EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019071 (Gene tree)
Gene ID: 108280920
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8860 bases
Position: chr20:17137314-17146173
Accession: 108280920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028158	zf-met	PF12874.7	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029301	-	5619	XM_017496429	ENSIPUP00000028158	299 (aa)	XP_017351918	A0A2D0TAL2

Gene Model

Click here to download ENSIPUG00000019071's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019071	sf3a2	72	95.370	ENSG00000104897	SF3A2	100	96.296	Homo_sapiens
ENSIPUG00000019071	sf3a2	81	92.593	ENSAPOG00000003916	sf3a2	82	92.593	Acanthochromis_polyacanthus
ENSIPUG00000019071	sf3a2	72	95.370	ENSAMEG00000005469	SF3A2	53	89.754	Ailuropoda_melanoleuca
ENSIPUG00000019071	sf3a2	80	93.305	ENSACIG00000018153	sf3a2	81	93.305	Amphilophus_citrinellus
ENSIPUG00000019071	sf3a2	81	92.181	ENSAOCG00000015960	sf3a2	82	92.181	Amphiprion_ocellaris
ENSIPUG00000019071	sf3a2	81	92.181	ENSAPEG00000012336	sf3a2	82	92.181	Amphiprion_percula
ENSIPUG00000019071	sf3a2	81	92.593	ENSATEG00000015449	sf3a2	82	92.593	Anabas_testudineus
ENSIPUG00000019071	sf3a2	62	95.135	ENSANAG00000034031	-	89	95.135	Aotus_nancymaae
ENSIPUG00000019071	sf3a2	86	89.883	ENSACLG00000002356	sf3a2	81	92.887	Astatotilapia_calliptera
ENSIPUG00000019071	sf3a2	100	88.742	ENSAMXG00000032428	sf3a2	100	89.073	Astyanax_mexicanus
ENSIPUG00000019071	sf3a2	72	95.370	ENSBTAG00000025452	SF3A2	51	89.754	Bos_taurus
ENSIPUG00000019071	sf3a2	74	79.186	WBGene00008683	repo-1	99	79.186	Caenorhabditis_elegans
ENSIPUG00000019071	sf3a2	72	95.370	ENSCJAG00000013206	-	53	89.754	Callithrix_jacchus
ENSIPUG00000019071	sf3a2	72	95.370	ENSCAFG00000019414	SF3A2	51	89.754	Canis_familiaris
ENSIPUG00000019071	sf3a2	72	95.370	ENSCAFG00020018153	SF3A2	51	89.754	Canis_lupus_dingo
ENSIPUG00000019071	sf3a2	72	95.370	ENSCHIG00000018323	SF3A2	51	89.754	Capra_hircus
ENSIPUG00000019071	sf3a2	61	96.154	ENSCAPG00000003402	-	90	96.154	Cavia_aperea
ENSIPUG00000019071	sf3a2	72	95.370	ENSCPOG00000032868	SF3A2	54	89.754	Cavia_porcellus
ENSIPUG00000019071	sf3a2	72	95.370	ENSCCAG00000009812	SF3A2	87	95.676	Cebus_capucinus
ENSIPUG00000019071	sf3a2	72	95.370	ENSCATG00000038453	SF3A2	53	89.754	Cercocebus_atys
ENSIPUG00000019071	sf3a2	72	95.370	ENSCLAG00000008987	SF3A2	54	89.754	Chinchilla_lanigera
ENSIPUG00000019071	sf3a2	72	95.370	ENSCSAG00000011717	SF3A2	52	89.754	Chlorocebus_sabaeus
ENSIPUG00000019071	sf3a2	72	95.370	ENSCPBG00000018569	SF3A2	78	88.710	Chrysemys_picta_bellii
ENSIPUG00000019071	sf3a2	80	79.079	ENSCING00000003319	zf(matrin)-2	64	79.412	Ciona_intestinalis
ENSIPUG00000019071	sf3a2	80	78.151	ENSCSAVG00000007862	-	64	78.243	Ciona_savignyi
ENSIPUG00000019071	sf3a2	72	95.370	ENSCANG00000024451	SF3A2	53	89.754	Colobus_angolensis_palliatus
ENSIPUG00000019071	sf3a2	72	95.370	ENSCGRG00001001802	Sf3a2	50	89.754	Cricetulus_griseus_chok1gshd
ENSIPUG00000019071	sf3a2	72	95.370	ENSCGRG00000011089	Sf3a2	94	96.154	Cricetulus_griseus_crigri
ENSIPUG00000019071	sf3a2	88	86.260	ENSCSEG00000014308	sf3a2	84	90.795	Cynoglossus_semilaevis
ENSIPUG00000019071	sf3a2	81	90.535	ENSCVAG00000021349	sf3a2	83	90.535	Cyprinodon_variegatus
ENSIPUG00000019071	sf3a2	81	92.181	ENSDARG00000021107	sf3a2	87	92.181	Danio_rerio
ENSIPUG00000019071	sf3a2	72	94.907	ENSDORG00000014445	Sf3a2	53	89.344	Dipodomys_ordii
ENSIPUG00000019071	sf3a2	72	84.259	FBgn0036314	Sf3a2	84	83.408	Drosophila_melanogaster
ENSIPUG00000019071	sf3a2	72	95.370	ENSEASG00005021972	SF3A2	53	89.754	Equus_asinus_asinus
ENSIPUG00000019071	sf3a2	81	92.946	ENSELUG00000008471	sf3a2	79	92.593	Esox_lucius
ENSIPUG00000019071	sf3a2	72	94.907	ENSFCAG00000030476	SF3A2	56	89.344	Felis_catus
ENSIPUG00000019071	sf3a2	63	96.257	ENSFALG00000013785	-	70	78.067	Ficedula_albicollis
ENSIPUG00000019071	sf3a2	61	96.154	ENSFDAG00000020911	-	93	96.154	Fukomys_damarensis
ENSIPUG00000019071	sf3a2	86	90.661	ENSFHEG00000002392	sf3a2	82	91.770	Fundulus_heteroclitus
ENSIPUG00000019071	sf3a2	81	92.531	ENSGMOG00000012186	sf3a2	81	92.181	Gadus_morhua
ENSIPUG00000019071	sf3a2	72	95.833	ENSGALG00000021679	SF3A2	78	89.796	Gallus_gallus
ENSIPUG00000019071	sf3a2	81	92.116	ENSGAFG00000008478	sf3a2	82	91.770	Gambusia_affinis
ENSIPUG00000019071	sf3a2	82	92.623	ENSGACG00000015255	sf3a2	83	92.593	Gasterosteus_aculeatus
ENSIPUG00000019071	sf3a2	57	95.882	ENSGAGG00000008500	SF3A2	74	87.624	Gopherus_agassizii
ENSIPUG00000019071	sf3a2	72	95.370	ENSGGOG00000006613	SF3A2	53	89.754	Gorilla_gorilla
ENSIPUG00000019071	sf3a2	86	89.883	ENSHBUG00000021796	sf3a2	81	92.887	Haplochromis_burtoni
ENSIPUG00000019071	sf3a2	72	95.370	ENSHGLG00000015102	SF3A2	88	96.175	Heterocephalus_glaber_female
ENSIPUG00000019071	sf3a2	72	95.370	ENSHGLG00100000418	SF3A2	88	96.175	Heterocephalus_glaber_male
ENSIPUG00000019071	sf3a2	87	88.973	ENSHCOG00000001223	sf3a2	82	92.887	Hippocampus_comes
ENSIPUG00000019071	sf3a2	72	95.370	ENSSTOG00000007495	SF3A2	90	88.525	Ictidomys_tridecemlineatus
ENSIPUG00000019071	sf3a2	72	95.370	ENSJJAG00000010635	Sf3a2	94	96.154	Jaculus_jaculus
ENSIPUG00000019071	sf3a2	83	88.353	ENSKMAG00000006295	sf3a2	82	90.083	Kryptolebias_marmoratus
ENSIPUG00000019071	sf3a2	86	91.440	ENSLBEG00000000677	sf3a2	82	92.593	Labrus_bergylta
ENSIPUG00000019071	sf3a2	72	96.296	ENSLACG00000008744	SF3A2	78	89.796	Latimeria_chalumnae
ENSIPUG00000019071	sf3a2	78	93.103	ENSLOCG00000005835	sf3a2	78	91.770	Lepisosteus_oculatus
ENSIPUG00000019071	sf3a2	72	95.370	ENSMFAG00000002638	SF3A2	53	89.754	Macaca_fascicularis
ENSIPUG00000019071	sf3a2	72	95.370	ENSMMUG00000010111	SF3A2	53	89.754	Macaca_mulatta
ENSIPUG00000019071	sf3a2	72	95.370	ENSMNEG00000036916	SF3A2	52	89.754	Macaca_nemestrina
ENSIPUG00000019071	sf3a2	81	91.770	ENSMAMG00000009881	sf3a2	82	91.770	Mastacembelus_armatus
ENSIPUG00000019071	sf3a2	86	89.883	ENSMZEG00005025609	sf3a2	81	92.887	Maylandia_zebra
ENSIPUG00000019071	sf3a2	72	95.833	ENSMGAG00000001950	SF3A2	78	89.796	Meleagris_gallopavo
ENSIPUG00000019071	sf3a2	61	96.154	ENSMAUG00000005644	-	94	96.154	Mesocricetus_auratus
ENSIPUG00000019071	sf3a2	72	95.370	ENSMICG00000015443	SF3A2	53	89.754	Microcebus_murinus
ENSIPUG00000019071	sf3a2	72	95.370	ENSMOCG00000007216	Sf3a2	53	89.754	Microtus_ochrogaster
ENSIPUG00000019071	sf3a2	91	77.778	ENSMMOG00000010657	sf3a2	86	84.298	Mola_mola
ENSIPUG00000019071	sf3a2	81	92.593	ENSMALG00000020442	sf3a2	82	92.593	Monopterus_albus
ENSIPUG00000019071	sf3a2	72	95.370	MGP_CAROLIEiJ_G0015602	-	94	96.154	Mus_caroli
ENSIPUG00000019071	sf3a2	72	95.370	ENSMUSG00000020211	Sf3a2	94	96.154	Mus_musculus
ENSIPUG00000019071	sf3a2	72	95.370	MGP_PahariEiJ_G0031015	-	94	96.154	Mus_pahari
ENSIPUG00000019071	sf3a2	72	95.370	MGP_SPRETEiJ_G0016420	-	94	96.154	Mus_spretus
ENSIPUG00000019071	sf3a2	72	94.907	ENSMLUG00000004426	-	55	89.344	Myotis_lucifugus
ENSIPUG00000019071	sf3a2	61	95.604	ENSNGAG00000023309	-	94	95.604	Nannospalax_galili
ENSIPUG00000019071	sf3a2	83	89.960	ENSNBRG00000019872	sf3a2	81	92.887	Neolamprologus_brichardi
ENSIPUG00000019071	sf3a2	63	94.118	ENSODEG00000013722	-	100	94.118	Octodon_degus
ENSIPUG00000019071	sf3a2	80	92.887	ENSONIG00000010198	sf3a2	81	92.887	Oreochromis_niloticus
ENSIPUG00000019071	sf3a2	69	94.146	ENSOANG00000013649	-	98	93.689	Ornithorhynchus_anatinus
ENSIPUG00000019071	sf3a2	89	87.266	ENSORLG00000015301	sf3a2	82	91.213	Oryzias_latipes
ENSIPUG00000019071	sf3a2	89	87.266	ENSORLG00020017235	sf3a2	82	91.213	Oryzias_latipes_hni
ENSIPUG00000019071	sf3a2	80	91.213	ENSORLG00015017116	sf3a2	82	91.213	Oryzias_latipes_hsok
ENSIPUG00000019071	sf3a2	80	91.213	ENSOMEG00000020860	sf3a2	82	91.213	Oryzias_melastigma
ENSIPUG00000019071	sf3a2	72	95.370	ENSOGAG00000033389	SF3A2	53	89.754	Otolemur_garnettii
ENSIPUG00000019071	sf3a2	72	95.370	ENSOARG00000014357	SF3A2	60	89.754	Ovis_aries
ENSIPUG00000019071	sf3a2	72	79.167	ENSPPAG00000037864	-	51	75.410	Pan_paniscus
ENSIPUG00000019071	sf3a2	72	94.907	ENSPPRG00000007798	SF3A2	52	89.344	Panthera_pardus
ENSIPUG00000019071	sf3a2	72	95.370	ENSPTRG00000010227	SF3A2	53	89.754	Pan_troglodytes
ENSIPUG00000019071	sf3a2	72	95.370	ENSPANG00000007949	SF3A2	53	89.754	Papio_anubis
ENSIPUG00000019071	sf3a2	81	93.416	ENSPKIG00000009487	sf3a2	97	84.641	Paramormyrops_kingsleyae
ENSIPUG00000019071	sf3a2	72	94.495	ENSPSIG00000010839	SF3A2	78	88.710	Pelodiscus_sinensis
ENSIPUG00000019071	sf3a2	72	95.833	ENSPMGG00000017249	sf3a2	80	95.146	Periophthalmus_magnuspinnatus
ENSIPUG00000019071	sf3a2	72	95.370	ENSPEMG00000021288	Sf3a2	53	89.754	Peromyscus_maniculatus_bairdii
ENSIPUG00000019071	sf3a2	81	92.181	ENSPFOG00000015945	sf3a2	83	92.181	Poecilia_formosa
ENSIPUG00000019071	sf3a2	81	91.770	ENSPLAG00000010052	sf3a2	83	91.770	Poecilia_latipinna
ENSIPUG00000019071	sf3a2	81	92.181	ENSPMEG00000000184	sf3a2	83	92.181	Poecilia_mexicana
ENSIPUG00000019071	sf3a2	81	91.770	ENSPREG00000017808	sf3a2	83	91.770	Poecilia_reticulata
ENSIPUG00000019071	sf3a2	72	95.370	ENSPPYG00000009342	SF3A2	53	89.754	Pongo_abelii
ENSIPUG00000019071	sf3a2	66	94.388	ENSPCAG00000014513	SF3A2	53	80.738	Procavia_capensis
ENSIPUG00000019071	sf3a2	72	95.370	ENSPCOG00000020295	SF3A2	54	89.754	Propithecus_coquereli
ENSIPUG00000019071	sf3a2	86	89.883	ENSPNYG00000006928	sf3a2	81	92.887	Pundamilia_nyererei
ENSIPUG00000019071	sf3a2	100	92.384	ENSPNAG00000027582	sf3a2	100	92.384	Pygocentrus_nattereri
ENSIPUG00000019071	sf3a2	72	94.907	ENSRNOG00000019349	Sf3a2	52	89.344	Rattus_norvegicus
ENSIPUG00000019071	sf3a2	72	95.370	ENSRBIG00000026709	SF3A2	54	89.754	Rhinopithecus_bieti
ENSIPUG00000019071	sf3a2	72	95.370	ENSRROG00000034440	SF3A2	52	89.754	Rhinopithecus_roxellana
ENSIPUG00000019071	sf3a2	72	94.907	ENSSHAG00000011677	-	99	89.344	Sarcophilus_harrisii
ENSIPUG00000019071	sf3a2	64	85.938	ENSSHAG00000011646	-	78	80.909	Sarcophilus_harrisii
ENSIPUG00000019071	sf3a2	86	92.248	ENSSFOG00015010920	sf3a2	69	93.827	Scleropages_formosus
ENSIPUG00000019071	sf3a2	83	90.726	ENSSMAG00000002629	sf3a2	83	92.887	Scophthalmus_maximus
ENSIPUG00000019071	sf3a2	83	91.566	ENSSDUG00000015810	sf3a2	83	93.004	Seriola_dumerili
ENSIPUG00000019071	sf3a2	83	91.968	ENSSLDG00000010874	sf3a2	83	93.416	Seriola_lalandi_dorsalis
ENSIPUG00000019071	sf3a2	81	93.004	ENSSPAG00000004960	sf3a2	82	93.004	Stegastes_partitus
ENSIPUG00000019071	sf3a2	72	94.907	ENSSSCG00000039757	SF3A2	53	89.344	Sus_scrofa
ENSIPUG00000019071	sf3a2	69	95.610	ENSTGUG00000000305	SF3A2	100	95.610	Taeniopygia_guttata
ENSIPUG00000019071	sf3a2	80	92.083	ENSTRUG00000009045	sf3a2	83	92.083	Takifugu_rubripes
ENSIPUG00000019071	sf3a2	80	91.250	ENSTNIG00000015318	sf3a2	83	91.250	Tetraodon_nigroviridis
ENSIPUG00000019071	sf3a2	72	78.241	ENSTTRG00000010177	-	53	74.590	Tursiops_truncatus
ENSIPUG00000019071	sf3a2	72	95.370	ENSVVUG00000002578	SF3A2	51	89.754	Vulpes_vulpes
ENSIPUG00000019071	sf3a2	81	89.754	ENSXETG00000024943	sf3a2	59	89.754	Xenopus_tropicalis
ENSIPUG00000019071	sf3a2	94	85.000	ENSXCOG00000008222	sf3a2	93	85.000	Xiphophorus_couchianus
ENSIPUG00000019071	sf3a2	94	85.000	ENSXMAG00000029068	sf3a2	93	85.000	Xiphophorus_maculatus