EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000018011 (Gene tree)
Gene ID: 108268801
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12803 bases
Position: chr8:6025395-6038197
Accession: 108268801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000026602	MTS	PF05175.14	6e-05	1	1
ENSIPUP00000026602	Met_10	PF02475.16	3.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000027695	-	2771	XM_017474000	ENSIPUP00000026602	442 (aa)	XP_017329489	A0A2D0RG28

Gene Model

Click here to download ENSIPUG00000018011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018011	trmt12	89	51.442	ENSG00000183665	TRMT12	93	51.442	Homo_sapiens
ENSIPUG00000018011	trmt12	92	57.317	ENSAPOG00000011979	trmt12	99	57.317	Acanthochromis_polyacanthus
ENSIPUG00000018011	trmt12	91	52.471	ENSAMEG00000019612	TRMT12	95	52.471	Ailuropoda_melanoleuca
ENSIPUG00000018011	trmt12	88	56.888	ENSACIG00000012982	trmt12	99	56.888	Amphilophus_citrinellus
ENSIPUG00000018011	trmt12	92	56.585	ENSAOCG00000020570	trmt12	99	57.841	Amphiprion_ocellaris
ENSIPUG00000018011	trmt12	92	57.317	ENSAPEG00000006335	trmt12	99	58.612	Amphiprion_percula
ENSIPUG00000018011	trmt12	92	58.293	ENSATEG00000018316	trmt12	99	58.293	Anabas_testudineus
ENSIPUG00000018011	trmt12	92	55.854	ENSACLG00000001008	trmt12	99	55.854	Astatotilapia_calliptera
ENSIPUG00000018011	trmt12	92	70.379	ENSAMXG00000040366	trmt12	100	70.379	Astyanax_mexicanus
ENSIPUG00000018011	trmt12	91	51.179	ENSBTAG00000020398	TRMT12	92	51.179	Bos_taurus
ENSIPUG00000018011	trmt12	52	39.224	WBGene00009586	F40F9.10	50	39.224	Caenorhabditis_elegans
ENSIPUG00000018011	trmt12	91	49.882	ENSCJAG00000022174	TRMT12	95	49.882	Callithrix_jacchus
ENSIPUG00000018011	trmt12	91	51.765	ENSCAFG00000001040	TRMT12	97	51.765	Canis_familiaris
ENSIPUG00000018011	trmt12	91	51.765	ENSCAFG00020006500	TRMT12	97	51.765	Canis_lupus_dingo
ENSIPUG00000018011	trmt12	89	51.683	ENSCHIG00000016574	TRMT12	95	51.683	Capra_hircus
ENSIPUG00000018011	trmt12	91	51.185	ENSCPOG00000026520	TRMT12	95	51.185	Cavia_porcellus
ENSIPUG00000018011	trmt12	91	50.353	ENSCSAG00000018615	TRMT12	95	50.353	Chlorocebus_sabaeus
ENSIPUG00000018011	trmt12	91	47.248	ENSCPBG00000014290	TRMT12	95	47.248	Chrysemys_picta_bellii
ENSIPUG00000018011	trmt12	67	46.154	ENSCING00000019633	-	97	46.154	Ciona_intestinalis
ENSIPUG00000018011	trmt12	68	48.000	ENSCSAVG00000000415	-	92	48.000	Ciona_savignyi
ENSIPUG00000018011	trmt12	91	48.551	ENSCGRG00001014834	Trmt12	97	48.551	Cricetulus_griseus_chok1gshd
ENSIPUG00000018011	trmt12	92	54.745	ENSCSEG00000002675	trmt12	95	54.745	Cynoglossus_semilaevis
ENSIPUG00000018011	trmt12	92	56.068	ENSCVAG00000005590	trmt12	99	56.068	Cyprinodon_variegatus
ENSIPUG00000018011	trmt12	92	66.019	ENSDARG00000060338	trmt12	99	67.616	Danio_rerio
ENSIPUG00000018011	trmt12	94	49.199	ENSETEG00000009373	TRMT12	97	49.199	Echinops_telfairi
ENSIPUG00000018011	trmt12	91	52.123	ENSEASG00005022441	TRMT12	97	52.123	Equus_asinus_asinus
ENSIPUG00000018011	trmt12	91	49.645	ENSEEUG00000004844	TRMT12	95	49.645	Erinaceus_europaeus
ENSIPUG00000018011	trmt12	92	56.934	ENSELUG00000004240	trmt12	100	58.311	Esox_lucius
ENSIPUG00000018011	trmt12	61	56.537	ENSFALG00000003825	TRMT12	93	63.235	Ficedula_albicollis
ENSIPUG00000018011	trmt12	91	50.467	ENSFDAG00000016647	TRMT12	96	50.467	Fukomys_damarensis
ENSIPUG00000018011	trmt12	86	47.532	ENSFHEG00000017338	trmt12	96	47.532	Fundulus_heteroclitus
ENSIPUG00000018011	trmt12	76	53.125	ENSGALG00000006773	TRMT12	77	53.125	Gallus_gallus
ENSIPUG00000018011	trmt12	92	55.392	ENSGAFG00000020056	trmt12	99	55.392	Gambusia_affinis
ENSIPUG00000018011	trmt12	88	56.091	ENSGACG00000017351	trmt12	100	56.091	Gasterosteus_aculeatus
ENSIPUG00000018011	trmt12	91	49.192	ENSGAGG00000006032	TRMT12	98	49.192	Gopherus_agassizii
ENSIPUG00000018011	trmt12	92	55.854	ENSHBUG00000016412	trmt12	99	55.854	Haplochromis_burtoni
ENSIPUG00000018011	trmt12	91	50.704	ENSHGLG00000020498	TRMT12	96	50.704	Heterocephalus_glaber_female
ENSIPUG00000018011	trmt12	91	51.059	ENSHGLG00100020132	TRMT12	96	51.059	Heterocephalus_glaber_male
ENSIPUG00000018011	trmt12	92	53.431	ENSHCOG00000005050	trmt12	96	58.284	Hippocampus_comes
ENSIPUG00000018011	trmt12	89	50.957	ENSSTOG00000030617	TRMT12	96	50.353	Ictidomys_tridecemlineatus
ENSIPUG00000018011	trmt12	92	57.178	ENSKMAG00000000891	trmt12	100	57.178	Kryptolebias_marmoratus
ENSIPUG00000018011	trmt12	92	57.457	ENSLBEG00000028712	trmt12	100	57.457	Labrus_bergylta
ENSIPUG00000018011	trmt12	50	66.368	ENSLBEG00000017456	-	87	66.667	Labrus_bergylta
ENSIPUG00000018011	trmt12	91	51.168	ENSLACG00000015869	TRMT12	96	51.168	Latimeria_chalumnae
ENSIPUG00000018011	trmt12	91	53.186	ENSLOCG00000015290	trmt12	99	53.186	Lepisosteus_oculatus
ENSIPUG00000018011	trmt12	91	51.294	ENSLAFG00000012519	TRMT12	97	51.294	Loxodonta_africana
ENSIPUG00000018011	trmt12	91	50.353	ENSMMUG00000015490	TRMT12	95	50.353	Macaca_mulatta
ENSIPUG00000018011	trmt12	92	58.454	ENSMAMG00000020311	trmt12	99	58.454	Mastacembelus_armatus
ENSIPUG00000018011	trmt12	92	55.610	ENSMZEG00005007349	trmt12	99	55.610	Maylandia_zebra
ENSIPUG00000018011	trmt12	95	48.624	ENSMGAG00000004174	TRMT12	99	48.624	Meleagris_gallopavo
ENSIPUG00000018011	trmt12	92	56.341	ENSMMOG00000000412	trmt12	99	56.341	Mola_mola
ENSIPUG00000018011	trmt12	91	49.029	ENSMODG00000021403	-	94	49.029	Monodelphis_domestica
ENSIPUG00000018011	trmt12	94	48.706	ENSMODG00000011798	-	89	48.706	Monodelphis_domestica
ENSIPUG00000018011	trmt12	92	57.805	ENSMALG00000008668	trmt12	99	57.805	Monopterus_albus
ENSIPUG00000018011	trmt12	91	49.882	MGP_CAROLIEiJ_G0019820	Trmt12	95	49.882	Mus_caroli
ENSIPUG00000018011	trmt12	91	50.236	ENSMUSG00000037085	Trmt12	95	50.236	Mus_musculus
ENSIPUG00000018011	trmt12	91	49.882	MGP_PahariEiJ_G0019829	Trmt12	95	49.882	Mus_pahari
ENSIPUG00000018011	trmt12	91	50.000	MGP_SPRETEiJ_G0020717	Trmt12	95	50.000	Mus_spretus
ENSIPUG00000018011	trmt12	91	50.472	ENSMPUG00000019150	TRMT12	95	50.472	Mustela_putorius_furo
ENSIPUG00000018011	trmt12	91	52.235	ENSMLUG00000003753	TRMT12	97	52.235	Myotis_lucifugus
ENSIPUG00000018011	trmt12	91	50.353	ENSNGAG00000014548	Trmt12	97	50.353	Nannospalax_galili
ENSIPUG00000018011	trmt12	92	55.961	ENSNBRG00000021510	trmt12	99	55.961	Neolamprologus_brichardi
ENSIPUG00000018011	trmt12	95	47.738	ENSOPRG00000008067	TRMT12	98	47.738	Ochotona_princeps
ENSIPUG00000018011	trmt12	91	49.882	ENSODEG00000018933	TRMT12	96	49.882	Octodon_degus
ENSIPUG00000018011	trmt12	92	57.073	ENSONIG00000002614	trmt12	99	57.073	Oreochromis_niloticus
ENSIPUG00000018011	trmt12	91	47.494	ENSOANG00000009987	TRMT12	98	47.494	Ornithorhynchus_anatinus
ENSIPUG00000018011	trmt12	91	48.357	ENSOCUG00000026379	TRMT12	95	48.357	Oryctolagus_cuniculus
ENSIPUG00000018011	trmt12	92	56.650	ENSORLG00000001280	trmt12	99	56.650	Oryzias_latipes
ENSIPUG00000018011	trmt12	92	56.158	ENSORLG00020000708	trmt12	99	56.158	Oryzias_latipes_hni
ENSIPUG00000018011	trmt12	92	56.158	ENSORLG00015012344	trmt12	99	56.158	Oryzias_latipes_hsok
ENSIPUG00000018011	trmt12	92	54.433	ENSOMEG00000015267	trmt12	98	54.433	Oryzias_melastigma
ENSIPUG00000018011	trmt12	91	50.708	ENSOGAG00000015845	TRMT12	97	50.708	Otolemur_garnettii
ENSIPUG00000018011	trmt12	92	58.293	ENSPKIG00000004640	trmt12	99	58.293	Paramormyrops_kingsleyae
ENSIPUG00000018011	trmt12	55	56.506	ENSPSIG00000003476	TRMT12	99	56.506	Pelodiscus_sinensis
ENSIPUG00000018011	trmt12	92	54.657	ENSPMGG00000016356	trmt12	97	54.657	Periophthalmus_magnuspinnatus
ENSIPUG00000018011	trmt12	93	48.219	ENSPCIG00000002967	TRMT12	89	48.219	Phascolarctos_cinereus
ENSIPUG00000018011	trmt12	92	52.184	ENSPFOG00000016931	trmt12	99	52.184	Poecilia_formosa
ENSIPUG00000018011	trmt12	92	54.258	ENSPLAG00000020621	trmt12	99	54.258	Poecilia_latipinna
ENSIPUG00000018011	trmt12	92	53.790	ENSPMEG00000000818	trmt12	99	53.790	Poecilia_mexicana
ENSIPUG00000018011	trmt12	92	54.433	ENSPREG00000011621	trmt12	99	54.680	Poecilia_reticulata
ENSIPUG00000018011	trmt12	91	51.408	ENSPPYG00000018866	TRMT12	95	51.408	Pongo_abelii
ENSIPUG00000018011	trmt12	91	50.472	ENSPCAG00000000556	TRMT12	95	50.472	Procavia_capensis
ENSIPUG00000018011	trmt12	91	50.704	ENSPVAG00000009149	TRMT12	95	50.704	Pteropus_vampyrus
ENSIPUG00000018011	trmt12	88	55.867	ENSPNYG00000010696	trmt12	99	55.867	Pundamilia_nyererei
ENSIPUG00000018011	trmt12	92	70.309	ENSPNAG00000019028	trmt12	100	70.309	Pygocentrus_nattereri
ENSIPUG00000018011	trmt12	91	51.529	ENSRNOG00000008978	Trmt12	97	51.529	Rattus_norvegicus
ENSIPUG00000018011	trmt12	94	48.122	ENSSHAG00000003345	TRMT12	97	48.122	Sarcophilus_harrisii
ENSIPUG00000018011	trmt12	92	54.048	ENSSFOG00015006090	trmt12	99	54.048	Scleropages_formosus
ENSIPUG00000018011	trmt12	92	58.049	ENSSMAG00000013247	trmt12	99	58.049	Scophthalmus_maximus
ENSIPUG00000018011	trmt12	92	59.024	ENSSDUG00000006168	trmt12	99	59.024	Seriola_dumerili
ENSIPUG00000018011	trmt12	92	58.780	ENSSLDG00000025007	trmt12	99	58.780	Seriola_lalandi_dorsalis
ENSIPUG00000018011	trmt12	90	48.148	ENSSPUG00000005321	TRMT12	95	48.148	Sphenodon_punctatus
ENSIPUG00000018011	trmt12	92	56.311	ENSSPAG00000009435	trmt12	97	56.311	Stegastes_partitus
ENSIPUG00000018011	trmt12	91	49.395	ENSTGUG00000002280	TRMT12	99	49.639	Taeniopygia_guttata
ENSIPUG00000018011	trmt12	92	55.961	ENSTRUG00000011548	trmt12	99	55.961	Takifugu_rubripes
ENSIPUG00000018011	trmt12	92	54.612	ENSTNIG00000016866	trmt12	99	54.612	Tetraodon_nigroviridis
ENSIPUG00000018011	trmt12	91	51.408	ENSUAMG00000002067	TRMT12	97	51.408	Ursus_americanus
ENSIPUG00000018011	trmt12	91	51.294	ENSVPAG00000006519	TRMT12	95	51.294	Vicugna_pacos
ENSIPUG00000018011	trmt12	91	51.294	ENSVVUG00000016790	TRMT12	95	51.294	Vulpes_vulpes
ENSIPUG00000018011	trmt12	91	47.561	ENSXETG00000009641	trmt12	95	47.561	Xenopus_tropicalis
ENSIPUG00000018011	trmt12	92	55.231	ENSXCOG00000016505	trmt12	99	55.231	Xiphophorus_couchianus
ENSIPUG00000018011	trmt12	92	55.122	ENSXMAG00000025318	trmt12	99	55.122	Xiphophorus_maculatus