EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017481 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 594 bases
Position: chr23:9509288-9509881
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025800	RVT_1	PF00078.27	5.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026869	-	594	-	ENSIPUP00000025800	197 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000017481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017481's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017481	-	78	87.013	ENSIPUG00000013052	-	50	87.013
ENSIPUG00000017481	-	78	46.753	ENSIPUG00000006650	-	53	46.753
ENSIPUG00000017481	-	94	86.486	ENSIPUG00000007789	-	64	86.486
ENSIPUG00000017481	-	83	60.976	ENSIPUG00000004434	-	81	60.976
ENSIPUG00000017481	-	95	85.027	ENSIPUG00000009893	-	53	85.027
ENSIPUG00000017481	-	65	44.531	ENSIPUG00000017061	-	52	43.103
ENSIPUG00000017481	-	88	76.437	ENSIPUG00000003714	-	73	76.437
ENSIPUG00000017481	-	95	88.235	ENSIPUG00000005377	-	50	88.235
ENSIPUG00000017481	-	95	87.701	ENSIPUG00000001254	-	73	87.701
ENSIPUG00000017481	-	92	89.503	ENSIPUG00000017577	-	91	89.503
ENSIPUG00000017481	-	93	90.761	ENSIPUG00000018566	-	88	90.761
ENSIPUG00000017481	-	95	87.166	ENSIPUG00000001282	-	67	87.166

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017481	-	79	47.879	ENSACIG00000019349	-	68	47.879	Amphilophus_citrinellus
ENSIPUG00000017481	-	95	64.362	ENSAPEG00000000917	-	50	64.362	Amphiprion_percula
ENSIPUG00000017481	-	80	49.682	ENSAPEG00000008260	-	67	49.682	Amphiprion_percula
ENSIPUG00000017481	-	82	52.795	ENSAPEG00000001164	-	63	52.795	Amphiprion_percula
ENSIPUG00000017481	-	91	56.111	ENSAPEG00000011071	-	52	56.111	Amphiprion_percula
ENSIPUG00000017481	-	81	66.667	ENSATEG00000015488	-	51	66.667	Anabas_testudineus
ENSIPUG00000017481	-	85	66.667	ENSATEG00000004853	-	52	66.667	Anabas_testudineus
ENSIPUG00000017481	-	79	74.839	ENSATEG00000024731	-	64	74.483	Anabas_testudineus
ENSIPUG00000017481	-	77	64.474	ENSATEG00000018909	-	50	64.474	Anabas_testudineus
ENSIPUG00000017481	-	94	63.978	ENSATEG00000010018	-	55	63.978	Anabas_testudineus
ENSIPUG00000017481	-	95	63.830	ENSATEG00000021051	-	55	63.830	Anabas_testudineus
ENSIPUG00000017481	-	82	45.062	ENSACAG00000028706	-	63	45.062	Anolis_carolinensis
ENSIPUG00000017481	-	89	49.432	ENSACAG00000028434	-	58	49.432	Anolis_carolinensis
ENSIPUG00000017481	-	93	61.957	ENSACLG00000021947	-	59	61.957	Astatotilapia_calliptera
ENSIPUG00000017481	-	95	62.234	ENSACLG00000003644	-	57	62.234	Astatotilapia_calliptera
ENSIPUG00000017481	-	97	64.583	ENSAMXG00000030100	-	52	64.583	Astyanax_mexicanus
ENSIPUG00000017481	-	93	65.217	ENSAMXG00000040990	-	54	65.217	Astyanax_mexicanus
ENSIPUG00000017481	-	69	55.882	ENSCVAG00000019758	-	75	55.725	Cyprinodon_variegatus
ENSIPUG00000017481	-	96	60.526	ENSDARG00000116065	CR848040.3	59	62.983	Danio_rerio
ENSIPUG00000017481	-	96	60.000	ENSELUG00000018891	-	53	60.000	Esox_lucius
ENSIPUG00000017481	-	95	53.476	ENSELUG00000019648	-	63	53.476	Esox_lucius
ENSIPUG00000017481	-	83	56.098	ENSFHEG00000017568	-	54	56.098	Fundulus_heteroclitus
ENSIPUG00000017481	-	91	52.222	ENSHBUG00000014670	-	56	52.222	Haplochromis_burtoni
ENSIPUG00000017481	-	98	49.744	ENSKMAG00000007346	-	74	49.744	Kryptolebias_marmoratus
ENSIPUG00000017481	-	91	66.111	ENSLBEG00000009763	-	62	66.111	Labrus_bergylta
ENSIPUG00000017481	-	94	52.688	ENSLBEG00000010233	-	51	52.688	Labrus_bergylta
ENSIPUG00000017481	-	93	64.481	ENSLBEG00000016484	-	56	64.481	Labrus_bergylta
ENSIPUG00000017481	-	93	65.027	ENSLBEG00000013551	-	66	65.027	Labrus_bergylta
ENSIPUG00000017481	-	64	40.625	ENSLBEG00000020214	-	72	43.103	Labrus_bergylta
ENSIPUG00000017481	-	95	65.241	ENSLBEG00000028866	-	59	65.241	Labrus_bergylta
ENSIPUG00000017481	-	90	51.124	ENSLACG00000022527	-	53	51.124	Latimeria_chalumnae
ENSIPUG00000017481	-	77	48.026	ENSLACG00000022619	-	54	48.026	Latimeria_chalumnae
ENSIPUG00000017481	-	88	47.399	ENSLACG00000022236	-	59	47.399	Latimeria_chalumnae
ENSIPUG00000017481	-	95	49.198	ENSLACG00000007146	-	65	49.198	Latimeria_chalumnae
ENSIPUG00000017481	-	77	47.368	ENSLACG00000022505	-	53	47.368	Latimeria_chalumnae
ENSIPUG00000017481	-	69	38.971	ENSLACG00000022213	-	71	38.971	Latimeria_chalumnae
ENSIPUG00000017481	-	77	48.026	ENSLACG00000022344	-	61	48.026	Latimeria_chalumnae
ENSIPUG00000017481	-	77	47.368	ENSLACG00000022149	-	50	47.368	Latimeria_chalumnae
ENSIPUG00000017481	-	77	46.053	ENSLACG00000022147	-	58	46.053	Latimeria_chalumnae
ENSIPUG00000017481	-	98	50.256	ENSMAMG00000011020	-	65	50.256	Mastacembelus_armatus
ENSIPUG00000017481	-	72	57.447	ENSMAMG00000016074	-	58	57.447	Mastacembelus_armatus
ENSIPUG00000017481	-	96	61.053	ENSMAMG00000008505	-	54	61.053	Mastacembelus_armatus
ENSIPUG00000017481	-	93	53.804	ENSMAMG00000002714	-	63	53.804	Mastacembelus_armatus
ENSIPUG00000017481	-	93	64.130	ENSMZEG00005022672	-	57	64.130	Maylandia_zebra
ENSIPUG00000017481	-	72	47.887	ENSMMOG00000010846	-	82	47.101	Mola_mola
ENSIPUG00000017481	-	94	58.602	ENSORLG00000028122	-	54	58.602	Oryzias_latipes
ENSIPUG00000017481	-	94	52.406	ENSORLG00000026083	-	52	52.406	Oryzias_latipes
ENSIPUG00000017481	-	92	61.326	ENSORLG00000027929	-	50	60.989	Oryzias_latipes
ENSIPUG00000017481	-	94	61.290	ENSORLG00000026882	-	65	61.290	Oryzias_latipes
ENSIPUG00000017481	-	94	61.828	ENSORLG00000027998	-	50	61.828	Oryzias_latipes
ENSIPUG00000017481	-	85	56.548	ENSORLG00000024021	-	64	56.548	Oryzias_latipes
ENSIPUG00000017481	-	95	59.893	ENSORLG00000027255	-	50	59.893	Oryzias_latipes
ENSIPUG00000017481	-	91	63.333	ENSORLG00000027051	-	58	63.333	Oryzias_latipes
ENSIPUG00000017481	-	91	50.276	ENSORLG00000030291	-	55	50.276	Oryzias_latipes
ENSIPUG00000017481	-	94	49.730	ENSORLG00000025528	-	61	49.730	Oryzias_latipes
ENSIPUG00000017481	-	94	61.828	ENSORLG00020022160	-	56	61.828	Oryzias_latipes_hni
ENSIPUG00000017481	-	90	63.483	ENSORLG00020016174	-	58	63.483	Oryzias_latipes_hni
ENSIPUG00000017481	-	94	61.290	ENSORLG00020015544	-	52	61.290	Oryzias_latipes_hni
ENSIPUG00000017481	-	78	50.327	ENSORLG00020002943	-	65	51.389	Oryzias_latipes_hni
ENSIPUG00000017481	-	94	61.828	ENSORLG00020007610	-	58	61.828	Oryzias_latipes_hni
ENSIPUG00000017481	-	94	62.366	ENSORLG00020008245	-	58	62.366	Oryzias_latipes_hni
ENSIPUG00000017481	-	94	61.828	ENSORLG00015016856	-	56	61.828	Oryzias_latipes_hsok
ENSIPUG00000017481	-	94	62.366	ENSORLG00015019038	-	56	62.366	Oryzias_latipes_hsok
ENSIPUG00000017481	-	94	60.753	ENSORLG00015020385	-	50	60.753	Oryzias_latipes_hsok
ENSIPUG00000017481	-	87	53.488	ENSORLG00015006385	-	54	52.542	Oryzias_latipes_hsok
ENSIPUG00000017481	-	92	61.326	ENSORLG00015022051	-	68	61.326	Oryzias_latipes_hsok
ENSIPUG00000017481	-	94	61.290	ENSORLG00015001218	-	56	61.290	Oryzias_latipes_hsok
ENSIPUG00000017481	-	94	61.290	ENSORLG00015002366	-	59	61.290	Oryzias_latipes_hsok
ENSIPUG00000017481	-	91	63.333	ENSORLG00015020409	-	57	63.333	Oryzias_latipes_hsok
ENSIPUG00000017481	-	94	53.226	ENSOMEG00000023569	-	50	53.226	Oryzias_melastigma
ENSIPUG00000017481	-	91	50.276	ENSOMEG00000016252	-	63	50.276	Oryzias_melastigma
ENSIPUG00000017481	-	79	48.750	ENSPKIG00000014328	-	52	48.750	Paramormyrops_kingsleyae
ENSIPUG00000017481	-	82	51.205	ENSPKIG00000017113	-	51	51.572	Paramormyrops_kingsleyae
ENSIPUG00000017481	-	87	50.000	ENSPKIG00000004473	-	63	48.876	Paramormyrops_kingsleyae
ENSIPUG00000017481	-	84	51.205	ENSPFOG00000024325	-	64	51.205	Poecilia_formosa
ENSIPUG00000017481	-	50	59.596	ENSPNYG00000006402	-	61	59.596	Pundamilia_nyererei
ENSIPUG00000017481	-	93	60.326	ENSPNAG00000000737	-	53	59.677	Pygocentrus_nattereri
ENSIPUG00000017481	-	94	70.968	ENSPNAG00000003097	-	62	70.968	Pygocentrus_nattereri
ENSIPUG00000017481	-	50	55.556	ENSPNAG00000027454	-	59	54.167	Pygocentrus_nattereri
ENSIPUG00000017481	-	86	46.821	ENSSPAG00000005749	-	56	46.821	Stegastes_partitus
ENSIPUG00000017481	-	78	61.688	ENSTRUG00000020404	-	58	60.417	Takifugu_rubripes