EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000018262 (Gene tree)
Gene ID: 108269107
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 11282 bases
Position: chr8:26489224-26500505
Accession: 108269107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000026969	zf-RNPHF	PF08080.12	6.8e-07	1	1
ENSIPUP00000026963	zf-RNPHF	PF08080.12	7.5e-07	1	1
ENSIPUP00000026969	RRM_1	PF00076.22	5.7e-34	1	3
ENSIPUP00000026969	RRM_1	PF00076.22	5.7e-34	2	3
ENSIPUP00000026969	RRM_1	PF00076.22	5.7e-34	3	3
ENSIPUP00000026963	RRM_1	PF00076.22	6.2e-34	1	3
ENSIPUP00000026963	RRM_1	PF00076.22	6.2e-34	2	3
ENSIPUP00000026963	RRM_1	PF00076.22	6.2e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000028070	-	1233	XM_017474677	ENSIPUP00000026963	410 (aa)	XP_017330166	-
ENSIPUT00000028078	-	1909	XM_017474676	ENSIPUP00000026969	401 (aa)	XP_017330165	A0A2D0RJ42

Gene Model

Click here to download ENSIPUG00000018262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000018262	hnrnph1	89	59.350	ENSIPUG00000016015	hnrnph3	96	57.180
ENSIPUG00000018262	hnrnph1	80	45.483	ENSIPUG00000010533	grsf1	75	44.237
ENSIPUG00000018262	hnrnph1	95	83.887	ENSIPUG00000024047	hnrnph1l	98	79.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018262	hnrnph1	100	84.951	ENSAPOG00000016614	hnrnph1	100	83.010	Acanthochromis_polyacanthus
ENSIPUG00000018262	hnrnph1	92	87.599	ENSACIG00000008964	hnrnph1	86	91.212	Amphilophus_citrinellus
ENSIPUG00000018262	hnrnph1	100	84.223	ENSAOCG00000008372	hnrnph1	100	83.252	Amphiprion_ocellaris
ENSIPUG00000018262	hnrnph1	100	83.981	ENSAPEG00000012980	hnrnph1	100	83.010	Amphiprion_percula
ENSIPUG00000018262	hnrnph1	100	83.981	ENSATEG00000002792	hnrnph1	100	83.010	Anabas_testudineus
ENSIPUG00000018262	hnrnph1	99	72.149	ENSACAG00000016323	-	76	81.481	Anolis_carolinensis
ENSIPUG00000018262	hnrnph1	82	87.679	ENSACLG00000003313	hnrnph1	92	87.427	Astatotilapia_calliptera
ENSIPUG00000018262	hnrnph1	100	95.599	ENSAMXG00000002483	hnrnph1	100	95.599	Astyanax_mexicanus
ENSIPUG00000018262	hnrnph1	99	83.010	ENSAMXG00000030703	hnrnph1l	86	79.904	Astyanax_mexicanus
ENSIPUG00000018262	hnrnph1	100	85.194	ENSCSEG00000015891	hnrnph1	100	84.466	Cynoglossus_semilaevis
ENSIPUG00000018262	hnrnph1	100	83.981	ENSCVAG00000014097	hnrnph1	100	81.553	Cyprinodon_variegatus
ENSIPUG00000018262	hnrnph1	100	89.976	ENSDARG00000040881	hnrnph1	100	87.835	Danio_rerio
ENSIPUG00000018262	hnrnph1	95	86.990	ENSDARG00000005551	hnrnph1l	100	83.738	Danio_rerio
ENSIPUG00000018262	hnrnph1	98	83.377	ENSELUG00000021437	-	99	85.752	Esox_lucius
ENSIPUG00000018262	hnrnph1	100	79.452	ENSELUG00000006715	hnrnph1	89	84.054	Esox_lucius
ENSIPUG00000018262	hnrnph1	100	83.981	ENSFHEG00000008474	hnrnph1	100	81.068	Fundulus_heteroclitus
ENSIPUG00000018262	hnrnph1	92	82.025	ENSGMOG00000006782	hnrnph1	92	80.376	Gadus_morhua
ENSIPUG00000018262	hnrnph1	100	84.223	ENSGAFG00000006280	hnrnph1	100	81.553	Gambusia_affinis
ENSIPUG00000018262	hnrnph1	100	82.555	ENSGACG00000018352	hnrnph1	100	80.000	Gasterosteus_aculeatus
ENSIPUG00000018262	hnrnph1	82	87.679	ENSHBUG00000010547	hnrnph1	94	86.494	Haplochromis_burtoni
ENSIPUG00000018262	hnrnph1	100	77.305	ENSHCOG00000004513	hnrnph1	100	78.960	Hippocampus_comes
ENSIPUG00000018262	hnrnph1	100	82.892	ENSKMAG00000018802	hnrnph1	100	81.446	Kryptolebias_marmoratus
ENSIPUG00000018262	hnrnph1	100	84.709	ENSLBEG00000027811	hnrnph1	100	82.524	Labrus_bergylta
ENSIPUG00000018262	hnrnph1	98	80.590	ENSLOCG00000012510	hnrnph1	100	74.786	Lepisosteus_oculatus
ENSIPUG00000018262	hnrnph1	99	53.037	ENSMMUG00000017392	-	76	55.556	Macaca_mulatta
ENSIPUG00000018262	hnrnph1	99	53.037	ENSMNEG00000030544	-	76	55.556	Macaca_nemestrina
ENSIPUG00000018262	hnrnph1	83	85.556	ENSMAMG00000011478	hnrnph1	94	85.227	Mastacembelus_armatus
ENSIPUG00000018262	hnrnph1	100	85.194	ENSMZEG00005009791	hnrnph1	100	83.010	Maylandia_zebra
ENSIPUG00000018262	hnrnph1	92	84.514	ENSMMOG00000009064	hnrnph1	86	88.323	Mola_mola
ENSIPUG00000018262	hnrnph1	73	51.952	ENSMODG00000002200	-	84	52.632	Monodelphis_domestica
ENSIPUG00000018262	hnrnph1	91	87.500	ENSMALG00000003999	hnrnph1	100	78.497	Monopterus_albus
ENSIPUG00000018262	hnrnph1	82	87.679	ENSNBRG00000015406	hnrnph1	94	86.494	Neolamprologus_brichardi
ENSIPUG00000018262	hnrnph1	100	84.951	ENSONIG00000017754	hnrnph1	100	82.767	Oreochromis_niloticus
ENSIPUG00000018262	hnrnph1	100	83.254	ENSORLG00000006932	hnrnph1	100	80.861	Oryzias_latipes
ENSIPUG00000018262	hnrnph1	100	83.254	ENSORLG00020007881	hnrnph1	100	80.622	Oryzias_latipes_hni
ENSIPUG00000018262	hnrnph1	100	83.254	ENSORLG00015005306	hnrnph1	100	80.861	Oryzias_latipes_hsok
ENSIPUG00000018262	hnrnph1	100	84.746	ENSOMEG00000009827	hnrnph1	100	82.809	Oryzias_melastigma
ENSIPUG00000018262	hnrnph1	92	81.141	ENSPKIG00000009532	-	100	78.341	Paramormyrops_kingsleyae
ENSIPUG00000018262	hnrnph1	100	87.136	ENSPKIG00000018203	hnrnph1l	100	84.672	Paramormyrops_kingsleyae
ENSIPUG00000018262	hnrnph1	100	82.767	ENSPMGG00000012151	hnrnph1	100	80.583	Periophthalmus_magnuspinnatus
ENSIPUG00000018262	hnrnph1	100	84.223	ENSPFOG00000004097	hnrnph1	100	81.311	Poecilia_formosa
ENSIPUG00000018262	hnrnph1	100	84.223	ENSPLAG00000011771	hnrnph1	100	81.311	Poecilia_latipinna
ENSIPUG00000018262	hnrnph1	100	84.466	ENSPMEG00000019446	hnrnph1	100	82.039	Poecilia_mexicana
ENSIPUG00000018262	hnrnph1	100	84.466	ENSPREG00000005780	hnrnph1	100	82.039	Poecilia_reticulata
ENSIPUG00000018262	hnrnph1	100	85.194	ENSPNYG00000000204	hnrnph1	100	83.010	Pundamilia_nyererei
ENSIPUG00000018262	hnrnph1	100	95.599	ENSPNAG00000000439	hnrnph1	100	95.599	Pygocentrus_nattereri
ENSIPUG00000018262	hnrnph1	100	85.472	ENSPNAG00000002784	hnrnph1l	100	81.687	Pygocentrus_nattereri
ENSIPUG00000018262	hnrnph1	97	86.035	ENSSFOG00015016055	-	94	87.139	Scleropages_formosus
ENSIPUG00000018262	hnrnph1	96	88.413	ENSSFOG00015022796	hnrnph1l	100	86.650	Scleropages_formosus
ENSIPUG00000018262	hnrnph1	95	81.407	ENSSMAG00000007820	hnrnph1	90	85.556	Scophthalmus_maximus
ENSIPUG00000018262	hnrnph1	100	84.223	ENSSDUG00000008785	hnrnph1	100	83.252	Seriola_dumerili
ENSIPUG00000018262	hnrnph1	100	84.223	ENSSLDG00000010685	hnrnph1	100	83.252	Seriola_lalandi_dorsalis
ENSIPUG00000018262	hnrnph1	100	84.541	ENSSPAG00000009921	hnrnph1	100	83.010	Stegastes_partitus
ENSIPUG00000018262	hnrnph1	100	85.575	ENSTRUG00000020069	hnrnph1	100	84.108	Takifugu_rubripes
ENSIPUG00000018262	hnrnph1	99	72.998	ENSXETG00000018321	hnrnph1	99	71.560	Xenopus_tropicalis
ENSIPUG00000018262	hnrnph1	92	84.010	ENSXCOG00000009133	hnrnph1	92	82.480	Xiphophorus_couchianus
ENSIPUG00000018262	hnrnph1	92	87.335	ENSXMAG00000021332	hnrnph1	93	87.079	Xiphophorus_maculatus