EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000018661 (Gene tree)
Gene ID: 100528460
Gene Symbol: c1d
Alias: -
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 13150 bases
Position: chrKV453358.1:297067-310216
Accession: 100528460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000027563	Sas10_Utp3	PF04000.15	6.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000028684	-	3166	XM_017461857	ENSIPUP00000027563	143 (aa)	XP_017317346	A0A2D0QGA0

Gene Model

Click here to download ENSIPUG00000018661's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018661	c1d	85	63.415	ENSG00000197223	C1D	87	63.415	Homo_sapiens
ENSIPUG00000018661	c1d	100	63.194	ENSAPOG00000005466	c1d	96	64.336	Acanthochromis_polyacanthus
ENSIPUG00000018661	c1d	92	60.902	ENSAMEG00000004859	C1D	89	60.902	Ailuropoda_melanoleuca
ENSIPUG00000018661	c1d	97	66.906	ENSACIG00000012684	c1d	88	66.906	Amphilophus_citrinellus
ENSIPUG00000018661	c1d	95	65.693	ENSAOCG00000020354	c1d	91	65.693	Amphiprion_ocellaris
ENSIPUG00000018661	c1d	94	66.912	ENSAPEG00000001403	c1d	86	66.912	Amphiprion_percula
ENSIPUG00000018661	c1d	85	70.732	ENSATEG00000012922	c1d	79	70.732	Anabas_testudineus
ENSIPUG00000018661	c1d	84	63.636	ENSAPLG00000009320	C1D	83	63.636	Anas_platyrhynchos
ENSIPUG00000018661	c1d	83	65.546	ENSACAG00000001337	C1D	98	65.546	Anolis_carolinensis
ENSIPUG00000018661	c1d	92	60.150	ENSANAG00000035972	-	92	60.150	Aotus_nancymaae
ENSIPUG00000018661	c1d	92	58.647	ENSANAG00000005773	-	92	58.647	Aotus_nancymaae
ENSIPUG00000018661	c1d	85	68.852	ENSACLG00000026206	c1d	88	65.926	Astatotilapia_calliptera
ENSIPUG00000018661	c1d	100	73.103	ENSAMXG00000043212	c1d	100	73.103	Astyanax_mexicanus
ENSIPUG00000018661	c1d	92	60.902	ENSBTAG00000049002	C1D	92	60.902	Bos_taurus
ENSIPUG00000018661	c1d	77	57.658	ENSCJAG00000044668	-	87	57.658	Callithrix_jacchus
ENSIPUG00000018661	c1d	92	60.902	ENSCJAG00000006589	C1D	86	60.902	Callithrix_jacchus
ENSIPUG00000018661	c1d	92	62.406	ENSCAFG00000030099	C1D	92	62.406	Canis_familiaris
ENSIPUG00000018661	c1d	92	62.406	ENSCAFG00020026997	C1D	92	62.406	Canis_lupus_dingo
ENSIPUG00000018661	c1d	92	60.902	ENSCHIG00000025729	C1D	92	60.902	Capra_hircus
ENSIPUG00000018661	c1d	92	60.150	ENSTSYG00000035739	-	92	60.150	Carlito_syrichta
ENSIPUG00000018661	c1d	81	58.120	ENSTSYG00000026573	-	75	58.120	Carlito_syrichta
ENSIPUG00000018661	c1d	78	57.522	ENSCAPG00000011523	-	94	57.522	Cavia_aperea
ENSIPUG00000018661	c1d	78	57.522	ENSCPOG00000020112	-	94	57.522	Cavia_porcellus
ENSIPUG00000018661	c1d	93	61.194	ENSCPOG00000037986	-	93	61.194	Cavia_porcellus
ENSIPUG00000018661	c1d	92	60.902	ENSCCAG00000030405	-	92	60.902	Cebus_capucinus
ENSIPUG00000018661	c1d	92	59.398	ENSCATG00000043348	-	92	59.398	Cercocebus_atys
ENSIPUG00000018661	c1d	92	60.150	ENSCATG00000045336	C1D	92	60.150	Cercocebus_atys
ENSIPUG00000018661	c1d	100	57.639	ENSCLAG00000011883	C1D	100	57.639	Chinchilla_lanigera
ENSIPUG00000018661	c1d	92	60.150	ENSCSAG00000014811	C1D	92	60.150	Chlorocebus_sabaeus
ENSIPUG00000018661	c1d	100	58.333	ENSCHOG00000006719	C1D	79	58.333	Choloepus_hoffmanni
ENSIPUG00000018661	c1d	100	60.274	ENSCPBG00000014451	C1D	99	60.274	Chrysemys_picta_bellii
ENSIPUG00000018661	c1d	80	43.103	ENSCING00000020906	-	64	42.623	Ciona_intestinalis
ENSIPUG00000018661	c1d	82	42.373	ENSCSAVG00000000150	-	67	42.373	Ciona_savignyi
ENSIPUG00000018661	c1d	92	59.398	ENSCANG00000035564	C1D	92	59.398	Colobus_angolensis_palliatus
ENSIPUG00000018661	c1d	85	54.472	ENSCANG00000036599	-	100	54.472	Colobus_angolensis_palliatus
ENSIPUG00000018661	c1d	87	62.698	ENSCGRG00001023376	C1d	89	62.698	Cricetulus_griseus_chok1gshd
ENSIPUG00000018661	c1d	87	62.698	ENSCGRG00000010245	C1d	89	62.698	Cricetulus_griseus_crigri
ENSIPUG00000018661	c1d	85	67.480	ENSCSEG00000000587	c1d	86	67.480	Cynoglossus_semilaevis
ENSIPUG00000018661	c1d	96	61.594	ENSCVAG00000004603	c1d	90	61.594	Cyprinodon_variegatus
ENSIPUG00000018661	c1d	85	73.171	ENSDARG00000021112	c1d	97	68.056	Danio_rerio
ENSIPUG00000018661	c1d	100	52.778	ENSDNOG00000046068	-	100	52.778	Dasypus_novemcinctus
ENSIPUG00000018661	c1d	90	60.465	ENSDORG00000003300	C1d	91	60.465	Dipodomys_ordii
ENSIPUG00000018661	c1d	59	70.588	ENSETEG00000014857	C1D	86	70.588	Echinops_telfairi
ENSIPUG00000018661	c1d	82	49.153	ENSEBUG00000006874	c1d	74	49.153	Eptatretus_burgeri
ENSIPUG00000018661	c1d	92	60.902	ENSEASG00005007307	C1D	84	60.902	Equus_asinus_asinus
ENSIPUG00000018661	c1d	92	60.902	ENSECAG00000002187	C1D	93	60.902	Equus_caballus
ENSIPUG00000018661	c1d	85	68.293	ENSELUG00000014823	c1d	84	68.293	Esox_lucius
ENSIPUG00000018661	c1d	92	60.902	ENSFCAG00000028933	C1D	92	60.902	Felis_catus
ENSIPUG00000018661	c1d	84	63.636	ENSFALG00000013640	C1D	73	63.636	Ficedula_albicollis
ENSIPUG00000018661	c1d	92	50.746	ENSFDAG00000014175	-	91	50.746	Fukomys_damarensis
ENSIPUG00000018661	c1d	85	63.415	ENSFDAG00000010462	-	87	63.415	Fukomys_damarensis
ENSIPUG00000018661	c1d	99	61.268	ENSFHEG00000010545	c1d	99	61.268	Fundulus_heteroclitus
ENSIPUG00000018661	c1d	80	62.931	ENSGMOG00000013911	-	92	62.931	Gadus_morhua
ENSIPUG00000018661	c1d	100	57.931	ENSGALG00000008765	C1D	99	57.931	Gallus_gallus
ENSIPUG00000018661	c1d	80	69.828	ENSGAFG00000012578	c1d	74	69.828	Gambusia_affinis
ENSIPUG00000018661	c1d	85	66.667	ENSGACG00000011981	c1d	96	66.667	Gasterosteus_aculeatus
ENSIPUG00000018661	c1d	90	64.394	ENSGAGG00000013383	C1D	99	60.959	Gopherus_agassizii
ENSIPUG00000018661	c1d	92	60.902	ENSGGOG00000025982	-	72	60.902	Gorilla_gorilla
ENSIPUG00000018661	c1d	92	57.895	ENSGGOG00000025808	-	74	57.895	Gorilla_gorilla
ENSIPUG00000018661	c1d	92	59.398	ENSGGOG00000022296	-	92	59.398	Gorilla_gorilla
ENSIPUG00000018661	c1d	80	70.690	ENSHBUG00000018531	c1d	75	67.442	Haplochromis_burtoni
ENSIPUG00000018661	c1d	92	60.902	ENSHGLG00000012332	-	99	58.451	Heterocephalus_glaber_female
ENSIPUG00000018661	c1d	85	56.557	ENSHGLG00000021219	-	87	56.557	Heterocephalus_glaber_female
ENSIPUG00000018661	c1d	85	57.377	ENSHGLG00100019951	-	87	57.377	Heterocephalus_glaber_male
ENSIPUG00000018661	c1d	93	60.448	ENSHGLG00100000221	-	93	59.701	Heterocephalus_glaber_male
ENSIPUG00000018661	c1d	83	64.167	ENSHCOG00000014568	C1D	82	64.167	Hippocampus_comes
ENSIPUG00000018661	c1d	83	64.167	ENSHCOG00000014589	c1d	82	64.167	Hippocampus_comes
ENSIPUG00000018661	c1d	92	61.654	ENSSTOG00000012346	C1D	92	61.654	Ictidomys_tridecemlineatus
ENSIPUG00000018661	c1d	81	58.974	ENSJJAG00000023186	-	89	58.974	Jaculus_jaculus
ENSIPUG00000018661	c1d	92	52.632	ENSJJAG00000005044	-	94	52.632	Jaculus_jaculus
ENSIPUG00000018661	c1d	92	50.758	ENSJJAG00000016086	-	93	51.515	Jaculus_jaculus
ENSIPUG00000018661	c1d	92	56.391	ENSJJAG00000009540	-	94	56.391	Jaculus_jaculus
ENSIPUG00000018661	c1d	96	64.493	ENSKMAG00000015077	c1d	90	64.493	Kryptolebias_marmoratus
ENSIPUG00000018661	c1d	85	67.480	ENSLBEG00000008351	c1d	79	67.480	Labrus_bergylta
ENSIPUG00000018661	c1d	99	60.690	ENSLACG00000007516	C1D	97	60.690	Latimeria_chalumnae
ENSIPUG00000018661	c1d	99	62.500	ENSLOCG00000016024	c1d	98	62.500	Lepisosteus_oculatus
ENSIPUG00000018661	c1d	92	60.606	ENSLAFG00000002083	C1D	91	60.606	Loxodonta_africana
ENSIPUG00000018661	c1d	92	60.150	ENSMFAG00000034261	C1D	92	60.150	Macaca_fascicularis
ENSIPUG00000018661	c1d	92	59.398	ENSMFAG00000028681	-	92	59.398	Macaca_fascicularis
ENSIPUG00000018661	c1d	92	59.398	ENSMFAG00000034034	-	92	59.398	Macaca_fascicularis
ENSIPUG00000018661	c1d	92	60.150	ENSMMUG00000041557	C1D	94	60.150	Macaca_mulatta
ENSIPUG00000018661	c1d	92	58.647	ENSMMUG00000043184	-	92	58.647	Macaca_mulatta
ENSIPUG00000018661	c1d	92	59.398	ENSMMUG00000017209	-	92	59.398	Macaca_mulatta
ENSIPUG00000018661	c1d	92	60.150	ENSMNEG00000040612	C1D	92	60.150	Macaca_nemestrina
ENSIPUG00000018661	c1d	92	59.398	ENSMNEG00000020626	-	92	59.398	Macaca_nemestrina
ENSIPUG00000018661	c1d	92	60.150	ENSMLEG00000027619	C1D	92	60.150	Mandrillus_leucophaeus
ENSIPUG00000018661	c1d	92	59.398	ENSMLEG00000028412	-	92	59.398	Mandrillus_leucophaeus
ENSIPUG00000018661	c1d	90	63.846	ENSMAMG00000022156	c1d	85	64.122	Mastacembelus_armatus
ENSIPUG00000018661	c1d	80	70.690	ENSMZEG00005027343	c1d	86	67.442	Maylandia_zebra
ENSIPUG00000018661	c1d	100	57.931	ENSMGAG00000004517	C1D	100	57.931	Meleagris_gallopavo
ENSIPUG00000018661	c1d	94	58.824	ENSMAUG00000008974	C1d	89	62.698	Mesocricetus_auratus
ENSIPUG00000018661	c1d	100	57.639	ENSMICG00000032141	C1D	100	57.639	Microcebus_murinus
ENSIPUG00000018661	c1d	87	62.698	ENSMOCG00000010860	C1d	89	62.698	Microtus_ochrogaster
ENSIPUG00000018661	c1d	90	64.341	ENSMMOG00000007332	c1d	88	63.281	Mola_mola
ENSIPUG00000018661	c1d	94	62.774	ENSMODG00000003561	C1D	96	62.774	Monodelphis_domestica
ENSIPUG00000018661	c1d	94	66.912	ENSMALG00000020864	c1d	96	68.000	Monopterus_albus
ENSIPUG00000018661	c1d	87	62.698	MGP_CAROLIEiJ_G0016110	C1d	100	62.712	Mus_caroli
ENSIPUG00000018661	c1d	87	62.698	ENSMUSG00000000581	C1d	100	62.712	Mus_musculus
ENSIPUG00000018661	c1d	94	60.870	MGP_PahariEiJ_G0016781	C1d	100	63.559	Mus_pahari
ENSIPUG00000018661	c1d	87	62.698	MGP_SPRETEiJ_G0016952	C1d	100	62.712	Mus_spretus
ENSIPUG00000018661	c1d	92	61.654	ENSMPUG00000006224	C1D	92	61.654	Mustela_putorius_furo
ENSIPUG00000018661	c1d	97	61.151	ENSMLUG00000010791	-	96	61.151	Myotis_lucifugus
ENSIPUG00000018661	c1d	97	60.432	ENSMLUG00000024947	-	96	60.432	Myotis_lucifugus
ENSIPUG00000018661	c1d	92	61.364	ENSMLUG00000029990	-	96	59.712	Myotis_lucifugus
ENSIPUG00000018661	c1d	85	60.163	ENSNGAG00000011872	-	87	60.163	Nannospalax_galili
ENSIPUG00000018661	c1d	74	57.009	ENSNGAG00000012482	-	85	57.009	Nannospalax_galili
ENSIPUG00000018661	c1d	85	57.377	ENSNGAG00000016675	-	87	57.377	Nannospalax_galili
ENSIPUG00000018661	c1d	80	68.966	ENSNBRG00000010704	c1d	86	65.891	Neolamprologus_brichardi
ENSIPUG00000018661	c1d	92	60.902	ENSNLEG00000032919	-	72	60.902	Nomascus_leucogenys
ENSIPUG00000018661	c1d	92	60.150	ENSOPRG00000009586	C1D	92	60.150	Ochotona_princeps
ENSIPUG00000018661	c1d	92	60.902	ENSODEG00000011242	-	92	60.902	Octodon_degus
ENSIPUG00000018661	c1d	92	60.902	ENSODEG00000018885	-	94	60.902	Octodon_degus
ENSIPUG00000018661	c1d	92	53.383	ENSODEG00000018525	-	92	53.383	Octodon_degus
ENSIPUG00000018661	c1d	85	69.106	ENSONIG00000001233	c1d	89	66.176	Oreochromis_niloticus
ENSIPUG00000018661	c1d	64	72.043	ENSOANG00000008385	C1D	86	70.833	Ornithorhynchus_anatinus
ENSIPUG00000018661	c1d	92	60.902	ENSOCUG00000009771	-	96	59.712	Oryctolagus_cuniculus
ENSIPUG00000018661	c1d	92	60.902	ENSOCUG00000025587	-	96	59.712	Oryctolagus_cuniculus
ENSIPUG00000018661	c1d	94	61.481	ENSORLG00000021968	c1d	84	61.481	Oryzias_latipes
ENSIPUG00000018661	c1d	94	61.481	ENSORLG00020000507	c1d	85	61.481	Oryzias_latipes_hni
ENSIPUG00000018661	c1d	94	61.481	ENSORLG00015004594	c1d	83	61.481	Oryzias_latipes_hsok
ENSIPUG00000018661	c1d	99	55.629	ENSOMEG00000004672	c1d	97	55.629	Oryzias_melastigma
ENSIPUG00000018661	c1d	100	56.944	ENSOGAG00000027934	-	100	56.944	Otolemur_garnettii
ENSIPUG00000018661	c1d	92	60.902	ENSOARG00000019931	C1D	92	60.902	Ovis_aries
ENSIPUG00000018661	c1d	92	57.143	ENSPPAG00000040091	-	74	57.143	Pan_paniscus
ENSIPUG00000018661	c1d	92	60.902	ENSPPAG00000037847	-	92	60.902	Pan_paniscus
ENSIPUG00000018661	c1d	92	60.902	ENSPPRG00000017045	-	92	60.902	Panthera_pardus
ENSIPUG00000018661	c1d	92	45.455	ENSPPRG00000022830	-	90	44.697	Panthera_pardus
ENSIPUG00000018661	c1d	92	60.902	ENSPTIG00000009414	C1D	92	60.902	Panthera_tigris_altaica
ENSIPUG00000018661	c1d	92	60.902	ENSPTRG00000023558	C1D	92	60.902	Pan_troglodytes
ENSIPUG00000018661	c1d	92	59.398	ENSPANG00000000501	-	92	59.398	Papio_anubis
ENSIPUG00000018661	c1d	92	60.150	ENSPANG00000002886	C1D	72	60.150	Papio_anubis
ENSIPUG00000018661	c1d	99	62.500	ENSPKIG00000004877	c1d	97	62.500	Paramormyrops_kingsleyae
ENSIPUG00000018661	c1d	99	58.621	ENSPSIG00000010015	C1D	100	58.621	Pelodiscus_sinensis
ENSIPUG00000018661	c1d	85	71.545	ENSPMGG00000009326	c1d	79	71.545	Periophthalmus_magnuspinnatus
ENSIPUG00000018661	c1d	94	57.353	ENSPCIG00000006831	-	94	57.353	Phascolarctos_cinereus
ENSIPUG00000018661	c1d	94	62.774	ENSPCIG00000018629	-	96	62.774	Phascolarctos_cinereus
ENSIPUG00000018661	c1d	99	63.380	ENSPFOG00000003686	c1d	89	63.380	Poecilia_formosa
ENSIPUG00000018661	c1d	98	64.539	ENSPLAG00000000228	c1d	97	63.380	Poecilia_latipinna
ENSIPUG00000018661	c1d	99	63.380	ENSPMEG00000023213	c1d	89	63.380	Poecilia_mexicana
ENSIPUG00000018661	c1d	95	64.964	ENSPREG00000000742	c1d	96	64.964	Poecilia_reticulata
ENSIPUG00000018661	c1d	92	59.398	ENSPPYG00000002294	-	92	59.398	Pongo_abelii
ENSIPUG00000018661	c1d	92	60.902	ENSPPYG00000012354	C1D	71	60.902	Pongo_abelii
ENSIPUG00000018661	c1d	92	51.880	ENSPCAG00000010088	C1D	73	51.880	Procavia_capensis
ENSIPUG00000018661	c1d	100	57.639	ENSPCOG00000016112	C1D	100	57.639	Propithecus_coquereli
ENSIPUG00000018661	c1d	87	62.698	ENSPVAG00000012692	C1D	69	63.415	Pteropus_vampyrus
ENSIPUG00000018661	c1d	85	67.200	ENSPNYG00000008789	c1d	89	64.493	Pundamilia_nyererei
ENSIPUG00000018661	c1d	99	75.177	ENSPNAG00000004219	c1d	97	75.177	Pygocentrus_nattereri
ENSIPUG00000018661	c1d	92	60.902	ENSRNOG00000005982	C1d	92	60.902	Rattus_norvegicus
ENSIPUG00000018661	c1d	92	59.398	ENSRBIG00000026211	-	92	59.398	Rhinopithecus_bieti
ENSIPUG00000018661	c1d	87	61.111	ENSRROG00000005944	-	89	61.111	Rhinopithecus_roxellana
ENSIPUG00000018661	c1d	92	60.150	ENSRROG00000029013	C1D	92	60.150	Rhinopithecus_roxellana
ENSIPUG00000018661	c1d	92	60.902	ENSSBOG00000025275	C1D	92	60.902	Saimiri_boliviensis_boliviensis
ENSIPUG00000018661	c1d	94	62.044	ENSSHAG00000008352	C1D	66	62.044	Sarcophilus_harrisii
ENSIPUG00000018661	c1d	85	66.393	ENSSFOG00015010861	c1d	87	66.393	Scleropages_formosus
ENSIPUG00000018661	c1d	86	66.667	ENSSMAG00000019230	c1d	81	66.667	Scophthalmus_maximus
ENSIPUG00000018661	c1d	100	63.194	ENSSDUG00000020213	c1d	91	63.194	Seriola_dumerili
ENSIPUG00000018661	c1d	100	63.889	ENSSLDG00000017371	c1d	88	63.889	Seriola_lalandi_dorsalis
ENSIPUG00000018661	c1d	83	63.866	ENSSPUG00000006525	C1D	87	60.606	Sphenodon_punctatus
ENSIPUG00000018661	c1d	88	66.929	ENSSPAG00000008574	c1d	86	65.441	Stegastes_partitus
ENSIPUG00000018661	c1d	92	60.150	ENSSSCG00000039331	-	92	60.150	Sus_scrofa
ENSIPUG00000018661	c1d	79	50.877	ENSSSCG00000035701	-	95	50.877	Sus_scrofa
ENSIPUG00000018661	c1d	84	63.636	ENSTGUG00000002367	C1D	84	63.636	Taeniopygia_guttata
ENSIPUG00000018661	c1d	80	68.966	ENSTRUG00000012245	c1d	70	68.966	Takifugu_rubripes
ENSIPUG00000018661	c1d	94	62.500	ENSTNIG00000009827	c1d	90	62.500	Tetraodon_nigroviridis
ENSIPUG00000018661	c1d	100	58.333	ENSTBEG00000009797	C1D	100	58.333	Tupaia_belangeri
ENSIPUG00000018661	c1d	92	60.902	ENSTTRG00000013982	C1D	75	60.902	Tursiops_truncatus
ENSIPUG00000018661	c1d	92	50.735	ENSUAMG00000025246	C1D	92	50.735	Ursus_americanus
ENSIPUG00000018661	c1d	92	60.902	ENSUMAG00000021118	-	92	60.902	Ursus_maritimus
ENSIPUG00000018661	c1d	71	50.980	ENSUMAG00000006451	-	91	50.450	Ursus_maritimus
ENSIPUG00000018661	c1d	92	60.150	ENSVPAG00000012080	C1D	73	60.150	Vicugna_pacos
ENSIPUG00000018661	c1d	92	62.406	ENSVVUG00000027629	C1D	81	62.406	Vulpes_vulpes
ENSIPUG00000018661	c1d	85	60.976	ENSXETG00000025934	c1d	85	60.976	Xenopus_tropicalis
ENSIPUG00000018661	c1d	80	71.552	ENSXCOG00000013813	c1d	84	66.667	Xiphophorus_couchianus
ENSIPUG00000018661	c1d	80	70.690	ENSXMAG00000022273	c1d	84	65.891	Xiphophorus_maculatus