EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000017828 (Gene tree)
Gene ID: 108276807
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6867 bases
Position: chr16:20701690-20708556
Accession: 108276807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000026351	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000027433	-	3183	XM_017488793	ENSIPUP00000026351	459 (aa)	XP_017344282	A0A2D0SPS5

Gene Model

Click here to download ENSIPUG00000017828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017828	htatsf1	76	64.754	ENSG00000102241	HTATSF1	100	59.914	Homo_sapiens
ENSIPUG00000017828	htatsf1	99	66.596	ENSAPOG00000009823	htatsf1	99	65.116	Acanthochromis_polyacanthus
ENSIPUG00000017828	htatsf1	100	66.316	ENSACIG00000020459	htatsf1	99	64.706	Amphilophus_citrinellus
ENSIPUG00000017828	htatsf1	99	65.466	ENSAOCG00000020994	htatsf1	99	66.176	Amphiprion_ocellaris
ENSIPUG00000017828	htatsf1	99	65.116	ENSAPEG00000016432	htatsf1	99	65.474	Amphiprion_percula
ENSIPUG00000017828	htatsf1	92	67.273	ENSATEG00000008903	htatsf1	95	68.571	Anabas_testudineus
ENSIPUG00000017828	htatsf1	92	60.514	ENSAPLG00000012401	HTATSF1	84	68.391	Anas_platyrhynchos
ENSIPUG00000017828	htatsf1	73	65.306	ENSACAG00000009346	HTATSF1	87	65.306	Anolis_carolinensis
ENSIPUG00000017828	htatsf1	99	66.806	ENSACLG00000008096	htatsf1	99	65.828	Astatotilapia_calliptera
ENSIPUG00000017828	htatsf1	100	69.729	ENSAMXG00000008387	htatsf1	100	70.309	Astyanax_mexicanus
ENSIPUG00000017828	htatsf1	80	64.021	ENSBTAG00000032711	HTATSF1	51	63.588	Bos_taurus
ENSIPUG00000017828	htatsf1	67	41.456	WBGene00022025	Y65B4A.1	75	39.535	Caenorhabditis_elegans
ENSIPUG00000017828	htatsf1	80	65.092	ENSCAFG00000023294	HTATSF1	50	64.474	Canis_familiaris
ENSIPUG00000017828	htatsf1	75	64.525	ENSCCAG00000025329	-	54	64.628	Cebus_capucinus
ENSIPUG00000017828	htatsf1	99	59.698	ENSCPBG00000026092	HTATSF1	99	59.698	Chrysemys_picta_bellii
ENSIPUG00000017828	htatsf1	76	48.725	ENSCING00000005914	-	85	48.305	Ciona_intestinalis
ENSIPUG00000017828	htatsf1	81	46.398	ENSCSAVG00000000371	-	89	46.110	Ciona_savignyi
ENSIPUG00000017828	htatsf1	99	65.042	ENSCVAG00000014070	htatsf1	98	64.286	Cyprinodon_variegatus
ENSIPUG00000017828	htatsf1	99	69.099	ENSDARG00000056649	htatsf1	85	77.165	Danio_rerio
ENSIPUG00000017828	htatsf1	75	44.915	FBgn0037081	barc	64	44.847	Drosophila_melanogaster
ENSIPUG00000017828	htatsf1	88	54.884	ENSEBUG00000001534	htatsf1	86	54.651	Eptatretus_burgeri
ENSIPUG00000017828	htatsf1	99	62.796	ENSELUG00000005486	htatsf1	90	64.530	Esox_lucius
ENSIPUG00000017828	htatsf1	80	63.684	ENSFCAG00000031924	HTATSF1	61	54.545	Felis_catus
ENSIPUG00000017828	htatsf1	100	59.236	ENSFALG00000003728	HTATSF1	85	66.839	Ficedula_albicollis
ENSIPUG00000017828	htatsf1	99	65.612	ENSFHEG00000020286	htatsf1	99	64.286	Fundulus_heteroclitus
ENSIPUG00000017828	htatsf1	76	73.315	ENSGMOG00000016444	htatsf1	100	71.910	Gadus_morhua
ENSIPUG00000017828	htatsf1	100	60.515	ENSGALG00000006410	HTATSF1	86	67.617	Gallus_gallus
ENSIPUG00000017828	htatsf1	99	65.042	ENSGAFG00000003041	htatsf1	98	64.842	Gambusia_affinis
ENSIPUG00000017828	htatsf1	99	66.170	ENSGACG00000020459	htatsf1	99	64.756	Gasterosteus_aculeatus
ENSIPUG00000017828	htatsf1	99	66.806	ENSHBUG00000004392	htatsf1	99	65.828	Haplochromis_burtoni
ENSIPUG00000017828	htatsf1	80	63.517	ENSHGLG00000005328	HTATSF1	50	63.351	Heterocephalus_glaber_female
ENSIPUG00000017828	htatsf1	80	70.649	ENSHCOG00000009056	htatsf1	88	71.579	Hippocampus_comes
ENSIPUG00000017828	htatsf1	76	64.738	ENSSTOG00000012505	HTATSF1	51	64.474	Ictidomys_tridecemlineatus
ENSIPUG00000017828	htatsf1	99	67.300	ENSKMAG00000007622	htatsf1	99	64.842	Kryptolebias_marmoratus
ENSIPUG00000017828	htatsf1	99	65.393	ENSLBEG00000001154	htatsf1	99	64.392	Labrus_bergylta
ENSIPUG00000017828	htatsf1	99	59.529	ENSLACG00000015989	HTATSF1	99	58.155	Latimeria_chalumnae
ENSIPUG00000017828	htatsf1	99	46.512	ENSLOCG00000015118	htatsf1	99	46.170	Lepisosteus_oculatus
ENSIPUG00000017828	htatsf1	80	64.450	ENSLAFG00000014307	HTATSF1	55	64.211	Loxodonta_africana
ENSIPUG00000017828	htatsf1	76	64.754	ENSMNEG00000024084	HTATSF1	55	64.398	Macaca_nemestrina
ENSIPUG00000017828	htatsf1	87	70.913	ENSMAMG00000021225	htatsf1	99	64.693	Mastacembelus_armatus
ENSIPUG00000017828	htatsf1	99	66.806	ENSMZEG00005000485	htatsf1	99	65.828	Maylandia_zebra
ENSIPUG00000017828	htatsf1	95	60.497	ENSMGAG00000003558	HTATSF1	85	68.044	Meleagris_gallopavo
ENSIPUG00000017828	htatsf1	80	64.829	ENSMAUG00000007235	Htatsf1	50	64.136	Mesocricetus_auratus
ENSIPUG00000017828	htatsf1	96	55.437	ENSMICG00000009348	HTATSF1	58	57.014	Microcebus_murinus
ENSIPUG00000017828	htatsf1	76	65.746	ENSMOCG00000023007	-	50	65.879	Microtus_ochrogaster
ENSIPUG00000017828	htatsf1	99	64.905	ENSMMOG00000011013	htatsf1	90	70.896	Mola_mola
ENSIPUG00000017828	htatsf1	51	64.777	ENSMODG00000000199	-	91	62.719	Monodelphis_domestica
ENSIPUG00000017828	htatsf1	99	60.430	ENSMODG00000014087	-	84	67.979	Monodelphis_domestica
ENSIPUG00000017828	htatsf1	99	64.017	ENSMALG00000019977	htatsf1	99	64.017	Monopterus_albus
ENSIPUG00000017828	htatsf1	76	64.088	MGP_CAROLIEiJ_G0033094	Htatsf1	50	64.286	Mus_caroli
ENSIPUG00000017828	htatsf1	76	64.167	ENSMUSG00000067873	Htatsf1	50	64.116	Mus_musculus
ENSIPUG00000017828	htatsf1	76	64.365	MGP_SPRETEiJ_G0034249	Htatsf1	50	64.304	Mus_spretus
ENSIPUG00000017828	htatsf1	79	64.247	ENSMLUG00000009234	-	51	63.243	Myotis_lucifugus
ENSIPUG00000017828	htatsf1	76	64.820	ENSNGAG00000017831	Htatsf1	51	65.000	Nannospalax_galili
ENSIPUG00000017828	htatsf1	99	66.387	ENSNBRG00000003818	htatsf1	99	65.618	Neolamprologus_brichardi
ENSIPUG00000017828	htatsf1	79	67.914	ENSMEUG00000004133	-	89	68.011	Notamacropus_eugenii
ENSIPUG00000017828	htatsf1	99	66.388	ENSONIG00000008638	htatsf1	99	65.199	Oreochromis_niloticus
ENSIPUG00000017828	htatsf1	92	59.338	ENSOANG00000011674	-	98	59.382	Ornithorhynchus_anatinus
ENSIPUG00000017828	htatsf1	99	63.002	ENSORLG00000002356	htatsf1	99	61.667	Oryzias_latipes
ENSIPUG00000017828	htatsf1	99	62.869	ENSORLG00020017818	htatsf1	96	62.368	Oryzias_latipes_hni
ENSIPUG00000017828	htatsf1	99	62.288	ENSORLG00015002268	htatsf1	99	61.795	Oryzias_latipes_hsok
ENSIPUG00000017828	htatsf1	99	63.983	ENSOMEG00000007564	htatsf1	99	63.636	Oryzias_melastigma
ENSIPUG00000017828	htatsf1	95	55.699	ENSOGAG00000005565	HTATSF1	56	57.306	Otolemur_garnettii
ENSIPUG00000017828	htatsf1	80	64.211	ENSPPRG00000014209	HTATSF1	50	63.852	Panthera_pardus
ENSIPUG00000017828	htatsf1	99	66.522	ENSPKIG00000024852	htatsf1	99	65.510	Paramormyrops_kingsleyae
ENSIPUG00000017828	htatsf1	76	63.456	ENSPSIG00000010192	HTATSF1	94	63.456	Pelodiscus_sinensis
ENSIPUG00000017828	htatsf1	100	61.216	ENSPMGG00000006172	htatsf1	100	60.168	Periophthalmus_magnuspinnatus
ENSIPUG00000017828	htatsf1	79	64.499	ENSPCIG00000018896	-	84	63.342	Phascolarctos_cinereus
ENSIPUG00000017828	htatsf1	79	68.182	ENSPCIG00000030173	-	86	68.182	Phascolarctos_cinereus
ENSIPUG00000017828	htatsf1	99	66.808	ENSPFOG00000007871	htatsf1	96	65.116	Poecilia_formosa
ENSIPUG00000017828	htatsf1	99	67.161	ENSPLAG00000007532	htatsf1	99	65.401	Poecilia_latipinna
ENSIPUG00000017828	htatsf1	99	66.385	ENSPMEG00000000352	htatsf1	99	64.905	Poecilia_mexicana
ENSIPUG00000017828	htatsf1	99	65.890	ENSPREG00000007811	htatsf1	99	66.316	Poecilia_reticulata
ENSIPUG00000017828	htatsf1	96	52.110	ENSPCAG00000010576	HTATSF1	51	59.030	Procavia_capensis
ENSIPUG00000017828	htatsf1	76	64.738	ENSPCOG00000021823	HTATSF1	50	64.644	Propithecus_coquereli
ENSIPUG00000017828	htatsf1	80	64.908	ENSPVAG00000010281	HTATSF1	54	63.757	Pteropus_vampyrus
ENSIPUG00000017828	htatsf1	99	66.806	ENSPNYG00000016693	htatsf1	99	65.828	Pundamilia_nyererei
ENSIPUG00000017828	htatsf1	100	71.605	ENSPNAG00000006166	htatsf1	100	71.166	Pygocentrus_nattereri
ENSIPUG00000017828	htatsf1	75	64.722	ENSSBOG00000027186	-	50	64.456	Saimiri_boliviensis_boliviensis
ENSIPUG00000017828	htatsf1	79	68.633	ENSSHAG00000018908	-	82	68.011	Sarcophilus_harrisii
ENSIPUG00000017828	htatsf1	80	67.380	ENSSHAG00000006440	-	97	67.112	Sarcophilus_harrisii
ENSIPUG00000017828	htatsf1	99	64.871	ENSSFOG00015012002	htatsf1	87	70.781	Scleropages_formosus
ENSIPUG00000017828	htatsf1	99	66.453	ENSSMAG00000002970	htatsf1	99	65.319	Scophthalmus_maximus
ENSIPUG00000017828	htatsf1	77	74.255	ENSSDUG00000020002	htatsf1	88	74.255	Seriola_dumerili
ENSIPUG00000017828	htatsf1	99	65.466	ENSSLDG00000016880	htatsf1	99	64.693	Seriola_lalandi_dorsalis
ENSIPUG00000017828	htatsf1	83	58.763	ENSSARG00000005193	HTATSF1	53	58.549	Sorex_araneus
ENSIPUG00000017828	htatsf1	99	59.395	ENSSPUG00000014767	HTATSF1	83	67.553	Sphenodon_punctatus
ENSIPUG00000017828	htatsf1	99	65.254	ENSSPAG00000000732	htatsf1	99	65.254	Stegastes_partitus
ENSIPUG00000017828	htatsf1	76	64.463	ENSSSCG00000023062	HTATSF1	55	64.380	Sus_scrofa
ENSIPUG00000017828	htatsf1	99	60.129	ENSTGUG00000002099	HTATSF1	85	67.016	Taeniopygia_guttata
ENSIPUG00000017828	htatsf1	99	65.042	ENSTRUG00000013383	htatsf1	92	71.144	Takifugu_rubripes
ENSIPUG00000017828	htatsf1	99	64.407	ENSTNIG00000016140	htatsf1	99	63.002	Tetraodon_nigroviridis
ENSIPUG00000017828	htatsf1	92	55.752	ENSTTRG00000002269	HTATSF1	72	55.944	Tursiops_truncatus
ENSIPUG00000017828	htatsf1	80	64.211	ENSUAMG00000012048	HTATSF1	50	63.852	Ursus_americanus
ENSIPUG00000017828	htatsf1	80	66.839	ENSXETG00000019749	htatsf1	77	64.461	Xenopus_tropicalis
ENSIPUG00000017828	htatsf1	99	60.887	ENSXCOG00000006912	htatsf1	97	71.845	Xiphophorus_couchianus
ENSIPUG00000017828	htatsf1	99	67.100	ENSXMAG00000000490	htatsf1	99	67.527	Xiphophorus_maculatus