EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017653 (Gene tree)
Gene ID: 108271878
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13818 bases
Position: chr11:14656650-14670467
Accession: 108271878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000026064	zf-C2H2	PF00096.26	2.4e-27	1	4
ENSIPUP00000026064	zf-C2H2	PF00096.26	2.4e-27	2	4
ENSIPUP00000026064	zf-C2H2	PF00096.26	2.4e-27	3	4
ENSIPUP00000026064	zf-C2H2	PF00096.26	2.4e-27	4	4
ENSIPUP00000026079	zf-C2H2	PF00096.26	2.7e-20	1	3
ENSIPUP00000026079	zf-C2H2	PF00096.26	2.7e-20	2	3
ENSIPUP00000026079	zf-C2H2	PF00096.26	2.7e-20	3	3
ENSIPUP00000026064	zf-met	PF12874.7	6.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000027140	-	2492	XM_017479780	ENSIPUP00000026064	722 (aa)	XP_017335269	W5UGC9
ENSIPUT00000027156	-	2330	XM_017479781	ENSIPUP00000026079	668 (aa)	XP_017335270	A0A2D0RZ85

Gene Model

Click here to download ENSIPUG00000017653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017653	patz1	67	35.714	ENSIPUG00000023688	-	93	32.456
ENSIPUG00000017653	patz1	54	35.507	ENSIPUG00000011258	-	81	35.507
ENSIPUG00000017653	patz1	57	33.577	ENSIPUG00000008581	znf319b	83	33.577
ENSIPUG00000017653	patz1	60	36.145	ENSIPUG00000015400	-	95	36.145
ENSIPUG00000017653	patz1	69	33.523	ENSIPUG00000000380	zbtb49	83	35.333
ENSIPUG00000017653	patz1	52	33.333	ENSIPUG00000013283	zbtb16b	55	33.333
ENSIPUG00000017653	patz1	56	40.426	ENSIPUG00000010505	bcl6	52	40.426
ENSIPUG00000017653	patz1	52	33.784	ENSIPUG00000000764	zbtb16	54	34.286
ENSIPUG00000017653	patz1	66	43.056	ENSIPUG00000024433	ZBTB14	94	43.056
ENSIPUG00000017653	patz1	59	32.627	ENSIPUG00000021527	-	90	36.552
ENSIPUG00000017653	patz1	72	35.294	ENSIPUG00000011967	zbtb41	83	35.965
ENSIPUG00000017653	patz1	59	31.513	ENSIPUG00000013315	-	92	31.405
ENSIPUG00000017653	patz1	64	36.970	ENSIPUG00000022751	-	95	37.778
ENSIPUG00000017653	patz1	57	31.731	ENSIPUG00000022266	ZNF135	59	31.731
ENSIPUG00000017653	patz1	67	37.748	ENSIPUG00000016075	-	90	42.424
ENSIPUG00000017653	patz1	60	43.750	ENSIPUG00000000555	bcl6b	58	43.750
ENSIPUG00000017653	patz1	57	36.364	ENSIPUG00000001248	prdm5	74	36.364
ENSIPUG00000017653	patz1	58	41.333	ENSIPUG00000007076	-	91	37.255
ENSIPUG00000017653	patz1	56	31.839	ENSIPUG00000022741	-	79	39.634
ENSIPUG00000017653	patz1	62	41.935	ENSIPUG00000023635	-	97	40.496
ENSIPUG00000017653	patz1	59	40.179	ENSIPUG00000021441	-	94	40.179
ENSIPUG00000017653	patz1	82	35.135	ENSIPUG00000015468	-	85	35.135
ENSIPUG00000017653	patz1	57	36.434	ENSIPUG00000009604	zbtb11	52	36.434
ENSIPUG00000017653	patz1	60	36.095	ENSIPUG00000006916	-	77	36.095
ENSIPUG00000017653	patz1	65	42.500	ENSIPUG00000013251	bcl6ab	97	42.500
ENSIPUG00000017653	patz1	71	39.286	ENSIPUG00000021515	-	98	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017653	patz1	97	53.748	ENSG00000100105	PATZ1	97	60.285	Homo_sapiens
ENSIPUG00000017653	patz1	99	68.623	ENSAPOG00000018447	patz1	100	68.623	Acanthochromis_polyacanthus
ENSIPUG00000017653	patz1	97	59.889	ENSAMEG00000007074	PATZ1	97	54.184	Ailuropoda_melanoleuca
ENSIPUG00000017653	patz1	99	67.833	ENSACIG00000016779	patz1	100	70.037	Amphilophus_citrinellus
ENSIPUG00000017653	patz1	99	67.611	ENSAPEG00000013354	patz1	100	67.611	Amphiprion_percula
ENSIPUG00000017653	patz1	99	67.815	ENSATEG00000011260	patz1	100	67.815	Anabas_testudineus
ENSIPUG00000017653	patz1	87	53.257	ENSAPLG00000003934	PATZ1	99	53.257	Anas_platyrhynchos
ENSIPUG00000017653	patz1	97	53.748	ENSANAG00000029603	PATZ1	97	60.285	Aotus_nancymaae
ENSIPUG00000017653	patz1	99	77.992	ENSAMXG00000002273	patz1	100	85.526	Astyanax_mexicanus
ENSIPUG00000017653	patz1	97	59.756	ENSBTAG00000005478	PATZ1	97	60.285	Bos_taurus
ENSIPUG00000017653	patz1	97	53.748	ENSCJAG00000010978	PATZ1	97	60.285	Callithrix_jacchus
ENSIPUG00000017653	patz1	97	59.756	ENSCAFG00000013087	PATZ1	96	60.285	Canis_familiaris
ENSIPUG00000017653	patz1	97	59.878	ENSCHIG00000020203	PATZ1	97	60.285	Capra_hircus
ENSIPUG00000017653	patz1	97	54.054	ENSTSYG00000033183	PATZ1	97	60.285	Carlito_syrichta
ENSIPUG00000017653	patz1	97	53.748	ENSCCAG00000028772	PATZ1	97	60.285	Cebus_capucinus
ENSIPUG00000017653	patz1	97	54.096	ENSCATG00000006101	PATZ1	97	60.285	Cercocebus_atys
ENSIPUG00000017653	patz1	99	53.408	ENSCPBG00000011277	PATZ1	99	57.089	Chrysemys_picta_bellii
ENSIPUG00000017653	patz1	97	54.096	ENSCANG00000024972	PATZ1	97	60.285	Colobus_angolensis_palliatus
ENSIPUG00000017653	patz1	97	52.528	ENSCGRG00001004071	Patz1	97	58.266	Cricetulus_griseus_chok1gshd
ENSIPUG00000017653	patz1	92	51.906	ENSCGRG00000004814	Patz1	99	57.725	Cricetulus_griseus_crigri
ENSIPUG00000017653	patz1	99	56.685	ENSCSEG00000001385	patz1	97	67.593	Cynoglossus_semilaevis
ENSIPUG00000017653	patz1	99	68.762	ENSCVAG00000007684	patz1	100	64.750	Cyprinodon_variegatus
ENSIPUG00000017653	patz1	99	76.164	ENSDARG00000076584	patz1	100	76.164	Danio_rerio
ENSIPUG00000017653	patz1	89	59.630	ENSDNOG00000003183	PATZ1	98	52.582	Dasypus_novemcinctus
ENSIPUG00000017653	patz1	97	59.959	ENSDORG00000023834	Patz1	97	60.489	Dipodomys_ordii
ENSIPUG00000017653	patz1	97	53.901	ENSECAG00000025030	PATZ1	97	60.285	Equus_caballus
ENSIPUG00000017653	patz1	99	70.040	ENSELUG00000002333	patz1	100	70.040	Esox_lucius
ENSIPUG00000017653	patz1	97	59.756	ENSFCAG00000030253	PATZ1	97	60.285	Felis_catus
ENSIPUG00000017653	patz1	87	53.560	ENSFALG00000007450	PATZ1	99	53.560	Ficedula_albicollis
ENSIPUG00000017653	patz1	96	50.505	ENSFDAG00000005614	PATZ1	99	50.938	Fukomys_damarensis
ENSIPUG00000017653	patz1	99	61.974	ENSFHEG00000014755	patz1	100	68.367	Fundulus_heteroclitus
ENSIPUG00000017653	patz1	98	58.714	ENSGMOG00000001062	patz1	99	58.368	Gadus_morhua
ENSIPUG00000017653	patz1	99	53.241	ENSGALG00000006934	PATZ1	99	53.655	Gallus_gallus
ENSIPUG00000017653	patz1	99	67.742	ENSGAFG00000010053	patz1	100	67.742	Gambusia_affinis
ENSIPUG00000017653	patz1	87	53.181	ENSGAGG00000003214	PATZ1	99	57.210	Gopherus_agassizii
ENSIPUG00000017653	patz1	97	53.748	ENSGGOG00000017171	PATZ1	97	60.285	Gorilla_gorilla
ENSIPUG00000017653	patz1	99	68.465	ENSHCOG00000017644	patz1	99	66.131	Hippocampus_comes
ENSIPUG00000017653	patz1	97	59.756	ENSSTOG00000020707	PATZ1	97	60.285	Ictidomys_tridecemlineatus
ENSIPUG00000017653	patz1	97	59.036	ENSJJAG00000015259	Patz1	97	59.438	Jaculus_jaculus
ENSIPUG00000017653	patz1	99	59.033	ENSKMAG00000008157	patz1	99	69.963	Kryptolebias_marmoratus
ENSIPUG00000017653	patz1	97	61.364	ENSLAFG00000002317	PATZ1	97	55.108	Loxodonta_africana
ENSIPUG00000017653	patz1	97	54.096	ENSMFAG00000040968	PATZ1	97	60.285	Macaca_fascicularis
ENSIPUG00000017653	patz1	97	54.096	ENSMNEG00000037588	PATZ1	97	60.285	Macaca_nemestrina
ENSIPUG00000017653	patz1	97	54.096	ENSMLEG00000030938	PATZ1	97	60.285	Mandrillus_leucophaeus
ENSIPUG00000017653	patz1	99	67.814	ENSMAMG00000023652	patz1	100	67.814	Mastacembelus_armatus
ENSIPUG00000017653	patz1	87	50.244	ENSMGAG00000008439	PATZ1	99	50.244	Meleagris_gallopavo
ENSIPUG00000017653	patz1	97	53.792	ENSMAUG00000004129	Patz1	97	60.081	Mesocricetus_auratus
ENSIPUG00000017653	patz1	97	53.901	ENSMICG00000005430	PATZ1	97	60.285	Microcebus_murinus
ENSIPUG00000017653	patz1	97	53.890	ENSMOCG00000014488	Patz1	97	60.285	Microtus_ochrogaster
ENSIPUG00000017653	patz1	99	64.634	ENSMMOG00000021679	patz1	100	64.634	Mola_mola
ENSIPUG00000017653	patz1	99	68.714	ENSMALG00000021172	patz1	100	68.313	Monopterus_albus
ENSIPUG00000017653	patz1	97	54.031	MGP_CAROLIEiJ_G0016007	Patz1	97	60.489	Mus_caroli
ENSIPUG00000017653	patz1	97	53.890	ENSMUSG00000020453	Patz1	97	60.489	Mus_musculus
ENSIPUG00000017653	patz1	97	53.890	MGP_PahariEiJ_G0016884	Patz1	97	60.489	Mus_pahari
ENSIPUG00000017653	patz1	97	53.890	MGP_SPRETEiJ_G0016846	Patz1	97	60.489	Mus_spretus
ENSIPUG00000017653	patz1	97	60.041	ENSMLUG00000009942	PATZ1	97	60.285	Myotis_lucifugus
ENSIPUG00000017653	patz1	97	53.748	ENSNGAG00000010268	Patz1	97	60.285	Nannospalax_galili
ENSIPUG00000017653	patz1	99	67.833	ENSNBRG00000016032	patz1	100	67.833	Neolamprologus_brichardi
ENSIPUG00000017653	patz1	73	61.094	ENSMEUG00000016293	PATZ1	96	53.975	Notamacropus_eugenii
ENSIPUG00000017653	patz1	97	54.184	ENSODEG00000003589	PATZ1	97	60.692	Octodon_degus
ENSIPUG00000017653	patz1	99	68.008	ENSONIG00000004248	patz1	100	68.008	Oreochromis_niloticus
ENSIPUG00000017653	patz1	97	53.617	ENSOANG00000014654	PATZ1	97	54.043	Ornithorhynchus_anatinus
ENSIPUG00000017653	patz1	99	68.672	ENSORLG00020010937	patz1	100	68.672	Oryzias_latipes_hni
ENSIPUG00000017653	patz1	99	66.802	ENSORLG00015007396	patz1	100	66.802	Oryzias_latipes_hsok
ENSIPUG00000017653	patz1	99	67.339	ENSOMEG00000006636	patz1	100	67.339	Oryzias_melastigma
ENSIPUG00000017653	patz1	97	54.054	ENSOGAG00000027905	PATZ1	97	54.339	Otolemur_garnettii
ENSIPUG00000017653	patz1	97	53.748	ENSPPAG00000033227	PATZ1	97	60.285	Pan_paniscus
ENSIPUG00000017653	patz1	97	59.756	ENSPPRG00000001573	PATZ1	97	60.285	Panthera_pardus
ENSIPUG00000017653	patz1	88	59.823	ENSPTIG00000007937	PATZ1	90	52.970	Panthera_tigris_altaica
ENSIPUG00000017653	patz1	97	53.748	ENSPTRG00000014268	PATZ1	97	60.285	Pan_troglodytes
ENSIPUG00000017653	patz1	97	54.096	ENSPANG00000006821	PATZ1	96	60.285	Papio_anubis
ENSIPUG00000017653	patz1	99	64.015	ENSPKIG00000019584	patz1	100	67.520	Paramormyrops_kingsleyae
ENSIPUG00000017653	patz1	65	71.831	ENSPSIG00000011562	-	99	71.831	Pelodiscus_sinensis
ENSIPUG00000017653	patz1	50	59.055	ENSPSIG00000016553	-	86	59.055	Pelodiscus_sinensis
ENSIPUG00000017653	patz1	99	60.801	ENSPMGG00000010196	patz1	100	60.801	Periophthalmus_magnuspinnatus
ENSIPUG00000017653	patz1	97	53.890	ENSPEMG00000005321	Patz1	97	60.285	Peromyscus_maniculatus_bairdii
ENSIPUG00000017653	patz1	99	67.944	ENSPLAG00000010425	patz1	100	68.219	Poecilia_latipinna
ENSIPUG00000017653	patz1	99	67.944	ENSPMEG00000000255	patz1	100	68.219	Poecilia_mexicana
ENSIPUG00000017653	patz1	99	61.538	ENSPREG00000002440	patz1	100	61.711	Poecilia_reticulata
ENSIPUG00000017653	patz1	97	53.901	ENSPPYG00000011732	PATZ1	97	54.043	Pongo_abelii
ENSIPUG00000017653	patz1	97	53.901	ENSPCOG00000019729	PATZ1	97	60.285	Propithecus_coquereli
ENSIPUG00000017653	patz1	97	59.630	ENSPVAG00000001749	PATZ1	97	54.184	Pteropus_vampyrus
ENSIPUG00000017653	patz1	99	68.283	ENSPNYG00000013542	patz1	100	68.283	Pundamilia_nyererei
ENSIPUG00000017653	patz1	87	67.468	ENSPNAG00000017222	patz1	100	67.468	Pygocentrus_nattereri
ENSIPUG00000017653	patz1	97	54.096	ENSRBIG00000044231	PATZ1	97	60.285	Rhinopithecus_bieti
ENSIPUG00000017653	patz1	97	54.096	ENSRROG00000037155	PATZ1	97	60.285	Rhinopithecus_roxellana
ENSIPUG00000017653	patz1	97	53.748	ENSSBOG00000003894	PATZ1	97	60.285	Saimiri_boliviensis_boliviensis
ENSIPUG00000017653	patz1	77	91.304	ENSSFOG00015013244	patz1	78	91.304	Scleropages_formosus
ENSIPUG00000017653	patz1	97	58.182	ENSSPUG00000015298	PATZ1	95	56.757	Sphenodon_punctatus
ENSIPUG00000017653	patz1	88	59.688	ENSSSCG00000010027	PATZ1	99	60.000	Sus_scrofa
ENSIPUG00000017653	patz1	99	63.624	ENSTRUG00000015366	patz1	100	63.624	Takifugu_rubripes
ENSIPUG00000017653	patz1	97	59.444	ENSTTRG00000010279	PATZ1	97	54.043	Tursiops_truncatus
ENSIPUG00000017653	patz1	97	59.756	ENSUAMG00000015014	PATZ1	97	60.285	Ursus_americanus
ENSIPUG00000017653	patz1	98	57.765	ENSXETG00000004190	patz1	98	52.941	Xenopus_tropicalis
ENSIPUG00000017653	patz1	99	68.145	ENSXMAG00000015531	patz1	100	68.145	Xiphophorus_maculatus