EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000018136 (Gene tree)
Gene ID: 108260248
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 18393 bases
Position: chr28:14747597-14765989
Accession: 108260248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000026785	YTH	PF04146.15	1.4e-39	1	1
ENSIPUP00000026768	YTH	PF04146.15	1.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000027886	-	4145	XM_017460355	ENSIPUP00000026785	676 (aa)	XP_017315844	A0A2D0QC33
ENSIPUT00000027868	-	4235	XM_017460354	ENSIPUP00000026768	706 (aa)	XP_017315843	A0A2D0QAY0

Gene Model

Click here to download ENSIPUG00000018136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018136's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018136	ythdc1	61	83.759	ENSG00000083896	YTHDC1	85	82.500	Homo_sapiens
ENSIPUG00000018136	ythdc1	66	61.947	ENSAPOG00000013997	ythdc1	93	59.242	Acanthochromis_polyacanthus
ENSIPUG00000018136	ythdc1	61	84.223	ENSAMEG00000005688	YTHDC1	93	67.391	Ailuropoda_melanoleuca
ENSIPUG00000018136	ythdc1	76	60.465	ENSACIG00000019728	ythdc1	93	55.975	Amphilophus_citrinellus
ENSIPUG00000018136	ythdc1	92	59.598	ENSAOCG00000000239	ythdc1	94	62.866	Amphiprion_ocellaris
ENSIPUG00000018136	ythdc1	83	61.780	ENSAPEG00000000618	ythdc1	88	64.161	Amphiprion_percula
ENSIPUG00000018136	ythdc1	50	68.421	ENSATEG00000023007	ythdc1	91	63.923	Anabas_testudineus
ENSIPUG00000018136	ythdc1	91	68.072	ENSAPLG00000009921	YTHDC1	92	68.230	Anas_platyrhynchos
ENSIPUG00000018136	ythdc1	92	66.766	ENSACAG00000009697	YTHDC1	93	66.766	Anolis_carolinensis
ENSIPUG00000018136	ythdc1	61	83.759	ENSANAG00000001522	YTHDC1	93	67.442	Aotus_nancymaae
ENSIPUG00000018136	ythdc1	92	60.308	ENSACLG00000019371	ythdc1	94	63.385	Astatotilapia_calliptera
ENSIPUG00000018136	ythdc1	92	87.087	ENSAMXG00000006978	ythdc1	92	86.457	Astyanax_mexicanus
ENSIPUG00000018136	ythdc1	61	83.063	ENSBTAG00000015572	YTHDC1	93	66.958	Bos_taurus
ENSIPUG00000018136	ythdc1	61	83.759	ENSCJAG00000009934	YTHDC1	93	67.442	Callithrix_jacchus
ENSIPUG00000018136	ythdc1	61	84.223	ENSCAFG00000002821	YTHDC1	93	67.536	Canis_familiaris
ENSIPUG00000018136	ythdc1	61	84.223	ENSCAFG00020027112	YTHDC1	93	67.536	Canis_lupus_dingo
ENSIPUG00000018136	ythdc1	61	71.298	ENSCHIG00000004810	YTHDC1	95	63.724	Capra_hircus
ENSIPUG00000018136	ythdc1	61	83.759	ENSTSYG00000011668	YTHDC1	93	67.394	Carlito_syrichta
ENSIPUG00000018136	ythdc1	59	52.217	ENSCAPG00000008722	YTHDC1	89	47.368	Cavia_aperea
ENSIPUG00000018136	ythdc1	61	74.246	ENSCPOG00000010929	YTHDC1	92	59.565	Cavia_porcellus
ENSIPUG00000018136	ythdc1	61	83.759	ENSCCAG00000035754	YTHDC1	93	67.784	Cebus_capucinus
ENSIPUG00000018136	ythdc1	61	82.232	ENSCATG00000036320	YTHDC1	97	64.190	Cercocebus_atys
ENSIPUG00000018136	ythdc1	91	66.812	ENSCLAG00000005482	YTHDC1	92	67.153	Chinchilla_lanigera
ENSIPUG00000018136	ythdc1	61	83.759	ENSCSAG00000005252	YTHDC1	93	67.442	Chlorocebus_sabaeus
ENSIPUG00000018136	ythdc1	93	67.356	ENSCPBG00000021965	YTHDC1	98	68.155	Chrysemys_picta_bellii
ENSIPUG00000018136	ythdc1	61	83.759	ENSCANG00000004769	YTHDC1	93	67.442	Colobus_angolensis_palliatus
ENSIPUG00000018136	ythdc1	61	82.005	ENSCGRG00001000816	Ythdc1	93	66.475	Cricetulus_griseus_chok1gshd
ENSIPUG00000018136	ythdc1	91	64.853	ENSCGRG00000009807	Ythdc1	92	67.404	Cricetulus_griseus_crigri
ENSIPUG00000018136	ythdc1	58	66.588	ENSCSEG00000020404	ythdc1	94	61.409	Cynoglossus_semilaevis
ENSIPUG00000018136	ythdc1	58	66.509	ENSCVAG00000022349	ythdc1	94	60.648	Cyprinodon_variegatus
ENSIPUG00000018136	ythdc1	92	81.746	ENSDARG00000051953	ythdc1	92	81.111	Danio_rerio
ENSIPUG00000018136	ythdc1	92	67.057	ENSDNOG00000004949	YTHDC1	93	67.595	Dasypus_novemcinctus
ENSIPUG00000018136	ythdc1	61	83.759	ENSDORG00000013045	Ythdc1	92	67.109	Dipodomys_ordii
ENSIPUG00000018136	ythdc1	71	92.958	ENSETEG00000001878	YTHDC1	64	93.617	Echinops_telfairi
ENSIPUG00000018136	ythdc1	61	84.223	ENSEASG00005018383	YTHDC1	93	67.391	Equus_asinus_asinus
ENSIPUG00000018136	ythdc1	79	84.987	ENSECAG00000018303	YTHDC1	80	86.517	Equus_caballus
ENSIPUG00000018136	ythdc1	61	83.295	ENSEEUG00000015466	YTHDC1	93	67.006	Erinaceus_europaeus
ENSIPUG00000018136	ythdc1	92	76.480	ENSELUG00000014029	ythdc1	96	75.587	Esox_lucius
ENSIPUG00000018136	ythdc1	61	84.223	ENSFCAG00000026791	YTHDC1	93	67.489	Felis_catus
ENSIPUG00000018136	ythdc1	71	78.202	ENSFALG00000006581	YTHDC1	87	81.280	Ficedula_albicollis
ENSIPUG00000018136	ythdc1	91	68.095	ENSFDAG00000018560	YTHDC1	92	68.148	Fukomys_damarensis
ENSIPUG00000018136	ythdc1	62	74.439	ENSGMOG00000018815	ythdc1	79	77.612	Gadus_morhua
ENSIPUG00000018136	ythdc1	91	68.223	ENSGALG00000035906	YTHDC1	88	65.497	Gallus_gallus
ENSIPUG00000018136	ythdc1	100	54.843	ENSGACG00000015486	ythdc1	100	53.662	Gasterosteus_aculeatus
ENSIPUG00000018136	ythdc1	92	67.601	ENSGAGG00000007108	YTHDC1	92	67.762	Gopherus_agassizii
ENSIPUG00000018136	ythdc1	61	82.232	ENSGGOG00000021958	YTHDC1	97	64.068	Gorilla_gorilla
ENSIPUG00000018136	ythdc1	92	60.462	ENSHBUG00000019288	ythdc1	93	63.538	Haplochromis_burtoni
ENSIPUG00000018136	ythdc1	94	56.090	ENSHGLG00000003239	-	86	56.135	Heterocephalus_glaber_female
ENSIPUG00000018136	ythdc1	92	67.677	ENSHGLG00000006319	-	93	67.583	Heterocephalus_glaber_female
ENSIPUG00000018136	ythdc1	92	67.489	ENSHGLG00100001556	-	93	67.540	Heterocephalus_glaber_male
ENSIPUG00000018136	ythdc1	94	54.641	ENSHGLG00100008060	-	86	54.656	Heterocephalus_glaber_male
ENSIPUG00000018136	ythdc1	67	74.468	ENSHCOG00000001520	ythdc1	80	74.468	Hippocampus_comes
ENSIPUG00000018136	ythdc1	61	82.232	ENSSTOG00000013652	YTHDC1	93	66.667	Ictidomys_tridecemlineatus
ENSIPUG00000018136	ythdc1	61	81.549	ENSJJAG00000010268	Ythdc1	93	66.569	Jaculus_jaculus
ENSIPUG00000018136	ythdc1	58	67.797	ENSKMAG00000006483	ythdc1	85	71.671	Kryptolebias_marmoratus
ENSIPUG00000018136	ythdc1	66	77.273	ENSLBEG00000020831	ythdc1	72	77.273	Labrus_bergylta
ENSIPUG00000018136	ythdc1	86	64.798	ENSLACG00000004893	YTHDC1	92	66.823	Latimeria_chalumnae
ENSIPUG00000018136	ythdc1	92	73.529	ENSLOCG00000003045	ythdc1	92	73.551	Lepisosteus_oculatus
ENSIPUG00000018136	ythdc1	92	67.677	ENSLAFG00000021592	YTHDC1	100	64.167	Loxodonta_africana
ENSIPUG00000018136	ythdc1	61	82.232	ENSMFAG00000031927	YTHDC1	96	64.000	Macaca_fascicularis
ENSIPUG00000018136	ythdc1	61	83.759	ENSMMUG00000002265	YTHDC1	93	67.442	Macaca_mulatta
ENSIPUG00000018136	ythdc1	61	83.759	ENSMNEG00000033751	YTHDC1	93	67.442	Macaca_nemestrina
ENSIPUG00000018136	ythdc1	61	83.759	ENSMLEG00000042147	YTHDC1	93	67.442	Mandrillus_leucophaeus
ENSIPUG00000018136	ythdc1	58	69.118	ENSMAMG00000013122	ythdc1	92	61.527	Mastacembelus_armatus
ENSIPUG00000018136	ythdc1	92	60.308	ENSMZEG00005023173	ythdc1	93	63.385	Maylandia_zebra
ENSIPUG00000018136	ythdc1	92	67.953	ENSMGAG00000010391	YTHDC1	92	67.958	Meleagris_gallopavo
ENSIPUG00000018136	ythdc1	61	82.005	ENSMAUG00000001286	Ythdc1	93	66.619	Mesocricetus_auratus
ENSIPUG00000018136	ythdc1	92	67.050	ENSMICG00000034640	YTHDC1	93	66.955	Microcebus_murinus
ENSIPUG00000018136	ythdc1	91	66.471	ENSMOCG00000020201	Ythdc1	93	66.570	Microtus_ochrogaster
ENSIPUG00000018136	ythdc1	51	55.587	ENSMODG00000004117	-	92	56.347	Monodelphis_domestica
ENSIPUG00000018136	ythdc1	96	43.118	ENSMODG00000010076	-	74	55.131	Monodelphis_domestica
ENSIPUG00000018136	ythdc1	92	68.610	ENSMODG00000020754	-	92	68.161	Monodelphis_domestica
ENSIPUG00000018136	ythdc1	96	53.391	ENSMODG00000014337	-	95	60.187	Monodelphis_domestica
ENSIPUG00000018136	ythdc1	68	52.401	ENSMODG00000009173	-	88	54.481	Monodelphis_domestica
ENSIPUG00000018136	ythdc1	83	61.207	ENSMALG00000013412	ythdc1	93	62.694	Monopterus_albus
ENSIPUG00000018136	ythdc1	61	83.295	MGP_CAROLIEiJ_G0027347	Ythdc1	93	66.812	Mus_caroli
ENSIPUG00000018136	ythdc1	92	66.860	ENSMUSG00000035851	Ythdc1	93	67.054	Mus_musculus
ENSIPUG00000018136	ythdc1	92	66.232	MGP_PahariEiJ_G0017126	Ythdc1	93	66.860	Mus_pahari
ENSIPUG00000018136	ythdc1	92	66.812	MGP_SPRETEiJ_G0028339	Ythdc1	93	67.006	Mus_spretus
ENSIPUG00000018136	ythdc1	68	85.496	ENSMPUG00000001743	YTHDC1	66	85.496	Mustela_putorius_furo
ENSIPUG00000018136	ythdc1	91	68.047	ENSMLUG00000016300	YTHDC1	92	67.953	Myotis_lucifugus
ENSIPUG00000018136	ythdc1	58	56.081	ENSNGAG00000024000	Ythdc1	93	55.982	Nannospalax_galili
ENSIPUG00000018136	ythdc1	58	66.420	ENSNBRG00000007663	ythdc1	91	58.462	Neolamprologus_brichardi
ENSIPUG00000018136	ythdc1	61	81.549	ENSNLEG00000009202	YTHDC1	96	64.695	Nomascus_leucogenys
ENSIPUG00000018136	ythdc1	70	84.615	ENSOPRG00000008986	YTHDC1	66	84.466	Ochotona_princeps
ENSIPUG00000018136	ythdc1	92	67.784	ENSODEG00000001715	YTHDC1	93	67.836	Octodon_degus
ENSIPUG00000018136	ythdc1	92	77.273	ENSONIG00000012651	ythdc1	95	75.556	Oreochromis_niloticus
ENSIPUG00000018136	ythdc1	88	60.329	ENSOANG00000014398	YTHDC1	55	82.963	Ornithorhynchus_anatinus
ENSIPUG00000018136	ythdc1	93	63.081	ENSOCUG00000015886	YTHDC1	58	81.687	Oryctolagus_cuniculus
ENSIPUG00000018136	ythdc1	97	59.792	ENSORLG00000030544	ythdc1	94	63.027	Oryzias_latipes
ENSIPUG00000018136	ythdc1	97	59.792	ENSORLG00020019316	ythdc1	94	62.559	Oryzias_latipes_hni
ENSIPUG00000018136	ythdc1	92	59.688	ENSOMEG00000000551	ythdc1	94	62.187	Oryzias_melastigma
ENSIPUG00000018136	ythdc1	61	84.223	ENSOGAG00000003362	YTHDC1	93	68.076	Otolemur_garnettii
ENSIPUG00000018136	ythdc1	61	83.063	ENSOARG00000008633	YTHDC1	93	66.958	Ovis_aries
ENSIPUG00000018136	ythdc1	61	82.232	ENSPPAG00000041315	YTHDC1	97	65.524	Pan_paniscus
ENSIPUG00000018136	ythdc1	61	82.688	ENSPPRG00000011979	YTHDC1	93	66.714	Panthera_pardus
ENSIPUG00000018136	ythdc1	61	82.232	ENSPTIG00000015527	YTHDC1	93	66.521	Panthera_tigris_altaica
ENSIPUG00000018136	ythdc1	61	82.232	ENSPTRG00000016105	YTHDC1	97	65.524	Pan_troglodytes
ENSIPUG00000018136	ythdc1	61	82.232	ENSPANG00000021590	YTHDC1	96	64.015	Papio_anubis
ENSIPUG00000018136	ythdc1	92	77.096	ENSPKIG00000018497	ythdc1	93	77.096	Paramormyrops_kingsleyae
ENSIPUG00000018136	ythdc1	91	68.271	ENSPSIG00000002782	YTHDC1	92	67.970	Pelodiscus_sinensis
ENSIPUG00000018136	ythdc1	56	62.813	ENSPMGG00000000970	-	76	64.375	Periophthalmus_magnuspinnatus
ENSIPUG00000018136	ythdc1	61	83.527	ENSPEMG00000013850	Ythdc1	92	67.208	Peromyscus_maniculatus_bairdii
ENSIPUG00000018136	ythdc1	92	68.976	ENSPCIG00000006870	YTHDC1	92	68.373	Phascolarctos_cinereus
ENSIPUG00000018136	ythdc1	58	66.508	ENSPFOG00000013404	ythdc1	94	60.125	Poecilia_formosa
ENSIPUG00000018136	ythdc1	58	66.508	ENSPLAG00000011079	ythdc1	85	71.358	Poecilia_latipinna
ENSIPUG00000018136	ythdc1	58	66.508	ENSPMEG00000009238	ythdc1	94	60.280	Poecilia_mexicana
ENSIPUG00000018136	ythdc1	58	66.835	ENSPREG00000016973	ythdc1	93	58.136	Poecilia_reticulata
ENSIPUG00000018136	ythdc1	61	83.759	ENSPPYG00000014726	YTHDC1	85	73.042	Pongo_abelii
ENSIPUG00000018136	ythdc1	77	72.174	ENSPCAG00000009607	YTHDC1	77	69.528	Procavia_capensis
ENSIPUG00000018136	ythdc1	92	62.878	ENSPCOG00000019105	YTHDC1	92	62.771	Propithecus_coquereli
ENSIPUG00000018136	ythdc1	61	81.206	ENSPVAG00000015551	YTHDC1	93	65.412	Pteropus_vampyrus
ENSIPUG00000018136	ythdc1	92	60.308	ENSPNYG00000011687	ythdc1	94	63.385	Pundamilia_nyererei
ENSIPUG00000018136	ythdc1	92	87.218	ENSPNAG00000028365	ythdc1	93	87.519	Pygocentrus_nattereri
ENSIPUG00000018136	ythdc1	61	81.777	ENSRNOG00000001996	Ythdc1	93	65.616	Rattus_norvegicus
ENSIPUG00000018136	ythdc1	61	82.232	ENSRBIG00000028279	YTHDC1	96	63.048	Rhinopithecus_bieti
ENSIPUG00000018136	ythdc1	61	83.759	ENSRROG00000035028	YTHDC1	93	67.442	Rhinopithecus_roxellana
ENSIPUG00000018136	ythdc1	61	82.232	ENSSBOG00000022353	YTHDC1	96	64.000	Saimiri_boliviensis_boliviensis
ENSIPUG00000018136	ythdc1	92	67.868	ENSSHAG00000002538	YTHDC1	91	69.140	Sarcophilus_harrisii
ENSIPUG00000018136	ythdc1	92	77.361	ENSSFOG00015003298	ythdc1	93	76.418	Scleropages_formosus
ENSIPUG00000018136	ythdc1	58	66.351	ENSSMAG00000009086	ythdc1	94	60.648	Scophthalmus_maximus
ENSIPUG00000018136	ythdc1	58	69.287	ENSSDUG00000022008	ythdc1	94	63.623	Seriola_dumerili
ENSIPUG00000018136	ythdc1	58	69.287	ENSSLDG00000007926	ythdc1	94	63.470	Seriola_lalandi_dorsalis
ENSIPUG00000018136	ythdc1	61	83.527	ENSSARG00000010960	YTHDC1	72	84.000	Sorex_araneus
ENSIPUG00000018136	ythdc1	92	67.411	ENSSPUG00000009357	YTHDC1	97	66.818	Sphenodon_punctatus
ENSIPUG00000018136	ythdc1	58	69.586	ENSSPAG00000011449	ythdc1	94	62.614	Stegastes_partitus
ENSIPUG00000018136	ythdc1	61	83.991	ENSSSCG00000035505	YTHDC1	93	66.286	Sus_scrofa
ENSIPUG00000018136	ythdc1	92	68.006	ENSTGUG00000004452	-	92	67.857	Taeniopygia_guttata
ENSIPUG00000018136	ythdc1	92	51.149	ENSTRUG00000010142	ythdc1	92	53.566	Takifugu_rubripes
ENSIPUG00000018136	ythdc1	92	58.095	ENSTNIG00000013243	ythdc1	91	58.926	Tetraodon_nigroviridis
ENSIPUG00000018136	ythdc1	92	65.774	ENSTBEG00000011546	YTHDC1	92	64.286	Tupaia_belangeri
ENSIPUG00000018136	ythdc1	61	83.063	ENSTTRG00000005083	YTHDC1	93	66.618	Tursiops_truncatus
ENSIPUG00000018136	ythdc1	61	84.223	ENSUAMG00000010388	YTHDC1	92	66.876	Ursus_americanus
ENSIPUG00000018136	ythdc1	91	62.597	ENSUMAG00000013668	YTHDC1	90	63.256	Ursus_maritimus
ENSIPUG00000018136	ythdc1	92	64.680	ENSVPAG00000009040	YTHDC1	92	64.964	Vicugna_pacos
ENSIPUG00000018136	ythdc1	61	84.223	ENSVVUG00000005387	YTHDC1	92	66.928	Vulpes_vulpes
ENSIPUG00000018136	ythdc1	91	65.649	ENSXETG00000017960	ythdc1	91	65.777	Xenopus_tropicalis
ENSIPUG00000018136	ythdc1	51	56.566	ENSXCOG00000000530	ythdc1	82	57.028	Xiphophorus_couchianus
ENSIPUG00000018136	ythdc1	92	58.308	ENSXMAG00000005196	ythdc1	94	60.681	Xiphophorus_maculatus