EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000018571 (Gene tree)
Gene ID: 108263146
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 53359 bases
Position: chr3:11718024-11771382
Accession: 108263146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000027438	RRM_1	PF00076.22	1e-10	1	1
ENSIPUP00000027412	RRM_1	PF00076.22	1.1e-10	1	1
ENSIPUP00000027428	RRM_1	PF00076.22	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000028530	-	2028	XM_017463645	ENSIPUP00000027412	675 (aa)	XP_017319134	A0A2D0QLG7
ENSIPUT00000028556	-	2779	XM_017463641	ENSIPUP00000027438	658 (aa)	XP_017319130	A0A2D0QNW1
ENSIPUT00000028546	-	3053	XM_017463642	ENSIPUP00000027428	709 (aa)	XP_017319131	A0A2D0QN25

Gene Model

Click here to download ENSIPUG00000018571's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04114	Oocyte meiosis	KEGG
ipu04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000018571	cpeb3	99	59.361	ENSIPUG00000001181	CPEB2	73	63.361
ENSIPUG00000018571	cpeb3	98	57.265	ENSIPUG00000005518	cpeb4	100	55.336
ENSIPUG00000018571	cpeb3	91	61.049	ENSIPUG00000010268	cpeb4a	92	57.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018571	cpeb3	100	71.369	ENSG00000107864	CPEB3	100	72.663	Homo_sapiens
ENSIPUG00000018571	cpeb3	100	80.848	ENSAPOG00000003625	cpeb3	100	82.074	Acanthochromis_polyacanthus
ENSIPUG00000018571	cpeb3	100	75.837	ENSAMEG00000014204	CPEB3	100	75.474	Ailuropoda_melanoleuca
ENSIPUG00000018571	cpeb3	100	82.310	ENSACIG00000001933	cpeb3	100	82.258	Amphilophus_citrinellus
ENSIPUG00000018571	cpeb3	100	80.994	ENSAOCG00000015423	cpeb3	100	81.232	Amphiprion_ocellaris
ENSIPUG00000018571	cpeb3	100	79.124	ENSATEG00000010649	cpeb3	100	79.971	Anabas_testudineus
ENSIPUG00000018571	cpeb3	100	81.057	ENSACAG00000006335	CPEB3	100	80.323	Anolis_carolinensis
ENSIPUG00000018571	cpeb3	100	73.816	ENSANAG00000037406	CPEB3	100	73.816	Aotus_nancymaae
ENSIPUG00000018571	cpeb3	100	82.551	ENSACLG00000018590	cpeb3	92	80.742	Astatotilapia_calliptera
ENSIPUG00000018571	cpeb3	100	72.829	ENSBTAG00000015450	CPEB3	93	95.987	Bos_taurus
ENSIPUG00000018571	cpeb3	100	73.846	ENSCJAG00000008495	CPEB3	100	73.846	Callithrix_jacchus
ENSIPUG00000018571	cpeb3	100	71.569	ENSCAFG00000007423	CPEB3	100	72.340	Canis_familiaris
ENSIPUG00000018571	cpeb3	100	73.883	ENSCAFG00020001981	CPEB3	91	96.000	Canis_lupus_dingo
ENSIPUG00000018571	cpeb3	100	74.895	ENSCHIG00000017337	CPEB3	100	74.685	Capra_hircus
ENSIPUG00000018571	cpeb3	86	86.111	ENSTSYG00000003928	CPEB3	83	87.500	Carlito_syrichta
ENSIPUG00000018571	cpeb3	100	73.955	ENSCCAG00000033267	CPEB3	100	73.398	Cebus_capucinus
ENSIPUG00000018571	cpeb3	100	73.889	ENSCATG00000038447	CPEB3	100	73.611	Cercocebus_atys
ENSIPUG00000018571	cpeb3	71	86.412	ENSCLAG00000011817	CPEB3	93	88.791	Chinchilla_lanigera
ENSIPUG00000018571	cpeb3	100	70.670	ENSCSAG00000006579	CPEB3	100	71.368	Chlorocebus_sabaeus
ENSIPUG00000018571	cpeb3	57	77.573	ENSCHOG00000000272	-	100	79.245	Choloepus_hoffmanni
ENSIPUG00000018571	cpeb3	100	82.448	ENSCPBG00000023779	CPEB3	100	82.006	Chrysemys_picta_bellii
ENSIPUG00000018571	cpeb3	100	73.816	ENSCANG00000040306	CPEB3	100	73.816	Colobus_angolensis_palliatus
ENSIPUG00000018571	cpeb3	100	74.616	ENSCGRG00001003846	Cpeb3	100	74.126	Cricetulus_griseus_chok1gshd
ENSIPUG00000018571	cpeb3	64	88.152	ENSCGRG00000002839	Cpeb3	100	89.880	Cricetulus_griseus_crigri
ENSIPUG00000018571	cpeb3	90	76.526	ENSCSEG00000008423	cpeb3	100	77.496	Cynoglossus_semilaevis
ENSIPUG00000018571	cpeb3	100	79.254	ENSCVAG00000005998	cpeb3	100	78.955	Cyprinodon_variegatus
ENSIPUG00000018571	cpeb3	100	75.113	ENSDARG00000060103	cpeb3	100	72.496	Danio_rerio
ENSIPUG00000018571	cpeb3	100	69.274	ENSDNOG00000048639	CPEB3	100	69.547	Dasypus_novemcinctus
ENSIPUG00000018571	cpeb3	92	87.975	ENSDORG00000028940	Cpeb3	86	88.602	Dipodomys_ordii
ENSIPUG00000018571	cpeb3	100	68.592	ENSETEG00000000111	CPEB3	100	69.516	Echinops_telfairi
ENSIPUG00000018571	cpeb3	90	67.095	ENSEBUG00000010745	cpeb3	99	57.179	Eptatretus_burgeri
ENSIPUG00000018571	cpeb3	100	74.652	ENSEASG00005011095	CPEB3	100	74.162	Equus_asinus_asinus
ENSIPUG00000018571	cpeb3	100	74.756	ENSECAG00000000077	CPEB3	100	74.685	Equus_caballus
ENSIPUG00000018571	cpeb3	100	82.132	ENSELUG00000019251	cpeb3	100	81.639	Esox_lucius
ENSIPUG00000018571	cpeb3	100	75.000	ENSFCAG00000032380	CPEB3	100	74.790	Felis_catus
ENSIPUG00000018571	cpeb3	100	79.559	ENSFALG00000007952	CPEB3	87	79.148	Ficedula_albicollis
ENSIPUG00000018571	cpeb3	87	90.069	ENSFDAG00000016459	CPEB3	86	89.796	Fukomys_damarensis
ENSIPUG00000018571	cpeb3	100	78.198	ENSFHEG00000021371	cpeb3	100	79.265	Fundulus_heteroclitus
ENSIPUG00000018571	cpeb3	89	81.008	ENSGMOG00000008307	cpeb3	100	81.500	Gadus_morhua
ENSIPUG00000018571	cpeb3	100	81.672	ENSGALG00000006912	CPEB3	100	81.232	Gallus_gallus
ENSIPUG00000018571	cpeb3	99	80.798	ENSGACG00000002944	cpeb3	100	80.588	Gasterosteus_aculeatus
ENSIPUG00000018571	cpeb3	100	82.006	ENSGAGG00000008528	CPEB3	100	81.416	Gopherus_agassizii
ENSIPUG00000018571	cpeb3	100	73.883	ENSGGOG00000016441	CPEB3	100	74.022	Gorilla_gorilla
ENSIPUG00000018571	cpeb3	100	81.938	ENSHBUG00000004097	cpeb3	95	81.476	Haplochromis_burtoni
ENSIPUG00000018571	cpeb3	100	74.722	ENSHGLG00000014022	CPEB3	100	74.652	Heterocephalus_glaber_female
ENSIPUG00000018571	cpeb3	100	74.855	ENSHGLG00100005200	CPEB3	100	74.493	Heterocephalus_glaber_male
ENSIPUG00000018571	cpeb3	100	79.730	ENSHCOG00000005747	cpeb3	100	79.730	Hippocampus_comes
ENSIPUG00000018571	cpeb3	100	75.391	ENSSTOG00000028061	CPEB3	100	75.464	Ictidomys_tridecemlineatus
ENSIPUG00000018571	cpeb3	64	88.389	ENSJJAG00000009135	Cpeb3	100	90.120	Jaculus_jaculus
ENSIPUG00000018571	cpeb3	100	82.258	ENSLBEG00000025961	cpeb3	100	83.088	Labrus_bergylta
ENSIPUG00000018571	cpeb3	100	79.398	ENSLACG00000011307	CPEB3	100	72.376	Latimeria_chalumnae
ENSIPUG00000018571	cpeb3	100	82.692	ENSLOCG00000007131	cpeb3	100	81.913	Lepisosteus_oculatus
ENSIPUG00000018571	cpeb3	100	76.720	ENSLAFG00000018716	CPEB3	92	85.529	Loxodonta_africana
ENSIPUG00000018571	cpeb3	100	71.182	ENSMFAG00000025613	CPEB3	90	86.404	Macaca_fascicularis
ENSIPUG00000018571	cpeb3	100	74.234	ENSMMUG00000015050	CPEB3	100	73.955	Macaca_mulatta
ENSIPUG00000018571	cpeb3	100	73.786	ENSMNEG00000045465	CPEB3	100	73.509	Macaca_nemestrina
ENSIPUG00000018571	cpeb3	97	86.111	ENSMLEG00000031794	CPEB3	98	87.500	Mandrillus_leucophaeus
ENSIPUG00000018571	cpeb3	100	81.022	ENSMAMG00000012794	cpeb3	100	81.560	Mastacembelus_armatus
ENSIPUG00000018571	cpeb3	100	82.551	ENSMZEG00005012068	cpeb3	100	81.965	Maylandia_zebra
ENSIPUG00000018571	cpeb3	100	79.676	ENSMGAG00000009148	CPEB3	100	79.356	Meleagris_gallopavo
ENSIPUG00000018571	cpeb3	100	74.238	ENSMAUG00000002789	Cpeb3	100	73.889	Mesocricetus_auratus
ENSIPUG00000018571	cpeb3	100	74.790	ENSMICG00000026866	CPEB3	100	73.876	Microcebus_murinus
ENSIPUG00000018571	cpeb3	100	74.444	ENSMOCG00000016486	Cpeb3	100	74.095	Microtus_ochrogaster
ENSIPUG00000018571	cpeb3	97	76.783	ENSMMOG00000008209	cpeb3	88	79.385	Mola_mola
ENSIPUG00000018571	cpeb3	100	81.029	ENSMALG00000009305	cpeb3	89	98.997	Monopterus_albus
ENSIPUG00000018571	cpeb3	100	74.238	MGP_CAROLIEiJ_G0022910	Cpeb3	100	90.120	Mus_caroli
ENSIPUG00000018571	cpeb3	100	74.652	ENSMUSG00000039652	Cpeb3	100	90.120	Mus_musculus
ENSIPUG00000018571	cpeb3	100	74.480	MGP_PahariEiJ_G0014405	Cpeb3	100	90.120	Mus_pahari
ENSIPUG00000018571	cpeb3	100	74.341	MGP_SPRETEiJ_G0023829	Cpeb3	100	90.120	Mus_spretus
ENSIPUG00000018571	cpeb3	100	72.727	ENSMPUG00000017227	CPEB3	100	72.511	Mustela_putorius_furo
ENSIPUG00000018571	cpeb3	100	74.930	ENSNGAG00000015621	Cpeb3	100	74.719	Nannospalax_galili
ENSIPUG00000018571	cpeb3	100	77.909	ENSNBRG00000018343	cpeb3	100	74.832	Neolamprologus_brichardi
ENSIPUG00000018571	cpeb3	100	74.059	ENSNLEG00000012600	CPEB3	100	74.198	Nomascus_leucogenys
ENSIPUG00000018571	cpeb3	79	82.850	ENSMEUG00000009948	-	75	84.636	Notamacropus_eugenii
ENSIPUG00000018571	cpeb3	100	73.525	ENSODEG00000004591	CPEB3	100	73.177	Octodon_degus
ENSIPUG00000018571	cpeb3	50	93.636	ENSOANG00000015723	-	100	93.636	Ornithorhynchus_anatinus
ENSIPUG00000018571	cpeb3	100	74.685	ENSOCUG00000010454	CPEB3	100	74.194	Oryctolagus_cuniculus
ENSIPUG00000018571	cpeb3	100	75.224	ENSORLG00000000726	cpeb3	100	76.169	Oryzias_latipes
ENSIPUG00000018571	cpeb3	100	76.233	ENSORLG00020004475	cpeb3	100	77.130	Oryzias_latipes_hni
ENSIPUG00000018571	cpeb3	100	77.612	ENSORLG00015011683	cpeb3	100	79.336	Oryzias_latipes_hsok
ENSIPUG00000018571	cpeb3	100	76.912	ENSOMEG00000018265	cpeb3	100	73.082	Oryzias_melastigma
ENSIPUG00000018571	cpeb3	100	70.868	ENSOGAG00000002002	CPEB3	100	71.853	Otolemur_garnettii
ENSIPUG00000018571	cpeb3	100	71.669	ENSOARG00000016671	CPEB3	100	72.443	Ovis_aries
ENSIPUG00000018571	cpeb3	71	83.932	ENSPPAG00000031528	CPEB3	75	86.184	Pan_paniscus
ENSIPUG00000018571	cpeb3	100	71.669	ENSPPRG00000015654	CPEB3	100	72.443	Panthera_pardus
ENSIPUG00000018571	cpeb3	68	85.841	ENSPTIG00000012018	CPEB3	97	95.862	Panthera_tigris_altaica
ENSIPUG00000018571	cpeb3	100	73.677	ENSPTRG00000002753	CPEB3	100	74.022	Pan_troglodytes
ENSIPUG00000018571	cpeb3	100	71.871	ENSPANG00000021561	CPEB3	100	73.115	Papio_anubis
ENSIPUG00000018571	cpeb3	100	87.936	ENSPKIG00000015878	cpeb3	100	86.919	Paramormyrops_kingsleyae
ENSIPUG00000018571	cpeb3	100	69.806	ENSPMGG00000022722	cpeb3	100	70.997	Periophthalmus_magnuspinnatus
ENSIPUG00000018571	cpeb3	100	74.583	ENSPEMG00000008448	Cpeb3	100	74.373	Peromyscus_maniculatus_bairdii
ENSIPUG00000018571	cpeb3	100	73.187	ENSPCIG00000017302	CPEB3	100	73.461	Phascolarctos_cinereus
ENSIPUG00000018571	cpeb3	100	75.668	ENSPFOG00000011231	cpeb3	100	76.558	Poecilia_formosa
ENSIPUG00000018571	cpeb3	100	79.416	ENSPLAG00000002852	cpeb3	100	80.564	Poecilia_latipinna
ENSIPUG00000018571	cpeb3	100	78.394	ENSPMEG00000021572	cpeb3	100	79.970	Poecilia_mexicana
ENSIPUG00000018571	cpeb3	100	78.832	ENSPREG00000003085	cpeb3	100	80.205	Poecilia_reticulata
ENSIPUG00000018571	cpeb3	100	67.321	ENSPPYG00000002481	CPEB3	100	68.272	Pongo_abelii
ENSIPUG00000018571	cpeb3	100	67.773	ENSPCAG00000012417	CPEB3	100	68.022	Procavia_capensis
ENSIPUG00000018571	cpeb3	100	74.298	ENSPCOG00000023690	CPEB3	100	74.579	Propithecus_coquereli
ENSIPUG00000018571	cpeb3	83	86.280	ENSPVAG00000007664	CPEB3	74	88.140	Pteropus_vampyrus
ENSIPUG00000018571	cpeb3	100	81.938	ENSPNYG00000005300	cpeb3	100	82.085	Pundamilia_nyererei
ENSIPUG00000018571	cpeb3	100	87.000	ENSPNAG00000012111	cpeb3	100	86.857	Pygocentrus_nattereri
ENSIPUG00000018571	cpeb3	100	70.805	ENSRNOG00000020689	Cpeb3	95	69.542	Rattus_norvegicus
ENSIPUG00000018571	cpeb3	100	73.640	ENSRBIG00000041079	CPEB3	100	73.883	Rhinopithecus_bieti
ENSIPUG00000018571	cpeb3	100	73.640	ENSRROG00000031558	CPEB3	100	73.883	Rhinopithecus_roxellana
ENSIPUG00000018571	cpeb3	67	82.927	ENSSBOG00000035843	CPEB3	100	84.459	Saimiri_boliviensis_boliviensis
ENSIPUG00000018571	cpeb3	66	72.665	ENSSFOG00015018275	-	100	73.782	Scleropages_formosus
ENSIPUG00000018571	cpeb3	100	78.409	ENSSFOG00015004974	cpeb3	100	77.434	Scleropages_formosus
ENSIPUG00000018571	cpeb3	100	79.412	ENSSMAG00000013924	cpeb3	100	82.021	Scophthalmus_maximus
ENSIPUG00000018571	cpeb3	100	76.580	ENSSDUG00000019766	cpeb3	100	78.603	Seriola_dumerili
ENSIPUG00000018571	cpeb3	100	80.085	ENSSLDG00000021438	cpeb3	100	81.027	Seriola_lalandi_dorsalis
ENSIPUG00000018571	cpeb3	57	86.807	ENSSARG00000001994	CPEB3	100	88.679	Sorex_araneus
ENSIPUG00000018571	cpeb3	100	80.519	ENSSPAG00000004725	cpeb3	100	81.466	Stegastes_partitus
ENSIPUG00000018571	cpeb3	100	74.171	ENSSSCG00000010468	CPEB3	100	73.810	Sus_scrofa
ENSIPUG00000018571	cpeb3	100	81.672	ENSTGUG00000008988	CPEB3	100	81.204	Taeniopygia_guttata
ENSIPUG00000018571	cpeb3	65	79.398	ENSTBEG00000013125	-	60	80.896	Tupaia_belangeri
ENSIPUG00000018571	cpeb3	100	70.112	ENSTTRG00000012334	CPEB3	100	70.963	Tursiops_truncatus
ENSIPUG00000018571	cpeb3	100	73.596	ENSUAMG00000010827	CPEB3	96	86.047	Ursus_americanus
ENSIPUG00000018571	cpeb3	100	72.727	ENSVVUG00000021375	CPEB3	100	72.511	Vulpes_vulpes
ENSIPUG00000018571	cpeb3	100	74.667	ENSXETG00000012190	cpeb3	99	73.855	Xenopus_tropicalis
ENSIPUG00000018571	cpeb3	100	74.307	ENSXCOG00000006122	cpeb3	100	75.744	Xiphophorus_couchianus
ENSIPUG00000018571	cpeb3	100	76.135	ENSXMAG00000007652	cpeb3	94	97.945	Xiphophorus_maculatus