EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000017406 (Gene tree)
Gene ID: 108280143
Gene Symbol: mrps18a
Alias: si:ch211-117l16.3|zgc:152724
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 9720 bases
Position: chr19:5265279-5274998
Accession: 108280143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025683	Ribosomal_S18	PF01084.20	4.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026747	-	3642	XM_017494920	ENSIPUP00000025683	208 (aa)	XP_017350409	A0A2D0T688

Gene Model

Click here to download ENSIPUG00000017406's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017406	mrps18a	88	63.243	ENSG00000096080	MRPS18A	93	62.703	Homo_sapiens
ENSIPUG00000017406	mrps18a	88	63.243	ENSAMEG00000012117	MRPS18A	93	62.703	Ailuropoda_melanoleuca
ENSIPUG00000017406	mrps18a	100	68.095	ENSACIG00000017782	mrps18a	100	67.143	Amphilophus_citrinellus
ENSIPUG00000017406	mrps18a	71	58.667	ENSAOCG00000005723	mrps18a	81	62.319	Amphiprion_ocellaris
ENSIPUG00000017406	mrps18a	100	65.714	ENSAPEG00000006971	mrps18a	100	64.762	Amphiprion_percula
ENSIPUG00000017406	mrps18a	100	70.476	ENSATEG00000003132	mrps18a	100	70.000	Anabas_testudineus
ENSIPUG00000017406	mrps18a	77	69.375	ENSAPLG00000016280	MRPS18A	100	68.125	Anas_platyrhynchos
ENSIPUG00000017406	mrps18a	87	65.000	ENSACAG00000000642	MRPS18A	93	65.000	Anolis_carolinensis
ENSIPUG00000017406	mrps18a	94	59.898	ENSANAG00000030889	MRPS18A	99	59.391	Aotus_nancymaae
ENSIPUG00000017406	mrps18a	100	67.143	ENSACLG00000008170	mrps18a	100	66.190	Astatotilapia_calliptera
ENSIPUG00000017406	mrps18a	55	84.211	ENSAMXG00000036055	-	84	84.211	Astyanax_mexicanus
ENSIPUG00000017406	mrps18a	100	70.192	ENSAMXG00000036348	mrps18a	100	70.192	Astyanax_mexicanus
ENSIPUG00000017406	mrps18a	87	64.088	ENSBTAG00000025571	MRPS18A	91	64.088	Bos_taurus
ENSIPUG00000017406	mrps18a	90	61.170	ENSCJAG00000017382	MRPS18A	95	60.638	Callithrix_jacchus
ENSIPUG00000017406	mrps18a	94	61.616	ENSCAFG00000001928	MRPS18A	100	61.111	Canis_familiaris
ENSIPUG00000017406	mrps18a	94	62.121	ENSCAFG00020012064	MRPS18A	83	61.616	Canis_lupus_dingo
ENSIPUG00000017406	mrps18a	87	63.536	ENSCHIG00000013039	MRPS18A	91	63.536	Capra_hircus
ENSIPUG00000017406	mrps18a	87	63.536	ENSTSYG00000001390	MRPS18A	91	62.983	Carlito_syrichta
ENSIPUG00000017406	mrps18a	71	67.114	ENSCAPG00000016029	MRPS18A	90	66.443	Cavia_aperea
ENSIPUG00000017406	mrps18a	86	63.128	ENSCPOG00000022949	MRPS18A	87	64.162	Cavia_porcellus
ENSIPUG00000017406	mrps18a	88	62.295	ENSCCAG00000021108	MRPS18A	92	61.749	Cebus_capucinus
ENSIPUG00000017406	mrps18a	80	66.467	ENSCATG00000012963	MRPS18A	94	61.497	Cercocebus_atys
ENSIPUG00000017406	mrps18a	89	62.567	ENSCLAG00000012929	MRPS18A	91	63.536	Chinchilla_lanigera
ENSIPUG00000017406	mrps18a	80	66.467	ENSCSAG00000012127	MRPS18A	94	61.497	Chlorocebus_sabaeus
ENSIPUG00000017406	mrps18a	80	63.253	ENSCPBG00000025243	MRPS18A	85	62.651	Chrysemys_picta_bellii
ENSIPUG00000017406	mrps18a	87	35.519	ENSCING00000024771	-	90	34.973	Ciona_intestinalis
ENSIPUG00000017406	mrps18a	74	35.714	ENSCSAVG00000009539	-	84	35.065	Ciona_savignyi
ENSIPUG00000017406	mrps18a	95	60.101	ENSCANG00000039873	MRPS18A	99	58.015	Colobus_angolensis_palliatus
ENSIPUG00000017406	mrps18a	88	56.831	ENSCGRG00001017882	Mrps18a	98	56.284	Cricetulus_griseus_chok1gshd
ENSIPUG00000017406	mrps18a	88	48.901	ENSCGRG00000000079	Mrps18a	94	48.352	Cricetulus_griseus_crigri
ENSIPUG00000017406	mrps18a	100	66.667	ENSCSEG00000019650	mrps18a	100	63.033	Cynoglossus_semilaevis
ENSIPUG00000017406	mrps18a	100	68.720	ENSCVAG00000006511	mrps18a	100	67.773	Cyprinodon_variegatus
ENSIPUG00000017406	mrps18a	100	73.333	ENSDARG00000024465	mrps18a	100	73.333	Danio_rerio
ENSIPUG00000017406	mrps18a	88	64.324	ENSDNOG00000035755	MRPS18A	93	63.784	Dasypus_novemcinctus
ENSIPUG00000017406	mrps18a	87	65.746	ENSDORG00000014583	Mrps18a	91	65.193	Dipodomys_ordii
ENSIPUG00000017406	mrps18a	65	36.691	FBgn0051450	mRpS18A	72	41.228	Drosophila_melanogaster
ENSIPUG00000017406	mrps18a	72	54.011	ENSETEG00000014171	MRPS18A	100	53.476	Echinops_telfairi
ENSIPUG00000017406	mrps18a	78	64.417	ENSEASG00005003485	MRPS18A	59	63.804	Equus_asinus_asinus
ENSIPUG00000017406	mrps18a	78	63.804	ENSECAG00000004870	MRPS18A	59	63.190	Equus_caballus
ENSIPUG00000017406	mrps18a	100	72.512	ENSELUG00000005253	mrps18a	100	71.564	Esox_lucius
ENSIPUG00000017406	mrps18a	88	64.865	ENSFCAG00000036031	MRPS18A	93	64.324	Felis_catus
ENSIPUG00000017406	mrps18a	87	61.878	ENSFALG00000011356	MRPS18A	94	60.773	Ficedula_albicollis
ENSIPUG00000017406	mrps18a	68	69.014	ENSFDAG00000012875	MRPS18A	70	68.310	Fukomys_damarensis
ENSIPUG00000017406	mrps18a	100	66.190	ENSFHEG00000009014	mrps18a	100	65.238	Fundulus_heteroclitus
ENSIPUG00000017406	mrps18a	100	67.788	ENSGMOG00000012493	mrps18a	100	67.308	Gadus_morhua
ENSIPUG00000017406	mrps18a	65	64.444	ENSGALG00000010296	MRPS18A	85	66.667	Gallus_gallus
ENSIPUG00000017406	mrps18a	100	66.667	ENSGAFG00000005211	mrps18a	100	65.714	Gambusia_affinis
ENSIPUG00000017406	mrps18a	100	64.423	ENSGACG00000013370	mrps18a	100	63.942	Gasterosteus_aculeatus
ENSIPUG00000017406	mrps18a	72	65.772	ENSGAGG00000017954	MRPS18A	79	65.101	Gopherus_agassizii
ENSIPUG00000017406	mrps18a	91	61.579	ENSGGOG00000006303	-	96	61.053	Gorilla_gorilla
ENSIPUG00000017406	mrps18a	100	67.143	ENSHBUG00000014682	mrps18a	100	66.190	Haplochromis_burtoni
ENSIPUG00000017406	mrps18a	80	68.263	ENSHGLG00000014356	MRPS18A	84	68.263	Heterocephalus_glaber_female
ENSIPUG00000017406	mrps18a	80	68.263	ENSHGLG00100010988	MRPS18A	84	68.263	Heterocephalus_glaber_male
ENSIPUG00000017406	mrps18a	100	66.029	ENSHCOG00000000856	mrps18a	100	65.550	Hippocampus_comes
ENSIPUG00000017406	mrps18a	80	65.143	ENSSTOG00000004490	MRPS18A	85	65.143	Ictidomys_tridecemlineatus
ENSIPUG00000017406	mrps18a	97	58.621	ENSJJAG00000006567	Mrps18a	100	58.128	Jaculus_jaculus
ENSIPUG00000017406	mrps18a	100	68.095	ENSKMAG00000014910	mrps18a	100	67.619	Kryptolebias_marmoratus
ENSIPUG00000017406	mrps18a	100	67.136	ENSLBEG00000003391	mrps18a	99	66.197	Labrus_bergylta
ENSIPUG00000017406	mrps18a	100	48.804	ENSLACG00000022160	mrps18a	100	47.847	Latimeria_chalumnae
ENSIPUG00000017406	mrps18a	100	62.559	ENSLOCG00000016008	mrps18a	100	61.611	Lepisosteus_oculatus
ENSIPUG00000017406	mrps18a	79	68.263	ENSLAFG00000001168	MRPS18A	84	67.665	Loxodonta_africana
ENSIPUG00000017406	mrps18a	80	66.467	ENSMFAG00000038311	MRPS18A	94	61.497	Macaca_fascicularis
ENSIPUG00000017406	mrps18a	80	66.467	ENSMMUG00000014749	MRPS18A	94	61.497	Macaca_mulatta
ENSIPUG00000017406	mrps18a	79	66.867	ENSMNEG00000044642	MRPS18A	94	61.497	Macaca_nemestrina
ENSIPUG00000017406	mrps18a	76	66.875	ENSMLEG00000041828	MRPS18A	100	66.250	Mandrillus_leucophaeus
ENSIPUG00000017406	mrps18a	100	70.476	ENSMAMG00000015478	mrps18a	100	69.524	Mastacembelus_armatus
ENSIPUG00000017406	mrps18a	100	67.143	ENSMZEG00005014925	mrps18a	100	66.190	Maylandia_zebra
ENSIPUG00000017406	mrps18a	87	63.536	ENSMGAG00000010915	MRPS18A	94	62.983	Meleagris_gallopavo
ENSIPUG00000017406	mrps18a	88	65.946	ENSMICG00000005062	MRPS18A	93	65.405	Microcebus_murinus
ENSIPUG00000017406	mrps18a	89	56.452	ENSMOCG00000015168	-	97	55.914	Microtus_ochrogaster
ENSIPUG00000017406	mrps18a	87	62.431	ENSMOCG00000021207	-	91	61.878	Microtus_ochrogaster
ENSIPUG00000017406	mrps18a	100	68.571	ENSMMOG00000015248	mrps18a	100	68.269	Mola_mola
ENSIPUG00000017406	mrps18a	88	50.000	ENSMODG00000018952	MRPS18A	95	50.218	Monodelphis_domestica
ENSIPUG00000017406	mrps18a	100	68.571	ENSMALG00000017044	mrps18a	81	79.195	Monopterus_albus
ENSIPUG00000017406	mrps18a	87	62.983	MGP_CAROLIEiJ_G0021656	Mrps18a	91	62.431	Mus_caroli
ENSIPUG00000017406	mrps18a	87	62.983	ENSMUSG00000023967	Mrps18a	91	62.431	Mus_musculus
ENSIPUG00000017406	mrps18a	87	62.431	MGP_PahariEiJ_G0020648	Mrps18a	91	61.878	Mus_pahari
ENSIPUG00000017406	mrps18a	87	62.983	MGP_SPRETEiJ_G0022568	Mrps18a	91	62.431	Mus_spretus
ENSIPUG00000017406	mrps18a	88	63.784	ENSMPUG00000012868	MRPS18A	76	64.088	Mustela_putorius_furo
ENSIPUG00000017406	mrps18a	93	62.887	ENSMLUG00000017755	MRPS18A	97	62.371	Myotis_lucifugus
ENSIPUG00000017406	mrps18a	79	65.060	ENSNGAG00000020052	Mrps18a	85	64.458	Nannospalax_galili
ENSIPUG00000017406	mrps18a	100	67.619	ENSNBRG00000021152	mrps18a	100	66.667	Neolamprologus_brichardi
ENSIPUG00000017406	mrps18a	88	62.703	ENSNLEG00000003865	MRPS18A	93	62.162	Nomascus_leucogenys
ENSIPUG00000017406	mrps18a	88	47.899	ENSMEUG00000013986	MRPS18A	95	47.059	Notamacropus_eugenii
ENSIPUG00000017406	mrps18a	89	63.636	ENSODEG00000015388	MRPS18A	91	64.641	Octodon_degus
ENSIPUG00000017406	mrps18a	100	67.619	ENSONIG00000000609	mrps18a	100	66.667	Oreochromis_niloticus
ENSIPUG00000017406	mrps18a	75	68.153	ENSOANG00000001955	MRPS18A	97	67.516	Ornithorhynchus_anatinus
ENSIPUG00000017406	mrps18a	88	61.622	ENSOCUG00000005544	MRPS18A	93	61.081	Oryctolagus_cuniculus
ENSIPUG00000017406	mrps18a	100	68.571	ENSORLG00000023864	mrps18a	100	67.619	Oryzias_latipes
ENSIPUG00000017406	mrps18a	100	68.571	ENSORLG00020002882	mrps18a	100	67.619	Oryzias_latipes_hni
ENSIPUG00000017406	mrps18a	100	67.619	ENSORLG00015022065	mrps18a	100	66.667	Oryzias_latipes_hsok
ENSIPUG00000017406	mrps18a	100	68.720	ENSOMEG00000018124	mrps18a	100	67.773	Oryzias_melastigma
ENSIPUG00000017406	mrps18a	97	60.099	ENSOGAG00000026551	MRPS18A	100	59.606	Otolemur_garnettii
ENSIPUG00000017406	mrps18a	87	63.536	ENSOARG00000008279	MRPS18A	91	63.536	Ovis_aries
ENSIPUG00000017406	mrps18a	88	63.243	ENSPPAG00000036291	MRPS18A	93	62.703	Pan_paniscus
ENSIPUG00000017406	mrps18a	88	65.946	ENSPPRG00000006429	MRPS18A	93	65.405	Panthera_pardus
ENSIPUG00000017406	mrps18a	88	65.405	ENSPTIG00000001653	MRPS18A	91	65.746	Panthera_tigris_altaica
ENSIPUG00000017406	mrps18a	88	63.243	ENSPTRG00000018209	MRPS18A	93	62.703	Pan_troglodytes
ENSIPUG00000017406	mrps18a	80	66.467	ENSPANG00000006967	MRPS18A	94	61.497	Papio_anubis
ENSIPUG00000017406	mrps18a	100	65.877	ENSPKIG00000012807	mrps18a	88	65.403	Paramormyrops_kingsleyae
ENSIPUG00000017406	mrps18a	74	67.033	ENSPSIG00000013672	MRPS18A	86	60.479	Pelodiscus_sinensis
ENSIPUG00000017406	mrps18a	100	60.190	ENSPMGG00000000493	mrps18a	100	59.242	Periophthalmus_magnuspinnatus
ENSIPUG00000017406	mrps18a	87	60.773	ENSPEMG00000000405	Mrps18a	91	60.221	Peromyscus_maniculatus_bairdii
ENSIPUG00000017406	mrps18a	83	62.428	ENSPMAG00000007012	mrps18a	97	60.221	Petromyzon_marinus
ENSIPUG00000017406	mrps18a	97	55.665	ENSPCIG00000024858	MRPS18A	84	62.874	Phascolarctos_cinereus
ENSIPUG00000017406	mrps18a	77	78.125	ENSPFOG00000009046	mrps18a	100	76.875	Poecilia_formosa
ENSIPUG00000017406	mrps18a	100	67.143	ENSPLAG00000011106	mrps18a	100	66.190	Poecilia_latipinna
ENSIPUG00000017406	mrps18a	100	66.667	ENSPMEG00000000736	mrps18a	100	65.714	Poecilia_mexicana
ENSIPUG00000017406	mrps18a	100	66.190	ENSPREG00000012172	mrps18a	95	65.238	Poecilia_reticulata
ENSIPUG00000017406	mrps18a	87	64.088	ENSPPYG00000017282	MRPS18A	91	63.536	Pongo_abelii
ENSIPUG00000017406	mrps18a	75	53.171	ENSPCAG00000004192	MRPS18A	98	52.683	Procavia_capensis
ENSIPUG00000017406	mrps18a	87	66.851	ENSPCOG00000014911	MRPS18A	91	66.298	Propithecus_coquereli
ENSIPUG00000017406	mrps18a	87	45.382	ENSPVAG00000002758	MRPS18A	68	65.741	Pteropus_vampyrus
ENSIPUG00000017406	mrps18a	100	67.619	ENSPNYG00000014753	mrps18a	100	66.667	Pundamilia_nyererei
ENSIPUG00000017406	mrps18a	100	81.340	ENSPNAG00000023462	mrps18a	100	81.517	Pygocentrus_nattereri
ENSIPUG00000017406	mrps18a	87	62.983	ENSRNOG00000019511	Mrps18a	91	62.431	Rattus_norvegicus
ENSIPUG00000017406	mrps18a	86	63.333	ENSRBIG00000028789	MRPS18A	91	62.778	Rhinopithecus_bieti
ENSIPUG00000017406	mrps18a	86	63.333	ENSRROG00000042368	-	91	62.778	Rhinopithecus_roxellana
ENSIPUG00000017406	mrps18a	95	59.296	ENSSBOG00000019943	MRPS18A	99	55.725	Saimiri_boliviensis_boliviensis
ENSIPUG00000017406	mrps18a	88	62.162	ENSSHAG00000015048	-	93	61.622	Sarcophilus_harrisii
ENSIPUG00000017406	mrps18a	100	64.904	ENSSFOG00015005628	mrps18a	100	64.423	Scleropages_formosus
ENSIPUG00000017406	mrps18a	100	68.269	ENSSMAG00000009353	mrps18a	100	67.308	Scophthalmus_maximus
ENSIPUG00000017406	mrps18a	100	62.019	ENSSDUG00000011655	mrps18a	100	61.058	Seriola_dumerili
ENSIPUG00000017406	mrps18a	100	62.381	ENSSLDG00000025435	mrps18a	100	61.429	Seriola_lalandi_dorsalis
ENSIPUG00000017406	mrps18a	87	66.111	ENSSPUG00000011517	MRPS18A	93	65.000	Sphenodon_punctatus
ENSIPUG00000017406	mrps18a	100	68.571	ENSSPAG00000000034	mrps18a	100	67.619	Stegastes_partitus
ENSIPUG00000017406	mrps18a	88	64.865	ENSSSCG00000001692	MRPS18A	93	64.324	Sus_scrofa
ENSIPUG00000017406	mrps18a	72	67.785	ENSTGUG00000008142	MRPS18A	100	66.443	Taeniopygia_guttata
ENSIPUG00000017406	mrps18a	100	67.143	ENSTRUG00000025134	mrps18a	100	66.190	Takifugu_rubripes
ENSIPUG00000017406	mrps18a	100	67.143	ENSTNIG00000016302	mrps18a	100	66.190	Tetraodon_nigroviridis
ENSIPUG00000017406	mrps18a	77	44.196	ENSTBEG00000004094	MRPS18A	87	43.304	Tupaia_belangeri
ENSIPUG00000017406	mrps18a	76	70.455	ENSTTRG00000006354	MRPS18A	64	70.455	Tursiops_truncatus
ENSIPUG00000017406	mrps18a	88	62.703	ENSUAMG00000013758	MRPS18A	93	62.162	Ursus_americanus
ENSIPUG00000017406	mrps18a	91	61.735	ENSUMAG00000005910	MRPS18A	99	61.224	Ursus_maritimus
ENSIPUG00000017406	mrps18a	65	62.319	ENSVVUG00000022444	-	68	60.870	Vulpes_vulpes
ENSIPUG00000017406	mrps18a	88	64.865	ENSVVUG00000029092	-	93	64.324	Vulpes_vulpes
ENSIPUG00000017406	mrps18a	68	60.993	ENSXETG00000003270	mrps18a	81	60.630	Xenopus_tropicalis
ENSIPUG00000017406	mrps18a	100	63.462	ENSXCOG00000007223	mrps18a	100	62.500	Xiphophorus_couchianus
ENSIPUG00000017406	mrps18a	100	67.143	ENSXMAG00000004867	mrps18a	100	66.190	Xiphophorus_maculatus