EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000018563 (Gene tree)
Gene ID
108275083
Gene Symbol
cnot2
Alias
zgc:162316
Full Name
CCR4-NOT transcription complex subunit 2
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
11877 bases
Position
chr14:10474902-10486778
Accession
108275083
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000027449NOT2_3_5PF04153.181.2e-3111
ENSIPUP00000027470NOT2_3_5PF04153.181.2e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000028567-4180XM_017485657ENSIPUP00000027449520 (aa)XP_017341146A0A2D0SF98
ENSIPUT00000028588-3659XM_017485656ENSIPUP00000027470545 (aa)XP_017341145A0A2D0SFW6
Gene Model
Click here to download ENSIPUG00000018563's gene model file
Pathways
Pathway IDPathway NameSource
ipu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018563's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000018563cnot210084.291ENSIPUG00000016424CNOT29585.441
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000018563cnot210088.123ENSG00000111596CNOT210096.335Homo_sapiens
ENSIPUG00000018563cnot28870.574ENSAPOG00000017950CNOT29770.574Acanthochromis_polyacanthus
ENSIPUG00000018563cnot210089.293ENSAPOG00000021013cnot210089.293Acanthochromis_polyacanthus
ENSIPUG00000018563cnot210088.123ENSAMEG00000011938CNOT29787.856Ailuropoda_melanoleuca
ENSIPUG00000018563cnot29091.258ENSACIG00000020740cnot210091.322Amphilophus_citrinellus
ENSIPUG00000018563cnot27789.053ENSACIG00000007480CNOT29689.053Amphilophus_citrinellus
ENSIPUG00000018563cnot210089.484ENSAOCG00000022167cnot210089.484Amphiprion_ocellaris
ENSIPUG00000018563cnot210089.484ENSAPEG00000011343cnot210089.484Amphiprion_percula
ENSIPUG00000018563cnot210078.285ENSAPEG00000024152CNOT210079.745Amphiprion_percula
ENSIPUG00000018563cnot210090.038ENSATEG00000018641cnot210090.038Anabas_testudineus
ENSIPUG00000018563cnot210079.852ENSATEG00000023619CNOT210080.110Anabas_testudineus
ENSIPUG00000018563cnot210087.931ENSAPLG00000012657CNOT29987.931Anas_platyrhynchos
ENSIPUG00000018563cnot210088.697ENSACAG00000004779CNOT28588.697Anolis_carolinensis
ENSIPUG00000018563cnot210087.931ENSANAG00000024330CNOT29987.833Aotus_nancymaae
ENSIPUG00000018563cnot210081.025ENSACLG00000008724CNOT210081.214Astatotilapia_calliptera
ENSIPUG00000018563cnot210088.697ENSACLG00000004020cnot210089.851Astatotilapia_calliptera
ENSIPUG00000018563cnot210098.081ENSAMXG00000000972cnot210098.081Astyanax_mexicanus
ENSIPUG00000018563cnot210088.123ENSBTAG00000003748CNOT29987.358Bos_taurus
ENSIPUG00000018563cnot26737.135WBGene00003825ntl-27543.866Caenorhabditis_elegans
ENSIPUG00000018563cnot210079.885ENSCJAG00000001567CNOT29779.735Callithrix_jacchus
ENSIPUG00000018563cnot210088.123ENSCAFG00000000441CNOT29787.856Canis_familiaris
ENSIPUG00000018563cnot210087.931ENSCAFG00020016849CNOT29787.666Canis_lupus_dingo
ENSIPUG00000018563cnot210087.931ENSCHIG00000021610CNOT29987.170Capra_hircus
ENSIPUG00000018563cnot210087.931ENSTSYG00000012927CNOT29987.833Carlito_syrichta
ENSIPUG00000018563cnot210067.625ENSCAPG00000012192CNOT29667.681Cavia_aperea
ENSIPUG00000018563cnot210084.411ENSCPOG00000004756CNOT29784.181Cavia_porcellus
ENSIPUG00000018563cnot210088.123ENSCCAG00000033920CNOT29988.837Cebus_capucinus
ENSIPUG00000018563cnot210088.123ENSCATG00000036994CNOT210096.335Cercocebus_atys
ENSIPUG00000018563cnot210088.123ENSCLAG00000014354CNOT210089.451Chinchilla_lanigera
ENSIPUG00000018563cnot210088.123ENSCSAG00000004177CNOT29787.856Chlorocebus_sabaeus
ENSIPUG00000018563cnot210076.054ENSCHOG00000001283CNOT29775.901Choloepus_hoffmanni
ENSIPUG00000018563cnot210088.314ENSCPBG00000013399CNOT210088.314Chrysemys_picta_bellii
ENSIPUG00000018563cnot210088.123ENSCANG00000037683CNOT29787.856Colobus_angolensis_palliatus
ENSIPUG00000018563cnot210088.123ENSCGRG00001016595Cnot29788.660Cricetulus_griseus_chok1gshd
ENSIPUG00000018563cnot27990.049ENSCGRG00000001043Cnot29990.049Cricetulus_griseus_crigri
ENSIPUG00000018563cnot29089.126ENSCSEG00000015529cnot210089.256Cynoglossus_semilaevis
ENSIPUG00000018563cnot210077.922ENSCSEG00000020129-10081.765Cynoglossus_semilaevis
ENSIPUG00000018563cnot210075.416ENSCVAG00000019882CNOT29488.462Cyprinodon_variegatus
ENSIPUG00000018563cnot26389.329ENSCVAG00000003227cnot29787.761Cyprinodon_variegatus
ENSIPUG00000018563cnot210095.402ENSDARG00000061802cnot210095.402Danio_rerio
ENSIPUG00000018563cnot210087.595ENSDNOG00000019444CNOT29986.271Dasypus_novemcinctus
ENSIPUG00000018563cnot210088.123ENSDORG00000011201Cnot210089.451Dipodomys_ordii
ENSIPUG00000018563cnot25354.545FBgn0017550Rga5554.808Drosophila_melanogaster
ENSIPUG00000018563cnot210087.931ENSETEG00000007655CNOT29787.666Echinops_telfairi
ENSIPUG00000018563cnot210063.168ENSEBUG00000004355cnot210063.359Eptatretus_burgeri
ENSIPUG00000018563cnot210087.548ENSEASG00005008113CNOT29986.792Equus_asinus_asinus
ENSIPUG00000018563cnot210087.739ENSECAG00000013864CNOT29987.218Equus_caballus
ENSIPUG00000018563cnot26795.918ENSEEUG00000003003CNOT26695.918Erinaceus_europaeus
ENSIPUG00000018563cnot210088.719ENSELUG00000012055CNOT29988.280Esox_lucius
ENSIPUG00000018563cnot210084.601ENSELUG00000007279cnot29985.612Esox_lucius
ENSIPUG00000018563cnot210088.123ENSFCAG00000024278CNOT210096.335Felis_catus
ENSIPUG00000018563cnot210087.739ENSFALG00000010251CNOT210087.311Ficedula_albicollis
ENSIPUG00000018563cnot210087.548ENSFDAG00000008421CNOT210088.791Fukomys_damarensis
ENSIPUG00000018563cnot29885.965ENSFHEG00000009600cnot29885.965Fundulus_heteroclitus
ENSIPUG00000018563cnot210076.937ENSFHEG00000012921-10077.860Fundulus_heteroclitus
ENSIPUG00000018563cnot210089.163ENSGMOG00000016382cnot210089.163Gadus_morhua
ENSIPUG00000018563cnot210087.931ENSGALG00000010042CNOT210087.931Gallus_gallus
ENSIPUG00000018563cnot210076.994ENSGAFG00000018811-10077.079Gambusia_affinis
ENSIPUG00000018563cnot29885.965ENSGAFG00000021852cnot29986.364Gambusia_affinis
ENSIPUG00000018563cnot210075.330ENSGACG00000015711-10075.330Gasterosteus_aculeatus
ENSIPUG00000018563cnot210087.856ENSGACG00000013517cnot210088.425Gasterosteus_aculeatus
ENSIPUG00000018563cnot210088.314ENSGAGG00000025593CNOT29988.046Gopherus_agassizii
ENSIPUG00000018563cnot210088.123ENSGGOG00000027402CNOT210095.604Gorilla_gorilla
ENSIPUG00000018563cnot210081.025ENSHBUG00000016226CNOT210081.214Haplochromis_burtoni
ENSIPUG00000018563cnot210088.697ENSHBUG00000000166cnot210088.697Haplochromis_burtoni
ENSIPUG00000018563cnot210087.931ENSHGLG00000007294CNOT210089.231Heterocephalus_glaber_female
ENSIPUG00000018563cnot210087.931ENSHGLG00100014317CNOT210089.231Heterocephalus_glaber_male
ENSIPUG00000018563cnot210086.069ENSHCOG00000008229cnot210087.405Hippocampus_comes
ENSIPUG00000018563cnot210088.123ENSSTOG00000011114CNOT29987.358Ictidomys_tridecemlineatus
ENSIPUG00000018563cnot210087.931ENSJJAG00000021519Cnot29788.454Jaculus_jaculus
ENSIPUG00000018563cnot210086.424ENSKMAG00000000577cnot210086.424Kryptolebias_marmoratus
ENSIPUG00000018563cnot210075.875ENSKMAG00000008167-10076.427Kryptolebias_marmoratus
ENSIPUG00000018563cnot210089.101ENSLBEG00000004046cnot210089.101Labrus_bergylta
ENSIPUG00000018563cnot210079.818ENSLBEG00000014428-10084.146Labrus_bergylta
ENSIPUG00000018563cnot210087.739ENSLACG00000007016CNOT210087.739Latimeria_chalumnae
ENSIPUG00000018563cnot210091.571ENSLOCG00000016216cnot29991.304Lepisosteus_oculatus
ENSIPUG00000018563cnot210088.123ENSLAFG00000004789CNOT29787.856Loxodonta_africana
ENSIPUG00000018563cnot210088.123ENSMFAG00000034373CNOT29987.759Macaca_fascicularis
ENSIPUG00000018563cnot210088.123ENSMMUG00000014853CNOT29987.713Macaca_mulatta
ENSIPUG00000018563cnot210088.123ENSMNEG00000045426CNOT210096.335Macaca_nemestrina
ENSIPUG00000018563cnot210088.123ENSMLEG00000041145CNOT29987.759Mandrillus_leucophaeus
ENSIPUG00000018563cnot210088.528ENSMAMG00000002615cnot210088.528Mastacembelus_armatus
ENSIPUG00000018563cnot210078.453ENSMAMG00000019519CNOT210088.462Mastacembelus_armatus
ENSIPUG00000018563cnot210088.697ENSMZEG00005017275cnot210089.851Maylandia_zebra
ENSIPUG00000018563cnot210081.025ENSMZEG00005016159CNOT210081.214Maylandia_zebra
ENSIPUG00000018563cnot210081.992ENSMGAG00000010615CNOT29881.051Meleagris_gallopavo
ENSIPUG00000018563cnot210087.931ENSMAUG00000012049Cnot210089.451Mesocricetus_auratus
ENSIPUG00000018563cnot210088.123ENSMICG00000001644CNOT29988.023Microcebus_murinus
ENSIPUG00000018563cnot210088.123ENSMOCG00000011255Cnot210089.451Microtus_ochrogaster
ENSIPUG00000018563cnot210088.719ENSMMOG00000018877cnot210088.719Mola_mola
ENSIPUG00000018563cnot210081.168ENSMMOG00000006017CNOT210082.298Mola_mola
ENSIPUG00000018563cnot210087.548ENSMODG00000020387CNOT29685.767Monodelphis_domestica
ENSIPUG00000018563cnot210078.453ENSMALG00000008200CNOT210079.742Monopterus_albus
ENSIPUG00000018563cnot210088.123ENSMALG00000013354cnot210088.123Monopterus_albus
ENSIPUG00000018563cnot210087.548MGP_CAROLIEiJ_G0015822Cnot29986.792Mus_caroli
ENSIPUG00000018563cnot210087.931ENSMUSG00000020166Cnot210089.231Mus_musculus
ENSIPUG00000018563cnot210087.356MGP_PahariEiJ_G0031265Cnot29986.604Mus_pahari
ENSIPUG00000018563cnot210087.931MGP_SPRETEiJ_G0016644Cnot29987.170Mus_spretus
ENSIPUG00000018563cnot210088.123ENSMPUG00000017494CNOT29787.856Mustela_putorius_furo
ENSIPUG00000018563cnot210088.123ENSMLUG00000012301CNOT29787.856Myotis_lucifugus
ENSIPUG00000018563cnot210087.931ENSNGAG00000020842Cnot210089.231Nannospalax_galili
ENSIPUG00000018563cnot210081.025ENSNBRG00000015257CNOT210081.214Neolamprologus_brichardi
ENSIPUG00000018563cnot210088.123ENSNLEG00000004064CNOT210087.273Nomascus_leucogenys
ENSIPUG00000018563cnot210065.709ENSOPRG00000002600CNOT29765.655Ochotona_princeps
ENSIPUG00000018563cnot210088.123ENSODEG00000004532CNOT29787.856Octodon_degus
ENSIPUG00000018563cnot210079.626ENSONIG00000009907CNOT210080.748Oreochromis_niloticus
ENSIPUG00000018563cnot210088.314ENSONIG00000010467cnot210088.314Oreochromis_niloticus
ENSIPUG00000018563cnot210088.314ENSOANG00000005959CNOT29588.314Ornithorhynchus_anatinus
ENSIPUG00000018563cnot210087.931ENSOCUG00000009951CNOT29587.931Oryctolagus_cuniculus
ENSIPUG00000018563cnot210086.641ENSORLG00000016454cnot29987.835Oryzias_latipes
ENSIPUG00000018563cnot210078.439ENSORLG00000017361CNOT210082.787Oryzias_latipes
ENSIPUG00000018563cnot210078.625ENSORLG00020005328CNOT210082.992Oryzias_latipes_hni
ENSIPUG00000018563cnot210086.260ENSORLG00020009002cnot210085.687Oryzias_latipes_hni
ENSIPUG00000018563cnot28680.717ENSORLG00015022502cnot29780.717Oryzias_latipes_hsok
ENSIPUG00000018563cnot210078.439ENSORLG00015004707CNOT210082.787Oryzias_latipes_hsok
ENSIPUG00000018563cnot210080.000ENSOMEG00000022902CNOT29988.166Oryzias_melastigma
ENSIPUG00000018563cnot210086.042ENSOMEG00000023230cnot210086.042Oryzias_melastigma
ENSIPUG00000018563cnot210087.739ENSOGAG00000008391-9787.476Otolemur_garnettii
ENSIPUG00000018563cnot210072.031ENSOGAG00000031982-10070.556Otolemur_garnettii
ENSIPUG00000018563cnot210087.931ENSOARG00000020211CNOT29787.666Ovis_aries
ENSIPUG00000018563cnot210088.123ENSPPAG00000042482CNOT210088.123Pan_paniscus
ENSIPUG00000018563cnot210088.123ENSPPRG00000004080CNOT210096.335Panthera_pardus
ENSIPUG00000018563cnot210088.123ENSPTIG00000007082CNOT29788.660Panthera_tigris_altaica
ENSIPUG00000018563cnot210088.123ENSPTRG00000005216CNOT29988.660Pan_troglodytes
ENSIPUG00000018563cnot210088.123ENSPANG00000018112CNOT29987.759Papio_anubis
ENSIPUG00000018563cnot210089.847ENSPKIG00000022871CNOT210089.847Paramormyrops_kingsleyae
ENSIPUG00000018563cnot210090.996ENSPKIG00000022757cnot210090.996Paramormyrops_kingsleyae
ENSIPUG00000018563cnot210088.506ENSPSIG00000015414CNOT210088.506Pelodiscus_sinensis
ENSIPUG00000018563cnot27688.496ENSPMGG00000016559CNOT210088.496Periophthalmus_magnuspinnatus
ENSIPUG00000018563cnot210083.112ENSPMGG00000009456cnot210083.681Periophthalmus_magnuspinnatus
ENSIPUG00000018563cnot210087.931ENSPEMG00000023296Cnot210089.231Peromyscus_maniculatus_bairdii
ENSIPUG00000018563cnot210070.833ENSPMAG00000002220cnot210070.833Petromyzon_marinus
ENSIPUG00000018563cnot210087.165ENSPCIG00000010670CNOT29887.097Phascolarctos_cinereus
ENSIPUG00000018563cnot29885.965ENSPFOG00000012236cnot29885.965Poecilia_formosa
ENSIPUG00000018563cnot210076.909ENSPFOG00000015440-10076.994Poecilia_formosa
ENSIPUG00000018563cnot29885.770ENSPLAG00000006094cnot29885.770Poecilia_latipinna
ENSIPUG00000018563cnot210076.909ENSPLAG00000007644-10076.994Poecilia_latipinna
ENSIPUG00000018563cnot210076.766ENSPMEG00000023331-9788.690Poecilia_mexicana
ENSIPUG00000018563cnot29885.965ENSPMEG00000012236cnot29885.965Poecilia_mexicana
ENSIPUG00000018563cnot210077.138ENSPREG00000006034CNOT210077.881Poecilia_reticulata
ENSIPUG00000018563cnot29885.965ENSPREG00000020804cnot29885.965Poecilia_reticulata
ENSIPUG00000018563cnot28888.017ENSPPYG00000004765CNOT29888.017Pongo_abelii
ENSIPUG00000018563cnot210088.123ENSPCAG00000000962CNOT29787.856Procavia_capensis
ENSIPUG00000018563cnot210088.123ENSPCOG00000028865CNOT29988.095Propithecus_coquereli
ENSIPUG00000018563cnot210080.268ENSPVAG00000007074CNOT29780.076Pteropus_vampyrus
ENSIPUG00000018563cnot210081.025ENSPNYG00000009888CNOT210081.214Pundamilia_nyererei
ENSIPUG00000018563cnot210088.697ENSPNYG00000021545cnot210088.697Pundamilia_nyererei
ENSIPUG00000018563cnot210098.462ENSPNAG00000015107cnot210098.462Pygocentrus_nattereri
ENSIPUG00000018563cnot210089.655ENSPNAG00000021540CNOT29989.655Pygocentrus_nattereri
ENSIPUG00000018563cnot210087.931ENSRNOG00000004909Cnot29989.019Rattus_norvegicus
ENSIPUG00000018563cnot210088.123ENSRBIG00000039989CNOT210096.335Rhinopithecus_bieti
ENSIPUG00000018563cnot210088.123ENSRROG00000042572CNOT210088.123Rhinopithecus_roxellana
ENSIPUG00000018563cnot210088.123ENSSBOG00000026423CNOT29988.660Saimiri_boliviensis_boliviensis
ENSIPUG00000018563cnot210087.356ENSSHAG00000005001CNOT210085.055Sarcophilus_harrisii
ENSIPUG00000018563cnot210092.146ENSSFOG00015005243cnot210092.146Scleropages_formosus
ENSIPUG00000018563cnot210091.188ENSSFOG00015017789CNOT210091.188Scleropages_formosus
ENSIPUG00000018563cnot210079.096ENSSMAG00000006667CNOT210080.226Scophthalmus_maximus
ENSIPUG00000018563cnot210088.571ENSSMAG00000009857cnot210088.000Scophthalmus_maximus
ENSIPUG00000018563cnot210090.057ENSSDUG00000020166cnot210090.057Seriola_dumerili
ENSIPUG00000018563cnot210079.558ENSSDUG00000013716CNOT210080.479Seriola_dumerili
ENSIPUG00000018563cnot29578.988ENSSLDG00000009614-9979.767Seriola_lalandi_dorsalis
ENSIPUG00000018563cnot210090.057ENSSLDG00000010952cnot210090.057Seriola_lalandi_dorsalis
ENSIPUG00000018563cnot28888.913ENSSARG00000001038CNOT28588.913Sorex_araneus
ENSIPUG00000018563cnot210078.928ENSSPAG00000013982-9691.692Stegastes_partitus
ENSIPUG00000018563cnot28791.131ENSSPAG00000006784cnot210091.131Stegastes_partitus
ENSIPUG00000018563cnot210088.123ENSSSCG00000000502CNOT210089.451Sus_scrofa
ENSIPUG00000018563cnot210087.739ENSTGUG00000007018CNOT210087.643Taeniopygia_guttata
ENSIPUG00000018563cnot210088.123ENSTRUG00000002924cnot210088.123Takifugu_rubripes
ENSIPUG00000018563cnot210088.123ENSTNIG00000008354cnot210085.609Tetraodon_nigroviridis
ENSIPUG00000018563cnot210077.632ENSTNIG00000002496CNOT29877.467Tetraodon_nigroviridis
ENSIPUG00000018563cnot210084.542ENSTTRG00000004829CNOT29784.310Tursiops_truncatus
ENSIPUG00000018563cnot210088.123ENSUAMG00000016753CNOT210088.123Ursus_americanus
ENSIPUG00000018563cnot210088.123ENSUMAG00000020863CNOT29987.358Ursus_maritimus
ENSIPUG00000018563cnot210085.632ENSVPAG00000006870CNOT29785.389Vicugna_pacos
ENSIPUG00000018563cnot29988.008ENSVVUG00000008840CNOT29987.702Vulpes_vulpes
ENSIPUG00000018563cnot210081.298ENSXETG00000011385cnot210087.500Xenopus_tropicalis
ENSIPUG00000018563cnot26291.718ENSXCOG00000013026CNOT210088.757Xiphophorus_couchianus
ENSIPUG00000018563cnot29087.607ENSXCOG00000002160cnot29987.603Xiphophorus_couchianus
ENSIPUG00000018563cnot210076.623ENSXMAG00000010366CNOT29688.757Xiphophorus_maculatus
ENSIPUG00000018563cnot29885.965ENSXMAG00000019279cnot29885.965Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us