EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000018691 (Gene tree)
Gene ID: 108272317
Gene Symbol: polr3gla
Alias: sb:cb265|zgc:101594
Full Name: DNA-directed RNA polymerase III subunit RPC7-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8316 bases
Position: chr12:23658861-23667176
Accession: 108272317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000027592	RNA_pol_3_Rpc31	PF11705.8	1.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000028714	-	5188	XM_017480657	ENSIPUP00000027592	219 (aa)	XP_017336146	A0A2D0S128

Gene Model

Click here to download ENSIPUG00000018691's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG
ipu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000018691	polr3gla	100	57.014	ENSIPUG00000003803	polr3gl	94	57.692
ENSIPUG00000018691	polr3gla	98	45.205	ENSIPUG00000013820	polr3g	96	45.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018691	polr3gla	94	52.885	ENSAMXG00000001802	polr3glb	94	57.416	Astyanax_mexicanus
ENSIPUG00000018691	polr3gla	98	77.064	ENSAMXG00000031351	polr3gla	96	75.829	Astyanax_mexicanus
ENSIPUG00000018691	polr3gla	95	55.714	ENSCPBG00000007959	-	95	56.604	Chrysemys_picta_bellii
ENSIPUG00000018691	polr3gla	100	67.411	ENSDARG00000012044	polr3gla	95	70.616	Danio_rerio
ENSIPUG00000018691	polr3gla	97	53.953	ENSDARG00000013734	polr3glb	96	53.589	Danio_rerio
ENSIPUG00000018691	polr3gla	94	51.376	ENSELUG00000008311	polr3glb	95	52.941	Esox_lucius
ENSIPUG00000018691	polr3gla	94	63.158	ENSELUG00000013880	polr3gla	94	63.636	Esox_lucius
ENSIPUG00000018691	polr3gla	94	55.714	ENSLACG00000013217	-	94	54.762	Latimeria_chalumnae
ENSIPUG00000018691	polr3gla	94	58.294	ENSLOCG00000008195	polr3glb	94	58.768	Lepisosteus_oculatus
ENSIPUG00000018691	polr3gla	94	54.808	ENSPSIG00000010726	-	94	54.976	Pelodiscus_sinensis
ENSIPUG00000018691	polr3gla	94	52.404	ENSPNAG00000000732	polr3glb	94	56.938	Pygocentrus_nattereri