EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017482 (Gene tree)
Gene ID: 108269372
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5823 bases
Position: chr8:26028543-26034365
Accession: 108269372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025827	Exo_endo_phos	PF03372.23	2.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026897	-	1687	XM_017475213	ENSIPUP00000025827	558 (aa)	XP_017330702	A0A2D0RJL1

Gene Model

Click here to download ENSIPUG00000017482's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017482	cnot6b	100	87.276	ENSIPUG00000019831	cnot6a	100	87.276
ENSIPUG00000017482	cnot6b	100	73.118	ENSIPUG00000009879	cnot6l	100	73.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017482	cnot6b	100	84.409	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSIPUG00000017482	cnot6b	100	90.340	ENSAPOG00000009994	cnot6b	100	90.340	Acanthochromis_polyacanthus
ENSIPUG00000017482	cnot6b	100	84.643	ENSAMEG00000000949	CNOT6	99	84.643	Ailuropoda_melanoleuca
ENSIPUG00000017482	cnot6b	100	88.551	ENSACIG00000016566	cnot6b	100	88.551	Amphilophus_citrinellus
ENSIPUG00000017482	cnot6b	100	90.340	ENSAOCG00000006893	cnot6b	100	90.340	Amphiprion_ocellaris
ENSIPUG00000017482	cnot6b	100	90.340	ENSAPEG00000016949	cnot6b	100	90.340	Amphiprion_percula
ENSIPUG00000017482	cnot6b	100	88.551	ENSATEG00000007862	cnot6b	100	88.551	Anabas_testudineus
ENSIPUG00000017482	cnot6b	100	85.484	ENSAPLG00000012715	CNOT6	99	85.484	Anas_platyrhynchos
ENSIPUG00000017482	cnot6b	100	84.588	ENSACAG00000016548	CNOT6	100	84.588	Anolis_carolinensis
ENSIPUG00000017482	cnot6b	100	84.409	ENSANAG00000030436	CNOT6	96	84.409	Aotus_nancymaae
ENSIPUG00000017482	cnot6b	100	88.193	ENSACLG00000008279	cnot6b	100	89.088	Astatotilapia_calliptera
ENSIPUG00000017482	cnot6b	100	87.455	ENSAMXG00000019140	cnot6a	100	87.455	Astyanax_mexicanus
ENSIPUG00000017482	cnot6b	100	92.115	ENSAMXG00000034694	cnot6b	100	92.115	Astyanax_mexicanus
ENSIPUG00000017482	cnot6b	100	84.588	ENSBTAG00000017362	CNOT6	100	84.588	Bos_taurus
ENSIPUG00000017482	cnot6b	100	84.409	ENSCJAG00000009795	CNOT6	100	84.409	Callithrix_jacchus
ENSIPUG00000017482	cnot6b	100	84.946	ENSCAFG00000000464	CNOT6	100	84.946	Canis_familiaris
ENSIPUG00000017482	cnot6b	100	84.946	ENSCAFG00020002441	CNOT6	100	84.946	Canis_lupus_dingo
ENSIPUG00000017482	cnot6b	100	84.409	ENSCHIG00000019100	CNOT6	100	84.409	Capra_hircus
ENSIPUG00000017482	cnot6b	100	84.229	ENSTSYG00000003982	CNOT6	100	84.229	Carlito_syrichta
ENSIPUG00000017482	cnot6b	100	80.108	ENSCPOG00000035657	CNOT6	100	80.108	Cavia_porcellus
ENSIPUG00000017482	cnot6b	100	79.928	ENSCCAG00000033670	CNOT6	100	79.928	Cebus_capucinus
ENSIPUG00000017482	cnot6b	100	84.409	ENSCATG00000042014	CNOT6	100	84.409	Cercocebus_atys
ENSIPUG00000017482	cnot6b	100	83.692	ENSCLAG00000010489	CNOT6	100	83.692	Chinchilla_lanigera
ENSIPUG00000017482	cnot6b	100	84.409	ENSCSAG00000008165	CNOT6	100	84.409	Chlorocebus_sabaeus
ENSIPUG00000017482	cnot6b	100	85.125	ENSCHOG00000009680	CNOT6	100	85.125	Choloepus_hoffmanni
ENSIPUG00000017482	cnot6b	100	85.305	ENSCPBG00000008908	CNOT6	100	85.305	Chrysemys_picta_bellii
ENSIPUG00000017482	cnot6b	100	84.588	ENSCANG00000026756	CNOT6	100	84.588	Colobus_angolensis_palliatus
ENSIPUG00000017482	cnot6b	100	83.333	ENSCGRG00001011452	Cnot6	100	83.333	Cricetulus_griseus_chok1gshd
ENSIPUG00000017482	cnot6b	100	81.541	ENSCGRG00000010407	Cnot6	100	81.541	Cricetulus_griseus_crigri
ENSIPUG00000017482	cnot6b	100	89.088	ENSCSEG00000010939	cnot6b	100	89.088	Cynoglossus_semilaevis
ENSIPUG00000017482	cnot6b	100	88.909	ENSCVAG00000010538	cnot6b	100	88.909	Cyprinodon_variegatus
ENSIPUG00000017482	cnot6b	100	87.634	ENSDARG00000008255	cnot6a	100	87.634	Danio_rerio
ENSIPUG00000017482	cnot6b	100	87.634	ENSDARG00000101072	cnot6b	100	87.634	Danio_rerio
ENSIPUG00000017482	cnot6b	100	85.125	ENSDNOG00000041644	CNOT6	100	85.125	Dasypus_novemcinctus
ENSIPUG00000017482	cnot6b	100	76.703	ENSDORG00000001708	Cnot6	100	76.703	Dipodomys_ordii
ENSIPUG00000017482	cnot6b	100	67.621	ENSETEG00000006975	CNOT6	100	67.621	Echinops_telfairi
ENSIPUG00000017482	cnot6b	100	84.767	ENSEASG00005012794	-	100	84.767	Equus_asinus_asinus
ENSIPUG00000017482	cnot6b	89	79.960	ENSEASG00005012957	-	98	79.960	Equus_asinus_asinus
ENSIPUG00000017482	cnot6b	100	85.305	ENSECAG00000019325	CNOT6	100	85.305	Equus_caballus
ENSIPUG00000017482	cnot6b	100	79.749	ENSECAG00000012704	-	99	79.749	Equus_caballus
ENSIPUG00000017482	cnot6b	100	84.229	ENSEEUG00000015382	CNOT6	100	84.229	Erinaceus_europaeus
ENSIPUG00000017482	cnot6b	100	85.185	ENSELUG00000015981	cnot6b	99	85.185	Esox_lucius
ENSIPUG00000017482	cnot6b	100	84.050	ENSELUG00000024580	cnot6a	100	84.050	Esox_lucius
ENSIPUG00000017482	cnot6b	100	84.946	ENSFCAG00000001881	CNOT6	100	84.946	Felis_catus
ENSIPUG00000017482	cnot6b	100	85.663	ENSFALG00000007699	CNOT6	100	85.663	Ficedula_albicollis
ENSIPUG00000017482	cnot6b	100	83.513	ENSFDAG00000001999	CNOT6	100	83.513	Fukomys_damarensis
ENSIPUG00000017482	cnot6b	68	86.562	ENSFHEG00000013756	cnot6b	99	86.562	Fundulus_heteroclitus
ENSIPUG00000017482	cnot6b	95	88.847	ENSGMOG00000009767	cnot6b	99	88.847	Gadus_morhua
ENSIPUG00000017482	cnot6b	100	85.484	ENSGALG00000034316	CNOT6	100	85.484	Gallus_gallus
ENSIPUG00000017482	cnot6b	100	88.909	ENSGAFG00000008525	cnot6b	100	88.909	Gambusia_affinis
ENSIPUG00000017482	cnot6b	95	87.146	ENSGACG00000018046	cnot6b	99	87.146	Gasterosteus_aculeatus
ENSIPUG00000017482	cnot6b	100	70.251	ENSGAGG00000012176	CNOT6	100	70.251	Gopherus_agassizii
ENSIPUG00000017482	cnot6b	100	84.409	ENSGGOG00000003675	CNOT6	100	84.409	Gorilla_gorilla
ENSIPUG00000017482	cnot6b	100	88.372	ENSHBUG00000002819	cnot6b	100	89.267	Haplochromis_burtoni
ENSIPUG00000017482	cnot6b	100	83.513	ENSHGLG00000017756	CNOT6	100	83.513	Heterocephalus_glaber_female
ENSIPUG00000017482	cnot6b	100	83.513	ENSHGLG00100005747	CNOT6	100	83.513	Heterocephalus_glaber_male
ENSIPUG00000017482	cnot6b	100	87.299	ENSHCOG00000016176	cnot6b	100	88.193	Hippocampus_comes
ENSIPUG00000017482	cnot6b	100	84.588	ENSSTOG00000002803	CNOT6	100	84.409	Ictidomys_tridecemlineatus
ENSIPUG00000017482	cnot6b	100	83.513	ENSJJAG00000012296	Cnot6	100	83.513	Jaculus_jaculus
ENSIPUG00000017482	cnot6b	100	88.372	ENSKMAG00000004640	cnot6b	100	88.372	Kryptolebias_marmoratus
ENSIPUG00000017482	cnot6b	100	87.657	ENSLBEG00000027917	cnot6b	100	88.551	Labrus_bergylta
ENSIPUG00000017482	cnot6b	100	89.606	ENSLOCG00000010102	cnot6b	99	89.606	Lepisosteus_oculatus
ENSIPUG00000017482	cnot6b	100	85.663	ENSLAFG00000016742	CNOT6	100	85.663	Loxodonta_africana
ENSIPUG00000017482	cnot6b	100	84.409	ENSMFAG00000030867	CNOT6	100	84.409	Macaca_fascicularis
ENSIPUG00000017482	cnot6b	100	84.409	ENSMMUG00000018690	CNOT6	100	84.409	Macaca_mulatta
ENSIPUG00000017482	cnot6b	100	84.409	ENSMNEG00000038565	CNOT6	100	84.409	Macaca_nemestrina
ENSIPUG00000017482	cnot6b	100	84.409	ENSMLEG00000010555	CNOT6	100	84.409	Mandrillus_leucophaeus
ENSIPUG00000017482	cnot6b	100	90.519	ENSMAMG00000007515	cnot6b	100	90.519	Mastacembelus_armatus
ENSIPUG00000017482	cnot6b	100	88.193	ENSMZEG00005012899	cnot6b	100	89.088	Maylandia_zebra
ENSIPUG00000017482	cnot6b	100	84.050	ENSMAUG00000019798	Cnot6	100	84.050	Mesocricetus_auratus
ENSIPUG00000017482	cnot6b	100	83.154	ENSMICG00000013018	-	100	83.154	Microcebus_murinus
ENSIPUG00000017482	cnot6b	98	76.697	ENSMICG00000028378	-	99	76.697	Microcebus_murinus
ENSIPUG00000017482	cnot6b	100	84.050	ENSMOCG00000021662	Cnot6	100	84.050	Microtus_ochrogaster
ENSIPUG00000017482	cnot6b	100	87.097	ENSMMOG00000003227	cnot6b	100	87.097	Mola_mola
ENSIPUG00000017482	cnot6b	100	84.946	ENSMODG00000003979	CNOT6	100	84.946	Monodelphis_domestica
ENSIPUG00000017482	cnot6b	100	90.698	ENSMALG00000014251	cnot6b	100	90.698	Monopterus_albus
ENSIPUG00000017482	cnot6b	100	84.229	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.229	Mus_caroli
ENSIPUG00000017482	cnot6b	100	84.229	ENSMUSG00000020362	Cnot6	100	84.229	Mus_musculus
ENSIPUG00000017482	cnot6b	100	84.229	MGP_PahariEiJ_G0017413	Cnot6	100	84.229	Mus_pahari
ENSIPUG00000017482	cnot6b	100	84.229	MGP_SPRETEiJ_G0017122	Cnot6	100	84.229	Mus_spretus
ENSIPUG00000017482	cnot6b	100	85.305	ENSMPUG00000000587	CNOT6	96	85.305	Mustela_putorius_furo
ENSIPUG00000017482	cnot6b	100	83.126	ENSMLUG00000010257	CNOT6	100	83.126	Myotis_lucifugus
ENSIPUG00000017482	cnot6b	100	83.513	ENSNGAG00000008269	Cnot6	100	83.513	Nannospalax_galili
ENSIPUG00000017482	cnot6b	100	88.372	ENSNBRG00000010798	cnot6b	100	89.267	Neolamprologus_brichardi
ENSIPUG00000017482	cnot6b	100	83.333	ENSNLEG00000002322	CNOT6	100	83.333	Nomascus_leucogenys
ENSIPUG00000017482	cnot6b	81	80.930	ENSMEUG00000000025	CNOT6	81	80.930	Notamacropus_eugenii
ENSIPUG00000017482	cnot6b	88	85.952	ENSOPRG00000008244	-	88	85.952	Ochotona_princeps
ENSIPUG00000017482	cnot6b	100	83.333	ENSODEG00000007041	CNOT6	100	83.333	Octodon_degus
ENSIPUG00000017482	cnot6b	75	90.071	ENSONIG00000013027	cnot6b	99	90.071	Oreochromis_niloticus
ENSIPUG00000017482	cnot6b	100	84.409	ENSOANG00000010226	CNOT6	100	84.409	Ornithorhynchus_anatinus
ENSIPUG00000017482	cnot6b	100	83.571	ENSOCUG00000011083	CNOT6	100	83.571	Oryctolagus_cuniculus
ENSIPUG00000017482	cnot6b	100	89.267	ENSORLG00000005059	cnot6b	100	89.267	Oryzias_latipes
ENSIPUG00000017482	cnot6b	100	89.267	ENSORLG00020012784	cnot6b	100	89.267	Oryzias_latipes_hni
ENSIPUG00000017482	cnot6b	94	89.101	ENSORLG00015022658	cnot6b	98	89.101	Oryzias_latipes_hsok
ENSIPUG00000017482	cnot6b	100	89.624	ENSOMEG00000005295	cnot6b	100	89.624	Oryzias_melastigma
ENSIPUG00000017482	cnot6b	94	83.619	ENSOGAG00000032470	CNOT6	100	83.619	Otolemur_garnettii
ENSIPUG00000017482	cnot6b	97	83.610	ENSOARG00000001003	CNOT6	100	83.610	Ovis_aries
ENSIPUG00000017482	cnot6b	100	84.409	ENSPPAG00000032253	CNOT6	100	84.409	Pan_paniscus
ENSIPUG00000017482	cnot6b	100	84.946	ENSPPRG00000011912	CNOT6	100	84.946	Panthera_pardus
ENSIPUG00000017482	cnot6b	100	84.946	ENSPTIG00000016794	CNOT6	100	84.946	Panthera_tigris_altaica
ENSIPUG00000017482	cnot6b	100	84.409	ENSPTRG00000017636	CNOT6	100	84.409	Pan_troglodytes
ENSIPUG00000017482	cnot6b	100	84.409	ENSPANG00000016191	CNOT6	100	84.409	Papio_anubis
ENSIPUG00000017482	cnot6b	100	87.634	ENSPKIG00000021368	cnot6b	100	87.634	Paramormyrops_kingsleyae
ENSIPUG00000017482	cnot6b	98	85.321	ENSPSIG00000017307	CNOT6	100	85.321	Pelodiscus_sinensis
ENSIPUG00000017482	cnot6b	100	88.551	ENSPMGG00000011238	cnot6b	100	88.551	Periophthalmus_magnuspinnatus
ENSIPUG00000017482	cnot6b	100	83.333	ENSPEMG00000000627	Cnot6	100	83.333	Peromyscus_maniculatus_bairdii
ENSIPUG00000017482	cnot6b	100	84.946	ENSPCIG00000020319	CNOT6	99	84.946	Phascolarctos_cinereus
ENSIPUG00000017482	cnot6b	100	89.445	ENSPFOG00000006291	cnot6b	100	89.445	Poecilia_formosa
ENSIPUG00000017482	cnot6b	100	85.868	ENSPLAG00000008266	cnot6b	100	85.868	Poecilia_latipinna
ENSIPUG00000017482	cnot6b	100	89.445	ENSPMEG00000009091	cnot6b	100	89.445	Poecilia_mexicana
ENSIPUG00000017482	cnot6b	100	88.372	ENSPREG00000003713	cnot6b	100	88.372	Poecilia_reticulata
ENSIPUG00000017482	cnot6b	100	84.409	ENSPPYG00000016137	CNOT6	100	84.409	Pongo_abelii
ENSIPUG00000017482	cnot6b	59	94.595	ENSPCAG00000005599	-	59	94.595	Procavia_capensis
ENSIPUG00000017482	cnot6b	100	79.032	ENSPCOG00000017359	CNOT6	100	79.749	Propithecus_coquereli
ENSIPUG00000017482	cnot6b	100	81.362	ENSPVAG00000003069	CNOT6	100	81.362	Pteropus_vampyrus
ENSIPUG00000017482	cnot6b	100	88.014	ENSPNYG00000000321	cnot6b	100	88.909	Pundamilia_nyererei
ENSIPUG00000017482	cnot6b	100	87.993	ENSPNAG00000029586	cnot6a	100	87.993	Pygocentrus_nattereri
ENSIPUG00000017482	cnot6b	100	92.832	ENSPNAG00000028816	cnot6b	100	92.832	Pygocentrus_nattereri
ENSIPUG00000017482	cnot6b	100	83.333	ENSRNOG00000054891	Cnot6	100	83.333	Rattus_norvegicus
ENSIPUG00000017482	cnot6b	100	84.409	ENSRBIG00000004309	CNOT6	100	84.409	Rhinopithecus_bieti
ENSIPUG00000017482	cnot6b	100	84.409	ENSRROG00000035378	CNOT6	100	84.409	Rhinopithecus_roxellana
ENSIPUG00000017482	cnot6b	100	84.588	ENSSBOG00000030494	CNOT6	100	84.588	Saimiri_boliviensis_boliviensis
ENSIPUG00000017482	cnot6b	100	84.946	ENSSHAG00000017436	CNOT6	100	84.946	Sarcophilus_harrisii
ENSIPUG00000017482	cnot6b	100	89.247	ENSSFOG00015022383	cnot6a	96	89.247	Scleropages_formosus
ENSIPUG00000017482	cnot6b	100	90.143	ENSSFOG00015015133	CNOT6	100	90.143	Scleropages_formosus
ENSIPUG00000017482	cnot6b	100	88.909	ENSSMAG00000003084	cnot6b	100	88.909	Scophthalmus_maximus
ENSIPUG00000017482	cnot6b	100	90.519	ENSSDUG00000004151	cnot6b	100	90.519	Seriola_dumerili
ENSIPUG00000017482	cnot6b	100	89.624	ENSSLDG00000004448	cnot6b	100	90.519	Seriola_lalandi_dorsalis
ENSIPUG00000017482	cnot6b	64	66.852	ENSSARG00000012650	-	100	66.852	Sorex_araneus
ENSIPUG00000017482	cnot6b	100	85.125	ENSSPUG00000007893	CNOT6	100	85.125	Sphenodon_punctatus
ENSIPUG00000017482	cnot6b	100	90.519	ENSSPAG00000000149	cnot6b	100	90.519	Stegastes_partitus
ENSIPUG00000017482	cnot6b	100	85.125	ENSSSCG00000014009	CNOT6	100	85.125	Sus_scrofa
ENSIPUG00000017482	cnot6b	100	85.305	ENSTGUG00000001119	CNOT6	100	85.305	Taeniopygia_guttata
ENSIPUG00000017482	cnot6b	100	86.738	ENSTRUG00000002818	cnot6b	100	86.738	Takifugu_rubripes
ENSIPUG00000017482	cnot6b	100	87.814	ENSTNIG00000004443	cnot6b	99	87.814	Tetraodon_nigroviridis
ENSIPUG00000017482	cnot6b	76	73.134	ENSTBEG00000017094	-	87	73.134	Tupaia_belangeri
ENSIPUG00000017482	cnot6b	100	84.588	ENSTTRG00000009363	CNOT6	100	84.767	Tursiops_truncatus
ENSIPUG00000017482	cnot6b	77	82.093	ENSUAMG00000004579	CNOT6	99	73.757	Ursus_americanus
ENSIPUG00000017482	cnot6b	100	80.855	ENSUMAG00000024577	CNOT6	100	80.855	Ursus_maritimus
ENSIPUG00000017482	cnot6b	84	89.189	ENSVPAG00000003593	CNOT6	83	89.189	Vicugna_pacos
ENSIPUG00000017482	cnot6b	100	84.946	ENSVVUG00000026940	CNOT6	100	84.946	Vulpes_vulpes
ENSIPUG00000017482	cnot6b	100	86.225	ENSXCOG00000003360	cnot6b	100	86.225	Xiphophorus_couchianus
ENSIPUG00000017482	cnot6b	100	89.445	ENSXMAG00000008730	cnot6b	100	89.445	Xiphophorus_maculatus