EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000018879 (Gene tree)
Gene ID: 108280456
Gene Symbol: si:dkey-10o6.2
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 11328 bases
Position: chr20:17021802-17033129
Accession: 108280456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000027890	2OG-FeII_Oxy	PF03171.20	1.6e-15	1	1
ENSIPUP00000027901	2OG-FeII_Oxy	PF03171.20	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029024	-	2566	XM_017495423	ENSIPUP00000027890	371 (aa)	XP_017350912	-
ENSIPUT00000029037	-	2095	XM_017495425	ENSIPUP00000027901	338 (aa)	XP_017350914	-

Gene Model

Click here to download ENSIPUG00000018879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000018879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000018879	si:dkey-10o6.2	91	98.706	ENSIPUG00000018911	-	100	99.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000018879	si:dkey-10o6.2	76	68.726	ENSAPOG00000011678	si:dkey-10o6.2	90	68.726	Acanthochromis_polyacanthus
ENSIPUG00000018879	si:dkey-10o6.2	91	65.161	ENSACIG00000011675	-	99	66.019	Amphilophus_citrinellus
ENSIPUG00000018879	si:dkey-10o6.2	88	66.667	ENSACIG00000024115	si:dkey-10o6.2	95	66.667	Amphilophus_citrinellus
ENSIPUG00000018879	si:dkey-10o6.2	91	66.124	ENSAOCG00000013068	si:dkey-10o6.2	99	66.452	Amphiprion_ocellaris
ENSIPUG00000018879	si:dkey-10o6.2	91	66.124	ENSAPEG00000011246	si:dkey-10o6.2	99	66.775	Amphiprion_percula
ENSIPUG00000018879	si:dkey-10o6.2	91	67.961	ENSATEG00000021945	si:dkey-10o6.2	99	68.608	Anabas_testudineus
ENSIPUG00000018879	si:dkey-10o6.2	91	67.961	ENSATEG00000000030	si:dkey-10o6.2	99	68.608	Anabas_testudineus
ENSIPUG00000018879	si:dkey-10o6.2	91	66.343	ENSATEG00000021952	si:dkey-10o6.2	99	66.990	Anabas_testudineus
ENSIPUG00000018879	si:dkey-10o6.2	91	64.401	ENSACLG00000023011	si:dkey-10o6.2	99	65.049	Astatotilapia_calliptera
ENSIPUG00000018879	si:dkey-10o6.2	91	65.696	ENSAMXG00000021555	si:dkey-10o6.2	100	66.026	Astyanax_mexicanus
ENSIPUG00000018879	si:dkey-10o6.2	86	38.762	ENSCING00000016920	-	94	38.344	Ciona_intestinalis
ENSIPUG00000018879	si:dkey-10o6.2	80	36.331	ENSCING00000022311	-	88	36.332	Ciona_intestinalis
ENSIPUG00000018879	si:dkey-10o6.2	70	38.589	ENSCING00000011926	-	100	39.095	Ciona_intestinalis
ENSIPUG00000018879	si:dkey-10o6.2	88	32.686	ENSCING00000012500	-	98	32.812	Ciona_intestinalis
ENSIPUG00000018879	si:dkey-10o6.2	82	39.298	ENSCING00000007255	-	87	39.863	Ciona_intestinalis
ENSIPUG00000018879	si:dkey-10o6.2	71	33.740	ENSCSAVG00000001337	-	99	34.008	Ciona_savignyi
ENSIPUG00000018879	si:dkey-10o6.2	83	31.597	ENSCSAVG00000000201	-	87	32.180	Ciona_savignyi
ENSIPUG00000018879	si:dkey-10o6.2	77	38.806	ENSCSAVG00000004616	-	88	38.721	Ciona_savignyi
ENSIPUG00000018879	si:dkey-10o6.2	91	59.091	ENSCSEG00000000918	si:dkey-10o6.2	98	59.740	Cynoglossus_semilaevis
ENSIPUG00000018879	si:dkey-10o6.2	91	60.518	ENSCSEG00000000927	si:dkey-10o6.2	99	61.165	Cynoglossus_semilaevis
ENSIPUG00000018879	si:dkey-10o6.2	91	65.260	ENSCVAG00000015074	si:dkey-10o6.2	99	65.909	Cyprinodon_variegatus
ENSIPUG00000018879	si:dkey-10o6.2	93	68.025	ENSDARG00000074628	si:dkey-10o6.2	91	68.025	Danio_rerio
ENSIPUG00000018879	si:dkey-10o6.2	78	32.463	FBgn0053093	CG33093	86	31.142	Drosophila_melanogaster
ENSIPUG00000018879	si:dkey-10o6.2	86	30.592	FBgn0053099	CG33099	90	30.592	Drosophila_melanogaster
ENSIPUG00000018879	si:dkey-10o6.2	91	67.314	ENSELUG00000003488	si:dkey-10o6.2	99	67.742	Esox_lucius
ENSIPUG00000018879	si:dkey-10o6.2	91	62.783	ENSFHEG00000019035	si:dkey-10o6.2	99	63.430	Fundulus_heteroclitus
ENSIPUG00000018879	si:dkey-10o6.2	89	62.458	ENSGMOG00000018989	si:dkey-10o6.2	99	63.123	Gadus_morhua
ENSIPUG00000018879	si:dkey-10o6.2	91	64.078	ENSGAFG00000006137	si:dkey-10o6.2	99	64.516	Gambusia_affinis
ENSIPUG00000018879	si:dkey-10o6.2	91	59.627	ENSGACG00000006806	si:dkey-10o6.2	99	60.248	Gasterosteus_aculeatus
ENSIPUG00000018879	si:dkey-10o6.2	91	64.725	ENSHBUG00000008853	si:dkey-10o6.2	99	65.372	Haplochromis_burtoni
ENSIPUG00000018879	si:dkey-10o6.2	91	62.581	ENSHCOG00000017626	si:dkey-10o6.2	99	63.226	Hippocampus_comes
ENSIPUG00000018879	si:dkey-10o6.2	91	60.772	ENSHCOG00000017671	-	99	61.290	Hippocampus_comes
ENSIPUG00000018879	si:dkey-10o6.2	91	59.032	ENSKMAG00000006197	si:dkey-10o6.2	99	59.677	Kryptolebias_marmoratus
ENSIPUG00000018879	si:dkey-10o6.2	91	60.784	ENSLBEG00000003839	si:dkey-10o6.2	99	61.111	Labrus_bergylta
ENSIPUG00000018879	si:dkey-10o6.2	95	59.347	ENSLBEG00000003823	si:dkey-10o6.2	98	59.347	Labrus_bergylta
ENSIPUG00000018879	si:dkey-10o6.2	87	64.407	ENSMAMG00000023022	si:dkey-10o6.2	99	63.226	Mastacembelus_armatus
ENSIPUG00000018879	si:dkey-10o6.2	91	62.581	ENSMAMG00000023020	si:dkey-10o6.2	99	63.226	Mastacembelus_armatus
ENSIPUG00000018879	si:dkey-10o6.2	91	61.613	ENSMAMG00000023026	-	99	62.258	Mastacembelus_armatus
ENSIPUG00000018879	si:dkey-10o6.2	91	61.290	ENSMAMG00000023025	-	99	61.935	Mastacembelus_armatus
ENSIPUG00000018879	si:dkey-10o6.2	91	64.078	ENSMZEG00005012018	si:dkey-10o6.2	99	64.725	Maylandia_zebra
ENSIPUG00000018879	si:dkey-10o6.2	90	60.000	ENSMMOG00000020383	si:dkey-10o6.2	96	60.645	Mola_mola
ENSIPUG00000018879	si:dkey-10o6.2	91	63.871	ENSMALG00000011300	si:dkey-10o6.2	99	64.516	Monopterus_albus
ENSIPUG00000018879	si:dkey-10o6.2	91	59.223	ENSNBRG00000015840	si:dkey-10o6.2	99	59.871	Neolamprologus_brichardi
ENSIPUG00000018879	si:dkey-10o6.2	91	64.725	ENSONIG00000015572	si:dkey-10o6.2	99	65.372	Oreochromis_niloticus
ENSIPUG00000018879	si:dkey-10o6.2	91	55.340	ENSORLG00000001314	si:dkey-10o6.2	99	55.987	Oryzias_latipes
ENSIPUG00000018879	si:dkey-10o6.2	91	55.663	ENSORLG00020002660	si:dkey-10o6.2	99	56.311	Oryzias_latipes_hni
ENSIPUG00000018879	si:dkey-10o6.2	91	58.576	ENSOMEG00000003617	si:dkey-10o6.2	96	59.223	Oryzias_melastigma
ENSIPUG00000018879	si:dkey-10o6.2	91	63.754	ENSPKIG00000024109	-	98	66.537	Paramormyrops_kingsleyae
ENSIPUG00000018879	si:dkey-10o6.2	91	64.286	ENSPKIG00000004183	si:dkey-10o6.2	86	65.472	Paramormyrops_kingsleyae
ENSIPUG00000018879	si:dkey-10o6.2	91	65.472	ENSPKIG00000004206	si:dkey-10o6.2	79	66.124	Paramormyrops_kingsleyae
ENSIPUG00000018879	si:dkey-10o6.2	91	54.859	ENSPMGG00000021603	si:dkey-10o6.2	100	55.280	Periophthalmus_magnuspinnatus
ENSIPUG00000018879	si:dkey-10o6.2	91	64.169	ENSPFOG00000017244	si:dkey-10o6.2	97	64.401	Poecilia_formosa
ENSIPUG00000018879	si:dkey-10o6.2	91	64.194	ENSPLAG00000008037	si:dkey-10o6.2	100	64.630	Poecilia_latipinna
ENSIPUG00000018879	si:dkey-10o6.2	65	70.000	ENSPMEG00000020748	si:dkey-10o6.2	97	70.000	Poecilia_mexicana
ENSIPUG00000018879	si:dkey-10o6.2	91	61.165	ENSPREG00000005108	si:dkey-10o6.2	99	61.613	Poecilia_reticulata
ENSIPUG00000018879	si:dkey-10o6.2	91	64.401	ENSPNYG00000010698	si:dkey-10o6.2	99	65.049	Pundamilia_nyererei
ENSIPUG00000018879	si:dkey-10o6.2	75	68.110	ENSPNAG00000014485	-	79	66.794	Pygocentrus_nattereri
ENSIPUG00000018879	si:dkey-10o6.2	91	67.742	ENSPNAG00000014123	si:dkey-10o6.2	97	68.065	Pygocentrus_nattereri
ENSIPUG00000018879	si:dkey-10o6.2	89	64.570	ENSSFOG00015015345	si:dkey-10o6.2	98	64.570	Scleropages_formosus
ENSIPUG00000018879	si:dkey-10o6.2	91	64.935	ENSSMAG00000019016	si:dkey-10o6.2	99	65.584	Scophthalmus_maximus
ENSIPUG00000018879	si:dkey-10o6.2	91	67.638	ENSSDUG00000000943	si:dkey-10o6.2	99	68.285	Seriola_dumerili
ENSIPUG00000018879	si:dkey-10o6.2	91	67.314	ENSSLDG00000003462	si:dkey-10o6.2	99	67.961	Seriola_lalandi_dorsalis
ENSIPUG00000018879	si:dkey-10o6.2	91	65.472	ENSSPAG00000020962	si:dkey-10o6.2	98	66.124	Stegastes_partitus
ENSIPUG00000018879	si:dkey-10o6.2	90	58.553	ENSTRUG00000019532	si:dkey-10o6.2	99	58.632	Takifugu_rubripes
ENSIPUG00000018879	si:dkey-10o6.2	90	62.541	ENSXCOG00000000855	si:dkey-10o6.2	99	62.379	Xiphophorus_couchianus
ENSIPUG00000018879	si:dkey-10o6.2	90	63.725	ENSXMAG00000012432	si:dkey-10o6.2	99	63.754	Xiphophorus_maculatus