuspinnatus
ENSIPUG00000017401	rab12	93	81.579	ENSPEMG00000021032	Rab12	77	86.607	Peromyscus_maniculatus_bairdii
ENSIPUG00000017401	rab12	93	82.096	ENSPCIG00000010453	RAB12	57	85.463	Phascolarctos_cinereus
ENSIPUG00000017401	rab12	100	87.295	ENSPFOG00000001579	rab12	100	87.295	Poecilia_formosa
ENSIPUG00000017401	rab12	100	87.295	ENSPLAG00000013594	rab12	100	87.295	Poecilia_latipinna
ENSIPUG00000017401	rab12	100	87.295	ENSPMEG00000010417	rab12	100	87.295	Poecilia_mexicana
ENSIPUG00000017401	rab12	100	87.295	ENSPREG00000017487	rab12	100	87.295	Poecilia_reticulata
ENSIPUG00000017401	rab12	84	86.829	ENSPPYG00000009015	-	66	85.841	Pongo_abelii
ENSIPUG00000017401	rab12	84	86.829	ENSPCAG00000015007	RAB12	92	86.222	Procavia_capensis
ENSIPUG00000017401	rab12	84	86.829	ENSPCOG00000019816	RAB12	92	86.222	Propithecus_coquereli
ENSIPUG00000017401	rab12	84	86.341	ENSPVAG00000002757	RAB12	92	85.778	Pteropus_vampyrus
ENSIPUG00000017401	rab12	90	93.636	ENSPNYG00000005654	rab12	91	93.665	Pundamilia_nyererei
ENSIPUG00000017401	rab12	90	93.636	ENSPNYG00000023905	rab12	91	93.665	Pundamilia_nyererei
ENSIPUG00000017401	rab12	100	89.024	ENSPNAG00000015031	rab12	100	90.244	Pygocentrus_nattereri
ENSIPUG00000017401	rab12	93	79.039	ENSRNOG00000019295	Rab12	84	84.466	Rattus_norvegicus
ENSIPUG00000017401	rab12	91	82.589	ENSRBIG00000028760	RAB12	97	86.222	Rhinopithecus_bieti
ENSIPUG00000017401	rab12	91	82.667	ENSRROG00000019249	RAB12	94	86.222	Rhinopithecus_roxellana
ENSIPUG00000017401	rab12	90	79.372	ENSSBOG00000021125	RAB12	85	82.589	Saimiri_boliviensis_boliviensis
ENSIPUG00000017401	rab12	93	81.498	ENSSHAG00000001489	RAB12	91	86.341	Sarcophilus_harrisii
ENSIPUG00000017401	rab12	89	91.284	ENSSMAG00000012678	rab12	93	90.179	Scophthalmus_maximus
ENSIPUG00000017401	rab12	90	92.727	ENSSDUG00000008505	rab12	91	92.760	Seriola_dumerili
ENSIPUG00000017401	rab12	90	92.727	ENSSLDG00000022239	rab12	91	92.760	Seriola_lalandi_dorsalis
ENSIPUG00000017401	rab12	83	87.745	ENSSPUG00000003222	RAB12	91	87.111	Sphenodon_punctatus
ENSIPUG00000017401	rab12	90	92.273	ENSSPAG00000010822	rab12	91	92.308	Stegastes_partitus
ENSIPUG00000017401	rab12	93	82.018	ENSSSCG00000038026	RAB12	93	86.726	Sus_scrofa
ENSIPUG00000017401	rab12	84	87.379	ENSTGUG00000009889	RAB12	91	85.903	Taeniopygia_guttata
ENSIPUG00000017401	rab12	100	85.656	ENSTRUG00000024455	rab12	93	89.732	Takifugu_rubripes
ENSIPUG00000017401	rab12	100	86.885	ENSTNIG00000014859	rab12	91	92.308	Tetraodon_nigroviridis
ENSIPUG00000017401	rab12	82	87.500	ENSTTRG00000008711	RAB12	99	86.758	Tursiops_truncatus
ENSIPUG00000017401	rab12	84	86.829	ENSUAMG00000018092	RAB12	92	86.222	Ursus_americanus
ENSIPUG00000017401	rab12	91	81.696	ENSVVUG00000011748	RAB12	99	85.973	Vulpes_vulpes
ENSIPUG00000017401	rab12	93	80.786	ENSXETG00000004289	rab12	79	81.452	Xenopus_tropicalis
ENSIPUG00000017401	rab12	100	86.066	ENSXCOG00000019310	rab12	100	86.066	Xiphophorus_couchianus
ENSIPUG00000017401	rab12	100	86.475	ENSXMAG00000023617	rab12	100	86.475	Xiphophorus_maculatus