EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000018055 (Gene tree)
Gene ID: 108281107
Gene Symbol: mrpl20
Alias: wu:fa27e09|zgc:153312
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 2248 bases
Position: chr21:583388-585635
Accession: 108281107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000026644	Ribosomal_L20	PF00453.18	5.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000027741	-	1129	XM_017496678	ENSIPUP00000026644	149 (aa)	XP_017352167	A0A2D0TBC0

Gene Model

Click here to download ENSIPUG00000018055's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018055	mrpl20	99	65.306	ENSG00000242485	MRPL20	99	65.306	Homo_sapiens
ENSIPUG00000018055	mrpl20	100	81.208	ENSAPOG00000011835	mrpl20	100	81.208	Acanthochromis_polyacanthus
ENSIPUG00000018055	mrpl20	89	67.424	ENSAMEG00000013932	MRPL20	89	67.424	Ailuropoda_melanoleuca
ENSIPUG00000018055	mrpl20	100	80.537	ENSACIG00000019179	mrpl20	100	80.537	Amphilophus_citrinellus
ENSIPUG00000018055	mrpl20	100	82.550	ENSAOCG00000007734	mrpl20	100	82.550	Amphiprion_ocellaris
ENSIPUG00000018055	mrpl20	100	81.879	ENSAPEG00000014049	mrpl20	100	81.879	Amphiprion_percula
ENSIPUG00000018055	mrpl20	100	79.195	ENSATEG00000007369	mrpl20	100	79.195	Anabas_testudineus
ENSIPUG00000018055	mrpl20	99	61.486	ENSACAG00000009143	MRPL20	99	61.486	Anolis_carolinensis
ENSIPUG00000018055	mrpl20	87	64.341	ENSANAG00000021078	-	85	64.341	Aotus_nancymaae
ENSIPUG00000018055	mrpl20	93	80.435	ENSACLG00000021726	mrpl20	88	80.435	Astatotilapia_calliptera
ENSIPUG00000018055	mrpl20	99	72.297	ENSAMXG00000035403	mrpl20	99	72.297	Astyanax_mexicanus
ENSIPUG00000018055	mrpl20	99	63.946	ENSBTAG00000004872	MRPL20	74	63.946	Bos_taurus
ENSIPUG00000018055	mrpl20	64	32.292	WBGene00012992	mrpl-20	50	32.292	Caenorhabditis_elegans
ENSIPUG00000018055	mrpl20	99	65.306	ENSCJAG00000039231	-	99	65.306	Callithrix_jacchus
ENSIPUG00000018055	mrpl20	99	64.626	ENSCAFG00000019259	MRPL20	99	64.626	Canis_familiaris
ENSIPUG00000018055	mrpl20	97	51.389	ENSCAFG00020025880	-	77	51.389	Canis_lupus_dingo
ENSIPUG00000018055	mrpl20	99	63.265	ENSCHIG00000010545	MRPL20	99	63.265	Capra_hircus
ENSIPUG00000018055	mrpl20	99	67.347	ENSTSYG00000033620	MRPL20	99	67.347	Carlito_syrichta
ENSIPUG00000018055	mrpl20	99	65.306	ENSCPOG00000023001	MRPL20	99	65.306	Cavia_porcellus
ENSIPUG00000018055	mrpl20	99	65.986	ENSCCAG00000032768	-	99	65.986	Cebus_capucinus
ENSIPUG00000018055	mrpl20	84	55.200	ENSCATG00000040437	-	65	55.200	Cercocebus_atys
ENSIPUG00000018055	mrpl20	99	65.986	ENSCATG00000033927	MRPL20	99	65.986	Cercocebus_atys
ENSIPUG00000018055	mrpl20	99	65.306	ENSCLAG00000009757	-	99	65.306	Chinchilla_lanigera
ENSIPUG00000018055	mrpl20	100	44.295	ENSCLAG00000011866	-	100	44.295	Chinchilla_lanigera
ENSIPUG00000018055	mrpl20	99	65.986	ENSCSAG00000000688	-	99	65.986	Chlorocebus_sabaeus
ENSIPUG00000018055	mrpl20	99	64.626	ENSCSAG00000019479	-	99	64.626	Chlorocebus_sabaeus
ENSIPUG00000018055	mrpl20	99	62.585	ENSCPBG00000022905	MRPL20	99	62.585	Chrysemys_picta_bellii
ENSIPUG00000018055	mrpl20	99	52.381	ENSCANG00000039625	MRPL20	98	52.381	Colobus_angolensis_palliatus
ENSIPUG00000018055	mrpl20	99	64.626	ENSCGRG00001024028	Mrpl20	99	64.626	Cricetulus_griseus_chok1gshd
ENSIPUG00000018055	mrpl20	99	64.626	ENSCGRG00000007447	Mrpl20	99	64.626	Cricetulus_griseus_crigri
ENSIPUG00000018055	mrpl20	97	79.310	ENSCSEG00000002016	mrpl20	85	79.310	Cynoglossus_semilaevis
ENSIPUG00000018055	mrpl20	97	79.310	ENSCVAG00000022768	mrpl20	98	79.310	Cyprinodon_variegatus
ENSIPUG00000018055	mrpl20	100	82.550	ENSDARG00000090462	mrpl20	100	82.550	Danio_rerio
ENSIPUG00000018055	mrpl20	99	68.027	ENSDNOG00000044958	MRPL20	99	68.027	Dasypus_novemcinctus
ENSIPUG00000018055	mrpl20	54	61.728	ENSDORG00000028591	Mrpl20	98	61.728	Dipodomys_ordii
ENSIPUG00000018055	mrpl20	86	44.186	FBgn0036335	mRpL20	86	44.186	Drosophila_melanogaster
ENSIPUG00000018055	mrpl20	99	56.463	ENSETEG00000012315	MRPL20	99	56.463	Echinops_telfairi
ENSIPUG00000018055	mrpl20	99	62.585	ENSEBUG00000002214	mrpl20	99	62.585	Eptatretus_burgeri
ENSIPUG00000018055	mrpl20	99	67.347	ENSEASG00005014515	MRPL20	99	67.347	Equus_asinus_asinus
ENSIPUG00000018055	mrpl20	99	67.347	ENSECAG00000018364	MRPL20	99	67.347	Equus_caballus
ENSIPUG00000018055	mrpl20	79	52.542	ENSEEUG00000004596	-	98	52.542	Erinaceus_europaeus
ENSIPUG00000018055	mrpl20	100	80.537	ENSELUG00000013398	mrpl20	100	80.537	Esox_lucius
ENSIPUG00000018055	mrpl20	99	65.986	ENSFCAG00000033203	MRPL20	99	65.986	Felis_catus
ENSIPUG00000018055	mrpl20	99	59.184	ENSFALG00000009334	MRPL20	99	59.184	Ficedula_albicollis
ENSIPUG00000018055	mrpl20	99	65.306	ENSFDAG00000013320	MRPL20	99	65.306	Fukomys_damarensis
ENSIPUG00000018055	mrpl20	97	80.690	ENSFHEG00000004769	mrpl20	98	80.690	Fundulus_heteroclitus
ENSIPUG00000018055	mrpl20	97	77.083	ENSGMOG00000008125	mrpl20	100	77.083	Gadus_morhua
ENSIPUG00000018055	mrpl20	99	59.184	ENSGALG00000001542	MRPL20	99	59.184	Gallus_gallus
ENSIPUG00000018055	mrpl20	97	81.379	ENSGAFG00000021580	mrpl20	98	81.379	Gambusia_affinis
ENSIPUG00000018055	mrpl20	100	79.195	ENSGACG00000001134	mrpl20	100	79.195	Gasterosteus_aculeatus
ENSIPUG00000018055	mrpl20	99	61.905	ENSGAGG00000001945	MRPL20	99	61.905	Gopherus_agassizii
ENSIPUG00000018055	mrpl20	99	65.306	ENSGGOG00000027251	-	99	65.306	Gorilla_gorilla
ENSIPUG00000018055	mrpl20	100	81.879	ENSHBUG00000023626	mrpl20	100	81.879	Haplochromis_burtoni
ENSIPUG00000018055	mrpl20	99	62.585	ENSHGLG00000017538	MRPL20	99	62.585	Heterocephalus_glaber_female
ENSIPUG00000018055	mrpl20	99	63.265	ENSHGLG00100012816	MRPL20	99	63.265	Heterocephalus_glaber_male
ENSIPUG00000018055	mrpl20	100	73.154	ENSHCOG00000005830	mrpl20	100	73.154	Hippocampus_comes
ENSIPUG00000018055	mrpl20	99	65.986	ENSJJAG00000020728	Mrpl20	99	65.986	Jaculus_jaculus
ENSIPUG00000018055	mrpl20	100	76.510	ENSKMAG00000021650	mrpl20	100	76.510	Kryptolebias_marmoratus
ENSIPUG00000018055	mrpl20	100	79.195	ENSLBEG00000021562	mrpl20	100	79.195	Labrus_bergylta
ENSIPUG00000018055	mrpl20	99	73.469	ENSLACG00000019149	MRPL20	99	73.469	Latimeria_chalumnae
ENSIPUG00000018055	mrpl20	99	65.306	ENSLAFG00000010706	MRPL20	99	65.306	Loxodonta_africana
ENSIPUG00000018055	mrpl20	93	52.899	ENSMFAG00000046195	-	82	52.899	Macaca_fascicularis
ENSIPUG00000018055	mrpl20	99	65.986	ENSMFAG00000043214	MRPL20	99	65.986	Macaca_fascicularis
ENSIPUG00000018055	mrpl20	65	64.948	ENSMMUG00000038877	MRPL20	74	64.948	Macaca_mulatta
ENSIPUG00000018055	mrpl20	99	65.986	ENSMNEG00000041891	MRPL20	99	65.986	Macaca_nemestrina
ENSIPUG00000018055	mrpl20	89	54.135	ENSMNEG00000000027	-	68	54.135	Macaca_nemestrina
ENSIPUG00000018055	mrpl20	81	65.000	ENSMLEG00000037086	MRPL20	100	65.000	Mandrillus_leucophaeus
ENSIPUG00000018055	mrpl20	87	54.615	ENSMLEG00000037605	-	80	54.615	Mandrillus_leucophaeus
ENSIPUG00000018055	mrpl20	100	80.537	ENSMAMG00000023884	mrpl20	100	80.537	Mastacembelus_armatus
ENSIPUG00000018055	mrpl20	100	81.879	ENSMZEG00005011376	mrpl20	100	81.879	Maylandia_zebra
ENSIPUG00000018055	mrpl20	80	60.504	ENSMGAG00000002774	MRPL20	80	60.504	Meleagris_gallopavo
ENSIPUG00000018055	mrpl20	99	63.946	ENSMAUG00000013299	Mrpl20	99	63.946	Mesocricetus_auratus
ENSIPUG00000018055	mrpl20	99	66.667	ENSMICG00000041892	MRPL20	99	66.667	Microcebus_murinus
ENSIPUG00000018055	mrpl20	99	61.905	ENSMOCG00000009545	-	99	61.905	Microtus_ochrogaster
ENSIPUG00000018055	mrpl20	99	65.986	ENSMOCG00000000404	-	99	65.986	Microtus_ochrogaster
ENSIPUG00000018055	mrpl20	100	57.047	ENSMMOG00000021753	mrpl20	100	57.047	Mola_mola
ENSIPUG00000018055	mrpl20	100	58.389	ENSMODG00000006562	MRPL20	100	58.389	Monodelphis_domestica
ENSIPUG00000018055	mrpl20	100	78.523	ENSMALG00000018593	mrpl20	100	78.523	Monopterus_albus
ENSIPUG00000018055	mrpl20	99	65.986	MGP_CAROLIEiJ_G0026904	Mrpl20	99	65.986	Mus_caroli
ENSIPUG00000018055	mrpl20	99	66.667	ENSMUSG00000029066	Mrpl20	99	66.667	Mus_musculus
ENSIPUG00000018055	mrpl20	99	63.265	MGP_PahariEiJ_G0029252	Mrpl20	99	63.265	Mus_pahari
ENSIPUG00000018055	mrpl20	99	66.667	MGP_SPRETEiJ_G0027898	Mrpl20	99	66.667	Mus_spretus
ENSIPUG00000018055	mrpl20	99	65.306	ENSMLUG00000011857	MRPL20	99	65.306	Myotis_lucifugus
ENSIPUG00000018055	mrpl20	99	64.626	ENSNGAG00000021688	Mrpl20	99	64.626	Nannospalax_galili
ENSIPUG00000018055	mrpl20	100	81.879	ENSNBRG00000006018	mrpl20	100	81.879	Neolamprologus_brichardi
ENSIPUG00000018055	mrpl20	54	62.963	ENSNLEG00000013868	-	79	62.963	Nomascus_leucogenys
ENSIPUG00000018055	mrpl20	99	64.626	ENSODEG00000010734	MRPL20	99	64.626	Octodon_degus
ENSIPUG00000018055	mrpl20	100	81.208	ENSONIG00000018914	mrpl20	100	81.208	Oreochromis_niloticus
ENSIPUG00000018055	mrpl20	100	79.195	ENSORLG00000018304	mrpl20	100	79.195	Oryzias_latipes
ENSIPUG00000018055	mrpl20	100	79.195	ENSORLG00020009128	mrpl20	100	79.195	Oryzias_latipes_hni
ENSIPUG00000018055	mrpl20	100	79.195	ENSORLG00015005156	mrpl20	100	79.195	Oryzias_latipes_hsok
ENSIPUG00000018055	mrpl20	100	80.537	ENSOMEG00000015654	mrpl20	100	80.537	Oryzias_melastigma
ENSIPUG00000018055	mrpl20	99	65.306	ENSOGAG00000005968	MRPL20	99	65.306	Otolemur_garnettii
ENSIPUG00000018055	mrpl20	99	63.265	ENSOARG00000003529	MRPL20	99	63.265	Ovis_aries
ENSIPUG00000018055	mrpl20	99	65.306	ENSPPAG00000042350	-	99	65.306	Pan_paniscus
ENSIPUG00000018055	mrpl20	99	65.306	ENSPPRG00000009188	MRPL20	99	65.306	Panthera_pardus
ENSIPUG00000018055	mrpl20	55	62.195	ENSPTIG00000020769	MRPL20	90	62.195	Panthera_tigris_altaica
ENSIPUG00000018055	mrpl20	99	65.306	ENSPTRG00000000029	MRPL20	99	65.306	Pan_troglodytes
ENSIPUG00000018055	mrpl20	99	65.986	ENSPANG00000015802	MRPL20	99	65.986	Papio_anubis
ENSIPUG00000018055	mrpl20	91	52.206	ENSPANG00000036197	-	97	52.206	Papio_anubis
ENSIPUG00000018055	mrpl20	99	77.551	ENSPKIG00000002248	mrpl20	99	77.551	Paramormyrops_kingsleyae
ENSIPUG00000018055	mrpl20	93	53.957	ENSPSIG00000003939	MRPL20	98	53.957	Pelodiscus_sinensis
ENSIPUG00000018055	mrpl20	100	81.208	ENSPMGG00000003966	mrpl20	100	81.208	Periophthalmus_magnuspinnatus
ENSIPUG00000018055	mrpl20	99	51.020	ENSPEMG00000009458	-	84	51.020	Peromyscus_maniculatus_bairdii
ENSIPUG00000018055	mrpl20	64	43.158	ENSPMAG00000009990	-	75	43.158	Petromyzon_marinus
ENSIPUG00000018055	mrpl20	100	59.732	ENSPCIG00000007747	MRPL20	100	59.732	Phascolarctos_cinereus
ENSIPUG00000018055	mrpl20	97	80.690	ENSPFOG00000018163	mrpl20	98	80.690	Poecilia_formosa
ENSIPUG00000018055	mrpl20	97	80.690	ENSPLAG00000016451	mrpl20	98	80.690	Poecilia_latipinna
ENSIPUG00000018055	mrpl20	97	81.379	ENSPMEG00000002561	mrpl20	98	81.379	Poecilia_mexicana
ENSIPUG00000018055	mrpl20	97	71.918	ENSPREG00000004925	mrpl20	98	72.603	Poecilia_reticulata
ENSIPUG00000018055	mrpl20	99	66.667	ENSPCAG00000001425	MRPL20	99	66.667	Procavia_capensis
ENSIPUG00000018055	mrpl20	99	67.347	ENSPCOG00000025653	-	99	67.347	Propithecus_coquereli
ENSIPUG00000018055	mrpl20	99	61.224	ENSPCOG00000004450	-	99	61.224	Propithecus_coquereli
ENSIPUG00000018055	mrpl20	100	81.879	ENSPNYG00000008626	mrpl20	100	81.879	Pundamilia_nyererei
ENSIPUG00000018055	mrpl20	100	89.933	ENSPNAG00000016694	mrpl20	100	89.933	Pygocentrus_nattereri
ENSIPUG00000018055	mrpl20	99	65.306	ENSRNOG00000018647	Mrpl20	99	65.306	Rattus_norvegicus
ENSIPUG00000018055	mrpl20	99	65.306	ENSRBIG00000042278	MRPL20	99	65.306	Rhinopithecus_bieti
ENSIPUG00000018055	mrpl20	99	65.306	ENSRROG00000003574	MRPL20	99	65.306	Rhinopithecus_roxellana
ENSIPUG00000018055	mrpl20	54	59.259	ENSSBOG00000035454	-	98	59.259	Saimiri_boliviensis_boliviensis
ENSIPUG00000018055	mrpl20	100	54.194	ENSSHAG00000008197	MRPL20	100	54.194	Sarcophilus_harrisii
ENSIPUG00000018055	mrpl20	99	78.231	ENSSFOG00015016009	mrpl20	99	78.231	Scleropages_formosus
ENSIPUG00000018055	mrpl20	100	79.866	ENSSMAG00000000214	mrpl20	100	79.866	Scophthalmus_maximus
ENSIPUG00000018055	mrpl20	100	79.195	ENSSDUG00000008646	mrpl20	100	79.195	Seriola_dumerili
ENSIPUG00000018055	mrpl20	100	79.195	ENSSLDG00000023171	mrpl20	100	79.195	Seriola_lalandi_dorsalis
ENSIPUG00000018055	mrpl20	99	64.626	ENSSPUG00000016911	MRPL20	99	64.626	Sphenodon_punctatus
ENSIPUG00000018055	mrpl20	100	81.879	ENSSPAG00000012887	mrpl20	100	81.879	Stegastes_partitus
ENSIPUG00000018055	mrpl20	99	65.306	ENSSSCG00000033374	MRPL20	99	65.306	Sus_scrofa
ENSIPUG00000018055	mrpl20	79	59.322	ENSTGUG00000003113	MRPL20	96	59.322	Taeniopygia_guttata
ENSIPUG00000018055	mrpl20	97	79.310	ENSTRUG00000021410	mrpl20	97	79.310	Takifugu_rubripes
ENSIPUG00000018055	mrpl20	97	80.000	ENSTNIG00000014657	mrpl20	97	80.000	Tetraodon_nigroviridis
ENSIPUG00000018055	mrpl20	99	67.347	ENSTBEG00000008735	MRPL20	99	67.347	Tupaia_belangeri
ENSIPUG00000018055	mrpl20	79	65.254	ENSTTRG00000017046	MRPL20	98	65.254	Tursiops_truncatus
ENSIPUG00000018055	mrpl20	79	48.718	ENSUAMG00000028406	-	75	48.718	Ursus_americanus
ENSIPUG00000018055	mrpl20	99	66.667	ENSUAMG00000012829	-	99	66.667	Ursus_americanus
ENSIPUG00000018055	mrpl20	54	62.963	ENSUMAG00000001917	-	71	62.963	Ursus_maritimus
ENSIPUG00000018055	mrpl20	79	47.863	ENSUMAG00000003240	-	75	47.863	Ursus_maritimus
ENSIPUG00000018055	mrpl20	54	59.259	ENSVPAG00000001846	-	98	59.259	Vicugna_pacos
ENSIPUG00000018055	mrpl20	99	65.306	ENSVVUG00000004455	MRPL20	99	65.306	Vulpes_vulpes
ENSIPUG00000018055	mrpl20	100	70.470	ENSXETG00000011118	mrpl20	100	70.470	Xenopus_tropicalis
ENSIPUG00000018055	mrpl20	97	79.310	ENSXCOG00000004220	mrpl20	98	79.310	Xiphophorus_couchianus
ENSIPUG00000018055	mrpl20	97	79.310	ENSXMAG00000016652	mrpl20	98	79.310	Xiphophorus_maculatus