EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000017548 (Gene tree)
Gene ID: 108260610
Gene Symbol: aptx
Alias: FHA-HIT
Full Name: aprataxin
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6360 bases
Position: chr29:15000747-15007106
Accession: 108260610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025931	DcpS_C	PF11969.8	2.5e-34	1	1
ENSIPUP00000025916	DcpS_C	PF11969.8	4.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026988	-	990	-	ENSIPUP00000025916	329 (aa)	-	-
ENSIPUT00000027004	-	1227	XM_017461026	ENSIPUP00000025931	339 (aa)	XP_017316515	A0A2D0QGI4

Gene Model

Click here to download ENSIPUG00000017548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017548	aptx	99	60.117	ENSG00000137074	APTX	94	74.157	Homo_sapiens
ENSIPUG00000017548	aptx	99	63.095	ENSAPOG00000008785	aptx	99	63.095	Acanthochromis_polyacanthus
ENSIPUG00000017548	aptx	99	60.000	ENSAMEG00000007648	APTX	95	60.000	Ailuropoda_melanoleuca
ENSIPUG00000017548	aptx	98	61.920	ENSACIG00000002035	aptx	99	61.920	Amphilophus_citrinellus
ENSIPUG00000017548	aptx	99	64.583	ENSAOCG00000000634	aptx	99	64.583	Amphiprion_ocellaris
ENSIPUG00000017548	aptx	99	64.583	ENSAPEG00000017253	aptx	99	64.583	Amphiprion_percula
ENSIPUG00000017548	aptx	99	63.393	ENSATEG00000017383	aptx	99	63.393	Anabas_testudineus
ENSIPUG00000017548	aptx	89	55.975	ENSAPLG00000015645	APTX	99	55.975	Anas_platyrhynchos
ENSIPUG00000017548	aptx	99	55.072	ENSACAG00000003581	APTX	94	56.522	Anolis_carolinensis
ENSIPUG00000017548	aptx	99	59.249	ENSANAG00000030160	APTX	96	58.841	Aotus_nancymaae
ENSIPUG00000017548	aptx	99	64.307	ENSACLG00000018887	aptx	99	64.307	Astatotilapia_calliptera
ENSIPUG00000017548	aptx	100	73.451	ENSAMXG00000039899	aptx	100	73.451	Astyanax_mexicanus
ENSIPUG00000017548	aptx	99	59.767	ENSBTAG00000013947	APTX	98	59.767	Bos_taurus
ENSIPUG00000017548	aptx	99	58.960	ENSCJAG00000007940	APTX	99	58.960	Callithrix_jacchus
ENSIPUG00000017548	aptx	99	61.290	ENSCAFG00000001812	APTX	99	61.290	Canis_familiaris
ENSIPUG00000017548	aptx	99	61.290	ENSCAFG00020015598	APTX	99	61.290	Canis_lupus_dingo
ENSIPUG00000017548	aptx	99	59.064	ENSCHIG00000012896	APTX	99	59.064	Capra_hircus
ENSIPUG00000017548	aptx	99	59.412	ENSTSYG00000003041	APTX	99	59.412	Carlito_syrichta
ENSIPUG00000017548	aptx	62	73.125	ENSCAPG00000013470	APTX	99	74.214	Cavia_aperea
ENSIPUG00000017548	aptx	99	59.412	ENSCPOG00000005975	APTX	99	73.333	Cavia_porcellus
ENSIPUG00000017548	aptx	99	58.960	ENSCCAG00000036783	APTX	99	58.960	Cebus_capucinus
ENSIPUG00000017548	aptx	99	59.824	ENSCATG00000042639	APTX	95	59.824	Cercocebus_atys
ENSIPUG00000017548	aptx	99	59.884	ENSCLAG00000012185	APTX	99	75.000	Chinchilla_lanigera
ENSIPUG00000017548	aptx	99	60.704	ENSCSAG00000009885	APTX	95	60.704	Chlorocebus_sabaeus
ENSIPUG00000017548	aptx	99	60.458	ENSCPBG00000023973	APTX	97	61.032	Chrysemys_picta_bellii
ENSIPUG00000017548	aptx	97	38.504	ENSCING00000008741	-	94	38.504	Ciona_intestinalis
ENSIPUG00000017548	aptx	98	38.547	ENSCSAVG00000008038	-	97	38.781	Ciona_savignyi
ENSIPUG00000017548	aptx	99	60.704	ENSCANG00000037253	APTX	99	60.704	Colobus_angolensis_palliatus
ENSIPUG00000017548	aptx	99	58.084	ENSCGRG00001000705	Aptx	98	72.222	Cricetulus_griseus_chok1gshd
ENSIPUG00000017548	aptx	99	57.270	ENSCGRG00000014159	Aptx	98	72.222	Cricetulus_griseus_crigri
ENSIPUG00000017548	aptx	99	63.905	ENSCSEG00000009549	aptx	99	63.905	Cynoglossus_semilaevis
ENSIPUG00000017548	aptx	99	63.095	ENSCVAG00000011942	aptx	99	63.095	Cyprinodon_variegatus
ENSIPUG00000017548	aptx	100	66.667	ENSDARG00000027143	aptx	100	67.251	Danio_rerio
ENSIPUG00000017548	aptx	99	59.412	ENSDNOG00000018498	APTX	95	59.412	Dasypus_novemcinctus
ENSIPUG00000017548	aptx	99	59.226	ENSDORG00000002139	Aptx	99	73.333	Dipodomys_ordii
ENSIPUG00000017548	aptx	53	40.571	FBgn0038704	CG5316	87	44.262	Drosophila_melanogaster
ENSIPUG00000017548	aptx	81	60.072	ENSETEG00000012459	APTX	78	60.432	Echinops_telfairi
ENSIPUG00000017548	aptx	95	48.348	ENSEBUG00000013914	aptx	91	48.649	Eptatretus_burgeri
ENSIPUG00000017548	aptx	99	59.882	ENSEASG00005004566	APTX	99	59.882	Equus_asinus_asinus
ENSIPUG00000017548	aptx	99	60.177	ENSECAG00000012674	APTX	91	60.177	Equus_caballus
ENSIPUG00000017548	aptx	85	57.483	ENSEEUG00000010693	APTX	95	57.483	Erinaceus_europaeus
ENSIPUG00000017548	aptx	99	60.411	ENSFCAG00000008728	APTX	99	60.411	Felis_catus
ENSIPUG00000017548	aptx	99	56.936	ENSFALG00000001230	APTX	99	56.936	Ficedula_albicollis
ENSIPUG00000017548	aptx	99	58.702	ENSFDAG00000013752	APTX	99	73.184	Fukomys_damarensis
ENSIPUG00000017548	aptx	82	62.199	ENSFHEG00000021328	aptx	73	62.199	Fundulus_heteroclitus
ENSIPUG00000017548	aptx	99	61.128	ENSGMOG00000012505	aptx	99	61.128	Gadus_morhua
ENSIPUG00000017548	aptx	99	56.322	ENSGALG00000001954	APTX	99	56.897	Gallus_gallus
ENSIPUG00000017548	aptx	99	63.690	ENSGAFG00000005086	aptx	99	63.690	Gambusia_affinis
ENSIPUG00000017548	aptx	100	61.947	ENSGACG00000017887	aptx	99	61.947	Gasterosteus_aculeatus
ENSIPUG00000017548	aptx	99	59.885	ENSGAGG00000013230	APTX	99	60.458	Gopherus_agassizii
ENSIPUG00000017548	aptx	85	59.259	ENSGGOG00000014232	APTX	80	79.091	Gorilla_gorilla
ENSIPUG00000017548	aptx	99	64.307	ENSHBUG00000021058	aptx	99	64.307	Haplochromis_burtoni
ENSIPUG00000017548	aptx	99	58.929	ENSHGLG00000015093	APTX	99	72.222	Heterocephalus_glaber_female
ENSIPUG00000017548	aptx	99	59.238	ENSHGLG00100013482	APTX	99	72.222	Heterocephalus_glaber_male
ENSIPUG00000017548	aptx	99	62.202	ENSHCOG00000018216	aptx	95	62.202	Hippocampus_comes
ENSIPUG00000017548	aptx	99	59.226	ENSSTOG00000005185	APTX	99	72.222	Ictidomys_tridecemlineatus
ENSIPUG00000017548	aptx	99	58.112	ENSJJAG00000015653	Aptx	99	58.112	Jaculus_jaculus
ENSIPUG00000017548	aptx	99	61.721	ENSKMAG00000000117	aptx	99	61.721	Kryptolebias_marmoratus
ENSIPUG00000017548	aptx	100	61.473	ENSLBEG00000015353	aptx	100	61.473	Labrus_bergylta
ENSIPUG00000017548	aptx	100	55.162	ENSLBEG00000021489	APTX	100	55.657	Labrus_bergylta
ENSIPUG00000017548	aptx	99	55.807	ENSLACG00000003376	APTX	99	57.062	Latimeria_chalumnae
ENSIPUG00000017548	aptx	99	61.095	ENSLOCG00000011556	aptx	95	61.095	Lepisosteus_oculatus
ENSIPUG00000017548	aptx	99	60.117	ENSLAFG00000005665	APTX	98	60.117	Loxodonta_africana
ENSIPUG00000017548	aptx	99	60.411	ENSMFAG00000043141	APTX	96	60.411	Macaca_fascicularis
ENSIPUG00000017548	aptx	99	60.411	ENSMMUG00000007724	APTX	95	60.411	Macaca_mulatta
ENSIPUG00000017548	aptx	99	60.117	ENSMNEG00000042341	APTX	99	60.117	Macaca_nemestrina
ENSIPUG00000017548	aptx	99	60.117	ENSMLEG00000035137	APTX	99	60.117	Mandrillus_leucophaeus
ENSIPUG00000017548	aptx	99	63.095	ENSMAMG00000018377	aptx	99	63.095	Mastacembelus_armatus
ENSIPUG00000017548	aptx	99	64.012	ENSMZEG00005022621	aptx	99	64.012	Maylandia_zebra
ENSIPUG00000017548	aptx	53	69.663	ENSMGAG00000005736	APTX	98	69.663	Meleagris_gallopavo
ENSIPUG00000017548	aptx	99	57.485	ENSMAUG00000006039	Aptx	98	71.667	Mesocricetus_auratus
ENSIPUG00000017548	aptx	99	59.357	ENSMICG00000006603	APTX	96	59.357	Microcebus_murinus
ENSIPUG00000017548	aptx	99	58.651	ENSMOCG00000000869	Aptx	99	72.222	Microtus_ochrogaster
ENSIPUG00000017548	aptx	100	65.306	ENSMMOG00000007028	aptx	100	65.306	Mola_mola
ENSIPUG00000017548	aptx	99	53.429	ENSMODG00000003365	APTX	99	53.429	Monodelphis_domestica
ENSIPUG00000017548	aptx	99	55.490	ENSMALG00000003828	aptx	99	55.490	Monopterus_albus
ENSIPUG00000017548	aptx	71	73.333	MGP_CAROLIEiJ_G0025897	-	99	73.333	Mus_caroli
ENSIPUG00000017548	aptx	99	58.631	ENSMUSG00000028411	Aptx	99	72.778	Mus_musculus
ENSIPUG00000017548	aptx	99	57.738	MGP_PahariEiJ_G0024020	Aptx	99	57.738	Mus_pahari
ENSIPUG00000017548	aptx	99	58.333	MGP_SPRETEiJ_G0026846	Aptx	96	58.333	Mus_spretus
ENSIPUG00000017548	aptx	99	60.588	ENSMPUG00000004290	APTX	99	60.588	Mustela_putorius_furo
ENSIPUG00000017548	aptx	99	59.824	ENSMLUG00000016081	APTX	94	59.824	Myotis_lucifugus
ENSIPUG00000017548	aptx	99	57.988	ENSNGAG00000016314	Aptx	99	71.429	Nannospalax_galili
ENSIPUG00000017548	aptx	99	62.798	ENSNBRG00000014199	aptx	99	62.798	Neolamprologus_brichardi
ENSIPUG00000017548	aptx	99	59.420	ENSNLEG00000032184	APTX	99	59.420	Nomascus_leucogenys
ENSIPUG00000017548	aptx	99	53.801	ENSMEUG00000004153	APTX	98	53.801	Notamacropus_eugenii
ENSIPUG00000017548	aptx	85	56.610	ENSOPRG00000012403	APTX	95	56.610	Ochotona_princeps
ENSIPUG00000017548	aptx	71	72.778	ENSODEG00000000097	-	78	72.785	Octodon_degus
ENSIPUG00000017548	aptx	99	58.929	ENSODEG00000015832	-	99	72.222	Octodon_degus
ENSIPUG00000017548	aptx	99	64.307	ENSONIG00000014541	aptx	83	64.307	Oreochromis_niloticus
ENSIPUG00000017548	aptx	85	55.082	ENSOANG00000009878	APTX	98	55.082	Ornithorhynchus_anatinus
ENSIPUG00000017548	aptx	100	59.593	ENSOCUG00000000738	-	98	59.386	Oryctolagus_cuniculus
ENSIPUG00000017548	aptx	71	73.224	ENSOCUG00000025059	-	93	73.224	Oryctolagus_cuniculus
ENSIPUG00000017548	aptx	99	63.127	ENSORLG00000006237	aptx	99	63.127	Oryzias_latipes
ENSIPUG00000017548	aptx	99	63.018	ENSORLG00020021478	aptx	99	63.018	Oryzias_latipes_hni
ENSIPUG00000017548	aptx	99	62.832	ENSORLG00015021873	aptx	99	62.832	Oryzias_latipes_hsok
ENSIPUG00000017548	aptx	87	63.300	ENSOMEG00000007875	aptx	81	63.300	Oryzias_melastigma
ENSIPUG00000017548	aptx	99	59.412	ENSOGAG00000005388	APTX	95	59.412	Otolemur_garnettii
ENSIPUG00000017548	aptx	99	59.184	ENSOARG00000009598	APTX	96	59.184	Ovis_aries
ENSIPUG00000017548	aptx	99	59.824	ENSPPAG00000030295	APTX	95	59.824	Pan_paniscus
ENSIPUG00000017548	aptx	99	60.411	ENSPPRG00000017524	APTX	99	60.411	Panthera_pardus
ENSIPUG00000017548	aptx	99	60.411	ENSPTIG00000020000	APTX	99	60.411	Panthera_tigris_altaica
ENSIPUG00000017548	aptx	99	59.824	ENSPTRG00000020850	APTX	99	59.824	Pan_troglodytes
ENSIPUG00000017548	aptx	99	60.411	ENSPANG00000025301	APTX	95	60.411	Papio_anubis
ENSIPUG00000017548	aptx	99	61.272	ENSPKIG00000013601	aptx	99	61.300	Paramormyrops_kingsleyae
ENSIPUG00000017548	aptx	99	60.177	ENSPSIG00000010521	APTX	94	60.177	Pelodiscus_sinensis
ENSIPUG00000017548	aptx	98	61.143	ENSPMGG00000018649	aptx	99	61.143	Periophthalmus_magnuspinnatus
ENSIPUG00000017548	aptx	99	58.631	ENSPEMG00000007747	Aptx	99	73.333	Peromyscus_maniculatus_bairdii
ENSIPUG00000017548	aptx	99	47.214	ENSPMAG00000008417	aptx	97	47.214	Petromyzon_marinus
ENSIPUG00000017548	aptx	99	58.239	ENSPCIG00000029852	APTX	99	58.239	Phascolarctos_cinereus
ENSIPUG00000017548	aptx	99	63.095	ENSPFOG00000004992	aptx	99	63.095	Poecilia_formosa
ENSIPUG00000017548	aptx	99	63.095	ENSPFOG00000005131	-	99	63.095	Poecilia_formosa
ENSIPUG00000017548	aptx	99	63.095	ENSPLAG00000007960	APTX	99	63.095	Poecilia_latipinna
ENSIPUG00000017548	aptx	99	63.095	ENSPLAG00000007906	aptx	99	63.095	Poecilia_latipinna
ENSIPUG00000017548	aptx	99	63.393	ENSPMEG00000018504	aptx	99	63.393	Poecilia_mexicana
ENSIPUG00000017548	aptx	99	63.393	ENSPMEG00000019789	APTX	99	63.393	Poecilia_mexicana
ENSIPUG00000017548	aptx	98	62.848	ENSPREG00000004375	aptx	99	62.848	Poecilia_reticulata
ENSIPUG00000017548	aptx	99	59.710	ENSPPYG00000019142	APTX	95	59.710	Pongo_abelii
ENSIPUG00000017548	aptx	99	50.000	ENSPCAG00000010014	APTX	99	50.000	Procavia_capensis
ENSIPUG00000017548	aptx	99	59.824	ENSPCOG00000016780	APTX	99	59.824	Propithecus_coquereli
ENSIPUG00000017548	aptx	99	58.551	ENSPVAG00000011468	APTX	95	58.551	Pteropus_vampyrus
ENSIPUG00000017548	aptx	99	64.307	ENSPNYG00000007675	aptx	99	64.307	Pundamilia_nyererei
ENSIPUG00000017548	aptx	100	67.930	ENSPNAG00000015984	aptx	100	67.930	Pygocentrus_nattereri
ENSIPUG00000017548	aptx	99	59.226	ENSRNOG00000006582	Aptx	99	59.226	Rattus_norvegicus
ENSIPUG00000017548	aptx	99	60.411	ENSRBIG00000042913	APTX	99	60.411	Rhinopithecus_bieti
ENSIPUG00000017548	aptx	99	60.411	ENSRROG00000035395	APTX	99	60.411	Rhinopithecus_roxellana
ENSIPUG00000017548	aptx	99	59.249	ENSSBOG00000025215	APTX	99	59.249	Saimiri_boliviensis_boliviensis
ENSIPUG00000017548	aptx	99	56.765	ENSSHAG00000012205	APTX	94	56.765	Sarcophilus_harrisii
ENSIPUG00000017548	aptx	99	63.143	ENSSFOG00015009267	aptx	99	63.143	Scleropages_formosus
ENSIPUG00000017548	aptx	99	63.422	ENSSMAG00000008839	aptx	99	63.422	Scophthalmus_maximus
ENSIPUG00000017548	aptx	99	63.717	ENSSDUG00000001989	aptx	99	63.717	Seriola_dumerili
ENSIPUG00000017548	aptx	99	62.500	ENSSLDG00000004915	aptx	99	62.500	Seriola_lalandi_dorsalis
ENSIPUG00000017548	aptx	99	58.974	ENSSPUG00000008994	APTX	86	58.974	Sphenodon_punctatus
ENSIPUG00000017548	aptx	99	64.583	ENSSPAG00000020373	aptx	99	64.583	Stegastes_partitus
ENSIPUG00000017548	aptx	99	59.292	ENSSSCG00000011001	APTX	98	59.292	Sus_scrofa
ENSIPUG00000017548	aptx	99	58.309	ENSTGUG00000001441	APTX	99	58.309	Taeniopygia_guttata
ENSIPUG00000017548	aptx	100	62.353	ENSTRUG00000009794	aptx	100	62.353	Takifugu_rubripes
ENSIPUG00000017548	aptx	100	61.765	ENSTNIG00000010570	aptx	99	61.765	Tetraodon_nigroviridis
ENSIPUG00000017548	aptx	99	54.118	ENSTBEG00000008504	APTX	95	54.118	Tupaia_belangeri
ENSIPUG00000017548	aptx	93	53.438	ENSTTRG00000007384	APTX	95	53.438	Tursiops_truncatus
ENSIPUG00000017548	aptx	99	60.588	ENSUAMG00000003700	APTX	99	59.939	Ursus_americanus
ENSIPUG00000017548	aptx	99	60.588	ENSUMAG00000005837	APTX	99	60.588	Ursus_maritimus
ENSIPUG00000017548	aptx	76	58.140	ENSVPAG00000001297	APTX	76	58.140	Vicugna_pacos
ENSIPUG00000017548	aptx	99	61.290	ENSVVUG00000021130	APTX	99	61.290	Vulpes_vulpes
ENSIPUG00000017548	aptx	99	56.977	ENSXETG00000024143	aptx	99	56.977	Xenopus_tropicalis
ENSIPUG00000017548	aptx	99	62.185	ENSXCOG00000005020	aptx	99	62.185	Xiphophorus_couchianus
ENSIPUG00000017548	aptx	99	64.602	ENSXMAG00000022086	aptx	96	64.602	Xiphophorus_maculatus