EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000018681 (Gene tree)
Gene ID: 108272121
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 59127 bases
Position: chr11:15210144-15269270
Accession: 108272121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000027655	SAP	PF02037.27	4.4e-08	1	1
ENSIPUP00000027667	SAP	PF02037.27	4.5e-08	1	1
ENSIPUP00000027622	SAP	PF02037.27	4.6e-08	1	1
ENSIPUP00000027646	SAP	PF02037.27	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000028792	-	1557	-	ENSIPUP00000027667	443 (aa)	-	-
ENSIPUT00000028771	-	2001	XM_017480316	ENSIPUP00000027646	454 (aa)	XP_017335805	A0A2D0S0R9
ENSIPUT00000028746	-	2048	XM_017480317	ENSIPUP00000027622	448 (aa)	XP_017335806	A0A2D0S043
ENSIPUT00000028781	-	1956	XM_017480319	ENSIPUP00000027655	439 (aa)	XP_017335808	A0A2D0RZ80

Gene Model

Click here to download ENSIPUG00000018681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018681	rad18	83	42.520	ENSG00000070950	RAD18	100	53.846	Homo_sapiens
ENSIPUG00000018681	rad18	99	52.155	ENSAPOG00000005260	rad18	92	52.155	Acanthochromis_polyacanthus
ENSIPUG00000018681	rad18	82	41.710	ENSAMEG00000012375	RAD18	63	43.548	Ailuropoda_melanoleuca
ENSIPUG00000018681	rad18	80	48.571	ENSACIG00000020655	rad18	88	50.269	Amphilophus_citrinellus
ENSIPUG00000018681	rad18	96	52.308	ENSAOCG00000004507	rad18	95	52.891	Amphiprion_ocellaris
ENSIPUG00000018681	rad18	96	52.088	ENSAPEG00000016837	rad18	100	53.275	Amphiprion_percula
ENSIPUG00000018681	rad18	81	42.204	ENSAPLG00000003138	RAD18	75	43.855	Anas_platyrhynchos
ENSIPUG00000018681	rad18	83	42.216	ENSANAG00000033360	RAD18	72	44.110	Aotus_nancymaae
ENSIPUG00000018681	rad18	99	50.644	ENSACLG00000023506	rad18	99	52.203	Astatotilapia_calliptera
ENSIPUG00000018681	rad18	100	70.510	ENSAMXG00000002534	rad18	100	70.510	Astyanax_mexicanus
ENSIPUG00000018681	rad18	92	39.336	ENSBTAG00000012142	RAD18	88	40.931	Bos_taurus
ENSIPUG00000018681	rad18	99	40.397	ENSCJAG00000040303	RAD18	92	40.308	Callithrix_jacchus
ENSIPUG00000018681	rad18	87	42.537	ENSCAFG00000005548	RAD18	75	44.330	Canis_familiaris
ENSIPUG00000018681	rad18	87	42.537	ENSCAFG00020009228	RAD18	75	44.330	Canis_lupus_dingo
ENSIPUG00000018681	rad18	92	39.716	ENSCHIG00000007965	RAD18	95	44.218	Capra_hircus
ENSIPUG00000018681	rad18	79	39.011	ENSTSYG00000012189	RAD18	68	42.286	Carlito_syrichta
ENSIPUG00000018681	rad18	79	40.220	ENSCAPG00000000356	RAD18	97	36.281	Cavia_aperea
ENSIPUG00000018681	rad18	82	43.351	ENSCPOG00000013890	RAD18	71	45.028	Cavia_porcellus
ENSIPUG00000018681	rad18	83	42.216	ENSCCAG00000022920	RAD18	72	44.110	Cebus_capucinus
ENSIPUG00000018681	rad18	83	42.408	ENSCATG00000039277	RAD18	74	44.293	Cercocebus_atys
ENSIPUG00000018681	rad18	84	43.490	ENSCLAG00000003652	RAD18	73	45.135	Chinchilla_lanigera
ENSIPUG00000018681	rad18	83	42.159	ENSCSAG00000010783	RAD18	71	44.837	Chlorocebus_sabaeus
ENSIPUG00000018681	rad18	97	40.848	ENSCPBG00000014787	RAD18	93	42.534	Chrysemys_picta_bellii
ENSIPUG00000018681	rad18	83	43.194	ENSCANG00000007308	RAD18	72	45.109	Colobus_angolensis_palliatus
ENSIPUG00000018681	rad18	84	40.365	ENSCGRG00001010209	-	73	42.162	Cricetulus_griseus_chok1gshd
ENSIPUG00000018681	rad18	82	42.400	ENSCGRG00001018154	-	78	43.575	Cricetulus_griseus_chok1gshd
ENSIPUG00000018681	rad18	84	40.625	ENSCGRG00000019636	-	74	42.246	Cricetulus_griseus_crigri
ENSIPUG00000018681	rad18	82	42.400	ENSCGRG00000007283	-	78	43.575	Cricetulus_griseus_crigri
ENSIPUG00000018681	rad18	100	52.110	ENSCSEG00000002516	rad18	94	53.828	Cynoglossus_semilaevis
ENSIPUG00000018681	rad18	99	60.802	ENSDARG00000027938	rad18	98	62.763	Danio_rerio
ENSIPUG00000018681	rad18	83	40.992	ENSDNOG00000040055	RAD18	71	42.818	Dasypus_novemcinctus
ENSIPUG00000018681	rad18	90	38.889	ENSDORG00000001099	Rad18	82	40.750	Dipodomys_ordii
ENSIPUG00000018681	rad18	69	36.923	ENSETEG00000002268	RAD18	66	38.264	Echinops_telfairi
ENSIPUG00000018681	rad18	99	38.925	ENSEASG00005013316	RAD18	67	44.414	Equus_asinus_asinus
ENSIPUG00000018681	rad18	99	39.570	ENSECAG00000010746	RAD18	70	44.414	Equus_caballus
ENSIPUG00000018681	rad18	73	39.394	ENSEEUG00000000236	-	70	41.270	Erinaceus_europaeus
ENSIPUG00000018681	rad18	88	52.214	ENSELUG00000000733	rad18	84	53.606	Esox_lucius
ENSIPUG00000018681	rad18	83	42.377	ENSFCAG00000025747	RAD18	71	44.236	Felis_catus
ENSIPUG00000018681	rad18	94	40.141	ENSFALG00000013625	RAD18	91	40.141	Ficedula_albicollis
ENSIPUG00000018681	rad18	82	43.386	ENSFDAG00000009907	RAD18	71	45.055	Fukomys_damarensis
ENSIPUG00000018681	rad18	86	41.206	ENSGALG00000008368	RAD18	78	42.969	Gallus_gallus
ENSIPUG00000018681	rad18	86	57.990	ENSGACG00000000920	rad18	84	59.733	Gasterosteus_aculeatus
ENSIPUG00000018681	rad18	78	42.897	ENSGAGG00000005184	RAD18	88	41.766	Gopherus_agassizii
ENSIPUG00000018681	rad18	83	42.782	ENSGGOG00000008391	RAD18	72	44.687	Gorilla_gorilla
ENSIPUG00000018681	rad18	97	48.478	ENSHBUG00000013322	rad18	100	48.478	Haplochromis_burtoni
ENSIPUG00000018681	rad18	70	42.056	ENSHGLG00000009196	-	96	43.974	Heterocephalus_glaber_female
ENSIPUG00000018681	rad18	70	42.056	ENSHGLG00100017675	-	96	43.974	Heterocephalus_glaber_male
ENSIPUG00000018681	rad18	70	41.956	ENSSTOG00000004870	-	95	43.894	Ictidomys_tridecemlineatus
ENSIPUG00000018681	rad18	83	42.037	ENSJJAG00000001484	Rad18	79	43.631	Jaculus_jaculus
ENSIPUG00000018681	rad18	94	54.253	ENSKMAG00000020725	rad18	89	54.810	Kryptolebias_marmoratus
ENSIPUG00000018681	rad18	69	40.125	ENSLACG00000018437	RAD18	97	42.295	Latimeria_chalumnae
ENSIPUG00000018681	rad18	86	52.208	ENSLOCG00000010629	rad18	97	50.926	Lepisosteus_oculatus
ENSIPUG00000018681	rad18	83	41.053	ENSLAFG00000004667	RAD18	74	42.896	Loxodonta_africana
ENSIPUG00000018681	rad18	83	42.932	ENSMFAG00000028864	RAD18	72	44.837	Macaca_fascicularis
ENSIPUG00000018681	rad18	83	42.670	ENSMMUG00000020013	RAD18	97	43.590	Macaca_mulatta
ENSIPUG00000018681	rad18	83	42.670	ENSMNEG00000013464	RAD18	72	44.565	Macaca_nemestrina
ENSIPUG00000018681	rad18	83	42.408	ENSMLEG00000014306	RAD18	72	44.293	Mandrillus_leucophaeus
ENSIPUG00000018681	rad18	80	52.897	ENSMAMG00000023936	rad18	89	50.797	Mastacembelus_armatus
ENSIPUG00000018681	rad18	96	50.552	ENSMZEG00005010577	rad18	84	52.116	Maylandia_zebra
ENSIPUG00000018681	rad18	81	40.897	ENSMGAG00000010131	RAD18	75	42.740	Meleagris_gallopavo
ENSIPUG00000018681	rad18	89	38.861	ENSMAUG00000020642	Rad18	85	40.513	Mesocricetus_auratus
ENSIPUG00000018681	rad18	81	42.359	ENSMICG00000013536	RAD18	70	44.290	Microcebus_murinus
ENSIPUG00000018681	rad18	88	38.575	ENSMOCG00000009114	Rad18	78	42.466	Microtus_ochrogaster
ENSIPUG00000018681	rad18	80	53.403	ENSMMOG00000021793	rad18	97	55.556	Mola_mola
ENSIPUG00000018681	rad18	97	38.562	ENSMODG00000004679	RAD18	86	40.222	Monodelphis_domestica
ENSIPUG00000018681	rad18	89	39.855	MGP_CAROLIEiJ_G0028712	Rad18	97	44.194	Mus_caroli
ENSIPUG00000018681	rad18	84	40.470	ENSMUSG00000030254	Rad18	96	43.279	Mus_musculus
ENSIPUG00000018681	rad18	89	40.000	MGP_PahariEiJ_G0022463	Rad18	96	44.262	Mus_pahari
ENSIPUG00000018681	rad18	84	40.470	MGP_SPRETEiJ_G0029740	Rad18	96	43.279	Mus_spretus
ENSIPUG00000018681	rad18	99	39.570	ENSMPUG00000017063	RAD18	81	42.373	Mustela_putorius_furo
ENSIPUG00000018681	rad18	83	40.409	ENSMLUG00000016494	RAD18	71	43.767	Myotis_lucifugus
ENSIPUG00000018681	rad18	88	39.702	ENSNGAG00000012464	Rad18	88	41.388	Nannospalax_galili
ENSIPUG00000018681	rad18	80	49.211	ENSNBRG00000004794	rad18	97	51.233	Neolamprologus_brichardi
ENSIPUG00000018681	rad18	83	42.932	ENSNLEG00000003789	RAD18	72	44.837	Nomascus_leucogenys
ENSIPUG00000018681	rad18	60	40.714	ENSMEUG00000003444	-	61	43.233	Notamacropus_eugenii
ENSIPUG00000018681	rad18	82	40.464	ENSOPRG00000013856	RAD18	72	43.583	Ochotona_princeps
ENSIPUG00000018681	rad18	69	43.949	ENSODEG00000018158	RAD18	95	46.711	Octodon_degus
ENSIPUG00000018681	rad18	99	53.394	ENSONIG00000018979	rad18	98	55.116	Oreochromis_niloticus
ENSIPUG00000018681	rad18	99	39.177	ENSOCUG00000000013	RAD18	71	45.283	Oryctolagus_cuniculus
ENSIPUG00000018681	rad18	80	50.000	ENSORLG00000029026	rad18	96	51.475	Oryzias_latipes
ENSIPUG00000018681	rad18	83	40.360	ENSOGAG00000001410	RAD18	72	42.133	Otolemur_garnettii
ENSIPUG00000018681	rad18	83	41.207	ENSOARG00000007445	RAD18	71	43.052	Ovis_aries
ENSIPUG00000018681	rad18	83	42.520	ENSPPAG00000035797	RAD18	72	44.414	Pan_paniscus
ENSIPUG00000018681	rad18	88	41.320	ENSPPRG00000004021	RAD18	76	43.038	Panthera_pardus
ENSIPUG00000018681	rad18	88	41.320	ENSPTIG00000008602	RAD18	76	43.038	Panthera_tigris_altaica
ENSIPUG00000018681	rad18	83	42.520	ENSPTRG00000014583	RAD18	72	44.414	Pan_troglodytes
ENSIPUG00000018681	rad18	83	42.670	ENSPANG00000008855	RAD18	72	44.565	Papio_anubis
ENSIPUG00000018681	rad18	98	39.301	ENSPSIG00000006928	RAD18	88	40.929	Pelodiscus_sinensis
ENSIPUG00000018681	rad18	78	55.775	ENSPMGG00000013294	rad18	98	57.602	Periophthalmus_magnuspinnatus
ENSIPUG00000018681	rad18	99	39.019	ENSPEMG00000022129	Rad18	78	43.017	Peromyscus_maniculatus_bairdii
ENSIPUG00000018681	rad18	88	41.687	ENSPCIG00000024872	RAD18	82	43.445	Phascolarctos_cinereus
ENSIPUG00000018681	rad18	80	52.073	ENSPFOG00000002722	rad18	98	53.887	Poecilia_formosa
ENSIPUG00000018681	rad18	83	42.932	ENSPPYG00000013688	RAD18	72	44.837	Pongo_abelii
ENSIPUG00000018681	rad18	50	48.077	ENSPCAG00000008229	RAD18	50	47.170	Procavia_capensis
ENSIPUG00000018681	rad18	99	37.391	ENSPVAG00000012220	RAD18	73	43.956	Pteropus_vampyrus
ENSIPUG00000018681	rad18	96	50.993	ENSPNYG00000006815	rad18	90	52.561	Pundamilia_nyererei
ENSIPUG00000018681	rad18	100	73.333	ENSPNAG00000016082	rad18	100	73.333	Pygocentrus_nattereri
ENSIPUG00000018681	rad18	99	38.925	ENSRNOG00000005907	Rad18	74	43.432	Rattus_norvegicus
ENSIPUG00000018681	rad18	83	42.559	ENSRBIG00000044173	RAD18	72	44.444	Rhinopithecus_bieti
ENSIPUG00000018681	rad18	83	42.932	ENSRROG00000043948	RAD18	73	44.837	Rhinopithecus_roxellana
ENSIPUG00000018681	rad18	83	42.216	ENSSBOG00000008434	-	72	44.110	Saimiri_boliviensis_boliviensis
ENSIPUG00000018681	rad18	86	37.656	ENSSHAG00000012472	-	93	39.276	Sarcophilus_harrisii
ENSIPUG00000018681	rad18	86	57.632	ENSSFOG00015019264	rad18	94	53.982	Scleropages_formosus
ENSIPUG00000018681	rad18	69	45.570	ENSSPUG00000017486	RAD18	97	48.013	Sphenodon_punctatus
ENSIPUG00000018681	rad18	97	52.838	ENSSPAG00000007165	rad18	92	53.219	Stegastes_partitus
ENSIPUG00000018681	rad18	99	37.447	ENSSSCG00000026158	RAD18	81	40.334	Sus_scrofa
ENSIPUG00000018681	rad18	82	41.161	ENSTGUG00000010405	RAD18	80	42.740	Taeniopygia_guttata
ENSIPUG00000018681	rad18	80	53.495	ENSTRUG00000003517	rad18	100	55.153	Takifugu_rubripes
ENSIPUG00000018681	rad18	83	55.000	ENSTNIG00000014625	rad18	100	56.676	Tetraodon_nigroviridis
ENSIPUG00000018681	rad18	99	38.065	ENSTTRG00000005034	RAD18	82	40.241	Tursiops_truncatus
ENSIPUG00000018681	rad18	99	39.574	ENSUMAG00000019279	RAD18	81	42.243	Ursus_maritimus
ENSIPUG00000018681	rad18	83	39.578	ENSVPAG00000002063	RAD18	77	42.936	Vicugna_pacos
ENSIPUG00000018681	rad18	87	41.791	ENSVVUG00000025318	RAD18	78	43.557	Vulpes_vulpes
ENSIPUG00000018681	rad18	81	41.114	ENSXETG00000033878	RAD18	95	42.975	Xenopus_tropicalis
ENSIPUG00000018681	rad18	80	46.753	ENSXCOG00000020018	rad18	95	48.387	Xiphophorus_couchianus
ENSIPUG00000018681	rad18	80	47.532	ENSXMAG00000001516	rad18	95	48.925	Xiphophorus_maculatus