EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019105 (Gene tree)
Gene ID: 108279001
Gene Symbol: Larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 22745 bases
Position: chr18:9961015-9983759
Accession: 108279001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028240	La	PF05383.17	4.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029388	-	7122	XM_017492860	ENSIPUP00000028240	971 (aa)	XP_017348349	W5UC54

Gene Model

Click here to download ENSIPUG00000019105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019105	Larp1	95	52.298	ENSIPUG00000012138	larp1b	85	52.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019105	Larp1	90	66.631	ENSG00000155506	LARP1	97	71.212	Homo_sapiens
ENSIPUG00000019105	Larp1	83	90.385	ENSAPOG00000020685	larp1	98	90.385	Acanthochromis_polyacanthus
ENSIPUG00000019105	Larp1	90	66.917	ENSAMEG00000016673	LARP1	96	66.918	Ailuropoda_melanoleuca
ENSIPUG00000019105	Larp1	95	72.669	ENSACIG00000012994	larp1	87	72.454	Amphilophus_citrinellus
ENSIPUG00000019105	Larp1	81	79.177	ENSAOCG00000007792	larp1	98	77.482	Amphiprion_ocellaris
ENSIPUG00000019105	Larp1	100	73.397	ENSAPEG00000022246	larp1	98	72.440	Amphiprion_percula
ENSIPUG00000019105	Larp1	93	76.882	ENSATEG00000013523	larp1	88	76.080	Anabas_testudineus
ENSIPUG00000019105	Larp1	87	72.523	ENSAPLG00000007559	LARP1	99	70.495	Anas_platyrhynchos
ENSIPUG00000019105	Larp1	90	69.658	ENSACAG00000004071	LARP1	94	71.124	Anolis_carolinensis
ENSIPUG00000019105	Larp1	90	66.738	ENSANAG00000029949	LARP1	98	65.291	Aotus_nancymaae
ENSIPUG00000019105	Larp1	94	77.638	ENSACLG00000015256	larp1	96	74.632	Astatotilapia_calliptera
ENSIPUG00000019105	Larp1	98	77.866	ENSAMXG00000000859	larp1	98	75.930	Astyanax_mexicanus
ENSIPUG00000019105	Larp1	93	66.632	ENSBTAG00000008443	LARP1	88	65.881	Bos_taurus
ENSIPUG00000019105	Larp1	96	64.542	ENSCJAG00000004454	LARP1	91	66.136	Callithrix_jacchus
ENSIPUG00000019105	Larp1	90	66.702	ENSCAFG00000017639	LARP1	96	66.703	Canis_familiaris
ENSIPUG00000019105	Larp1	85	67.627	ENSCAFG00020023860	LARP1	96	67.630	Canis_lupus_dingo
ENSIPUG00000019105	Larp1	96	66.531	ENSCHIG00000014414	LARP1	98	61.459	Capra_hircus
ENSIPUG00000019105	Larp1	97	63.373	ENSTSYG00000013732	LARP1	97	66.304	Carlito_syrichta
ENSIPUG00000019105	Larp1	82	66.106	ENSCAPG00000013865	LARP1	84	65.983	Cavia_aperea
ENSIPUG00000019105	Larp1	90	66.738	ENSCPOG00000003377	LARP1	97	66.203	Cavia_porcellus
ENSIPUG00000019105	Larp1	96	64.126	ENSCCAG00000025201	LARP1	96	63.581	Cebus_capucinus
ENSIPUG00000019105	Larp1	93	65.902	ENSCATG00000030675	LARP1	90	66.846	Cercocebus_atys
ENSIPUG00000019105	Larp1	94	64.682	ENSCLAG00000012755	LARP1	98	65.751	Chinchilla_lanigera
ENSIPUG00000019105	Larp1	85	67.845	ENSCSAG00000010800	LARP1	97	66.628	Chlorocebus_sabaeus
ENSIPUG00000019105	Larp1	87	64.865	ENSCHOG00000012716	LARP1	89	64.865	Choloepus_hoffmanni
ENSIPUG00000019105	Larp1	93	71.197	ENSCPBG00000002173	LARP1	90	71.173	Chrysemys_picta_bellii
ENSIPUG00000019105	Larp1	90	67.060	ENSCANG00000037418	LARP1	90	66.954	Colobus_angolensis_palliatus
ENSIPUG00000019105	Larp1	93	66.251	ENSCGRG00001016913	Larp1	90	65.369	Cricetulus_griseus_chok1gshd
ENSIPUG00000019105	Larp1	90	64.885	ENSCGRG00000009916	Larp1	99	64.667	Cricetulus_griseus_crigri
ENSIPUG00000019105	Larp1	95	76.947	ENSCSEG00000016431	larp1	90	75.805	Cynoglossus_semilaevis
ENSIPUG00000019105	Larp1	96	77.113	ENSCVAG00000022687	larp1	97	73.403	Cyprinodon_variegatus
ENSIPUG00000019105	Larp1	99	72.653	ENSDARG00000101722	larp1	98	73.980	Danio_rerio
ENSIPUG00000019105	Larp1	96	63.817	ENSDNOG00000012073	LARP1	90	63.179	Dasypus_novemcinctus
ENSIPUG00000019105	Larp1	91	66.157	ENSDORG00000002897	Larp1	95	66.266	Dipodomys_ordii
ENSIPUG00000019105	Larp1	87	66.779	ENSETEG00000020251	LARP1	100	66.667	Echinops_telfairi
ENSIPUG00000019105	Larp1	93	66.460	ENSEASG00005001070	LARP1	87	66.147	Equus_asinus_asinus
ENSIPUG00000019105	Larp1	93	66.460	ENSECAG00000017002	LARP1	70	67.098	Equus_caballus
ENSIPUG00000019105	Larp1	88	64.602	ENSEEUG00000001065	LARP1	96	65.232	Erinaceus_europaeus
ENSIPUG00000019105	Larp1	99	71.214	ENSELUG00000019403	larp1	99	69.991	Esox_lucius
ENSIPUG00000019105	Larp1	93	66.598	ENSFCAG00000000592	LARP1	90	67.176	Felis_catus
ENSIPUG00000019105	Larp1	79	74.936	ENSFALG00000008335	LARP1	95	74.425	Ficedula_albicollis
ENSIPUG00000019105	Larp1	90	66.774	ENSFDAG00000021125	LARP1	97	66.239	Fukomys_damarensis
ENSIPUG00000019105	Larp1	57	74.597	ENSFHEG00000020307	larp1	92	73.313	Fundulus_heteroclitus
ENSIPUG00000019105	Larp1	98	71.354	ENSGALG00000040109	LARP1	96	71.354	Gallus_gallus
ENSIPUG00000019105	Larp1	98	66.341	ENSGAGG00000025113	LARP1	94	71.311	Gopherus_agassizii
ENSIPUG00000019105	Larp1	90	66.631	ENSGGOG00000006048	LARP1	91	66.030	Gorilla_gorilla
ENSIPUG00000019105	Larp1	94	78.361	ENSHBUG00000020762	larp1	96	75.344	Haplochromis_burtoni
ENSIPUG00000019105	Larp1	96	63.883	ENSHGLG00000006267	LARP1	92	62.757	Heterocephalus_glaber_female
ENSIPUG00000019105	Larp1	93	57.354	ENSHGLG00100003395	-	90	56.816	Heterocephalus_glaber_male
ENSIPUG00000019105	Larp1	92	65.543	ENSHGLG00100014230	-	98	65.433	Heterocephalus_glaber_male
ENSIPUG00000019105	Larp1	88	83.582	ENSHCOG00000010786	larp1	90	83.005	Hippocampus_comes
ENSIPUG00000019105	Larp1	90	67.253	ENSSTOG00000005678	LARP1	97	66.921	Ictidomys_tridecemlineatus
ENSIPUG00000019105	Larp1	98	59.577	ENSJJAG00000016950	Larp1	97	59.864	Jaculus_jaculus
ENSIPUG00000019105	Larp1	95	77.311	ENSKMAG00000018468	larp1	96	74.788	Kryptolebias_marmoratus
ENSIPUG00000019105	Larp1	96	73.895	ENSLBEG00000027172	larp1	92	72.533	Labrus_bergylta
ENSIPUG00000019105	Larp1	96	77.149	ENSLOCG00000012457	larp1	99	75.681	Lepisosteus_oculatus
ENSIPUG00000019105	Larp1	97	63.708	ENSLAFG00000008991	LARP1	91	63.708	Loxodonta_africana
ENSIPUG00000019105	Larp1	90	66.631	ENSMFAG00000031651	LARP1	90	66.631	Macaca_fascicularis
ENSIPUG00000019105	Larp1	90	66.594	ENSMMUG00000009411	LARP1	97	65.491	Macaca_mulatta
ENSIPUG00000019105	Larp1	86	67.007	ENSMNEG00000039294	LARP1	97	67.162	Macaca_nemestrina
ENSIPUG00000019105	Larp1	90	66.953	ENSMLEG00000035142	LARP1	90	66.954	Mandrillus_leucophaeus
ENSIPUG00000019105	Larp1	98	72.049	ENSMAMG00000021788	larp1	97	71.010	Mastacembelus_armatus
ENSIPUG00000019105	Larp1	94	77.638	ENSMZEG00005009345	larp1	96	74.632	Maylandia_zebra
ENSIPUG00000019105	Larp1	91	71.930	ENSMGAG00000005696	LARP1	97	71.601	Meleagris_gallopavo
ENSIPUG00000019105	Larp1	93	66.251	ENSMAUG00000001385	Larp1	91	64.985	Mesocricetus_auratus
ENSIPUG00000019105	Larp1	90	67.565	ENSMICG00000000837	LARP1	96	67.783	Microcebus_murinus
ENSIPUG00000019105	Larp1	93	66.044	ENSMOCG00000008920	Larp1	90	65.164	Microtus_ochrogaster
ENSIPUG00000019105	Larp1	92	56.976	ENSMMOG00000013364	larp1	99	55.106	Mola_mola
ENSIPUG00000019105	Larp1	91	67.880	ENSMODG00000008663	LARP1	97	65.953	Monodelphis_domestica
ENSIPUG00000019105	Larp1	99	72.989	ENSMALG00000017180	larp1	93	76.135	Monopterus_albus
ENSIPUG00000019105	Larp1	93	66.044	MGP_CAROLIEiJ_G0016383	Larp1	97	62.500	Mus_caroli
ENSIPUG00000019105	Larp1	93	66.147	ENSMUSG00000037331	Larp1	97	62.595	Mus_musculus
ENSIPUG00000019105	Larp1	97	64.794	MGP_PahariEiJ_G0017518	Larp1	91	64.688	Mus_pahari
ENSIPUG00000019105	Larp1	97	64.990	MGP_SPRETEiJ_G0017225	Larp1	97	62.595	Mus_spretus
ENSIPUG00000019105	Larp1	77	63.591	ENSMPUG00000013564	LARP1	87	63.454	Mustela_putorius_furo
ENSIPUG00000019105	Larp1	91	62.896	ENSMLUG00000002608	LARP1	97	63.627	Myotis_lucifugus
ENSIPUG00000019105	Larp1	92	65.773	ENSNGAG00000001098	Larp1	97	65.880	Nannospalax_galili
ENSIPUG00000019105	Larp1	95	78.242	ENSNBRG00000008963	larp1	98	75.523	Neolamprologus_brichardi
ENSIPUG00000019105	Larp1	90	67.351	ENSNLEG00000016588	LARP1	97	65.907	Nomascus_leucogenys
ENSIPUG00000019105	Larp1	91	61.746	ENSMEUG00000002957	LARP1	97	61.746	Notamacropus_eugenii
ENSIPUG00000019105	Larp1	90	66.416	ENSOPRG00000013014	LARP1	96	66.307	Ochotona_princeps
ENSIPUG00000019105	Larp1	91	65.924	ENSODEG00000010824	LARP1	98	65.572	Octodon_degus
ENSIPUG00000019105	Larp1	94	76.452	ENSONIG00000017308	larp1	88	75.466	Oreochromis_niloticus
ENSIPUG00000019105	Larp1	92	67.789	ENSOANG00000005096	LARP1	95	67.340	Ornithorhynchus_anatinus
ENSIPUG00000019105	Larp1	98	62.406	ENSOCUG00000013066	LARP1	97	62.488	Oryctolagus_cuniculus
ENSIPUG00000019105	Larp1	96	76.780	ENSORLG00000000824	larp1	97	77.722	Oryzias_latipes
ENSIPUG00000019105	Larp1	96	76.780	ENSORLG00020022241	larp1	91	75.439	Oryzias_latipes_hni
ENSIPUG00000019105	Larp1	96	76.963	ENSORLG00015007538	larp1	91	77.066	Oryzias_latipes_hsok
ENSIPUG00000019105	Larp1	99	72.693	ENSOMEG00000003134	larp1	99	73.073	Oryzias_melastigma
ENSIPUG00000019105	Larp1	91	66.561	ENSOGAG00000016750	LARP1	98	66.454	Otolemur_garnettii
ENSIPUG00000019105	Larp1	90	67.100	ENSOARG00000009893	LARP1	98	66.206	Ovis_aries
ENSIPUG00000019105	Larp1	90	66.631	ENSPPAG00000042993	LARP1	91	66.030	Pan_paniscus
ENSIPUG00000019105	Larp1	90	67.314	ENSPPRG00000009780	LARP1	91	67.206	Panthera_pardus
ENSIPUG00000019105	Larp1	90	67.387	ENSPTIG00000007013	LARP1	91	67.495	Panthera_tigris_altaica
ENSIPUG00000019105	Larp1	93	65.589	ENSPTRG00000017447	LARP1	91	65.924	Pan_troglodytes
ENSIPUG00000019105	Larp1	93	65.902	ENSPANG00000008080	LARP1	90	66.846	Papio_anubis
ENSIPUG00000019105	Larp1	94	71.135	ENSPKIG00000017153	-	89	72.379	Paramormyrops_kingsleyae
ENSIPUG00000019105	Larp1	92	79.171	ENSPKIG00000010096	larp1	88	77.180	Paramormyrops_kingsleyae
ENSIPUG00000019105	Larp1	95	75.321	ENSPMGG00000011599	larp1	97	76.414	Periophthalmus_magnuspinnatus
ENSIPUG00000019105	Larp1	90	66.520	ENSPEMG00000022523	Larp1	96	66.520	Peromyscus_maniculatus_bairdii
ENSIPUG00000019105	Larp1	95	67.872	ENSPCIG00000019242	LARP1	85	64.865	Phascolarctos_cinereus
ENSIPUG00000019105	Larp1	95	73.797	ENSPFOG00000005836	larp1	89	72.979	Poecilia_formosa
ENSIPUG00000019105	Larp1	95	74.265	ENSPLAG00000008936	larp1	88	76.366	Poecilia_latipinna
ENSIPUG00000019105	Larp1	95	73.900	ENSPMEG00000013656	larp1	89	72.774	Poecilia_mexicana
ENSIPUG00000019105	Larp1	90	74.973	ENSPREG00000005726	larp1	94	73.792	Poecilia_reticulata
ENSIPUG00000019105	Larp1	90	64.286	ENSPCAG00000006407	LARP1	96	64.169	Procavia_capensis
ENSIPUG00000019105	Larp1	90	62.084	ENSPCOG00000016949	LARP1	96	61.961	Propithecus_coquereli
ENSIPUG00000019105	Larp1	93	66.667	ENSPVAG00000002262	LARP1	88	65.717	Pteropus_vampyrus
ENSIPUG00000019105	Larp1	94	78.033	ENSPNYG00000007938	larp1	96	74.947	Pundamilia_nyererei
ENSIPUG00000019105	Larp1	98	77.094	ENSPNAG00000021427	larp1	97	77.296	Pygocentrus_nattereri
ENSIPUG00000019105	Larp1	91	66.703	ENSRNOG00000031544	Larp1	96	66.703	Rattus_norvegicus
ENSIPUG00000019105	Larp1	90	66.845	ENSRBIG00000038005	LARP1	90	66.846	Rhinopithecus_bieti
ENSIPUG00000019105	Larp1	90	66.845	ENSRROG00000034073	LARP1	97	67.277	Rhinopithecus_roxellana
ENSIPUG00000019105	Larp1	93	65.186	ENSSBOG00000019816	LARP1	98	65.389	Saimiri_boliviensis_boliviensis
ENSIPUG00000019105	Larp1	91	68.501	ENSSHAG00000011115	LARP1	97	66.775	Sarcophilus_harrisii
ENSIPUG00000019105	Larp1	94	77.935	ENSSFOG00015018058	-	88	76.471	Scleropages_formosus
ENSIPUG00000019105	Larp1	92	76.677	ENSSFOG00015020304	larp1	95	72.634	Scleropages_formosus
ENSIPUG00000019105	Larp1	91	78.971	ENSSMAG00000007468	larp1	88	79.306	Scophthalmus_maximus
ENSIPUG00000019105	Larp1	96	75.176	ENSSDUG00000000268	larp1	95	74.201	Seriola_dumerili
ENSIPUG00000019105	Larp1	85	75.503	ENSSLDG00000016505	larp1	95	73.846	Seriola_lalandi_dorsalis
ENSIPUG00000019105	Larp1	57	82.329	ENSSARG00000013907	-	85	79.771	Sorex_araneus
ENSIPUG00000019105	Larp1	93	70.474	ENSSPUG00000012179	-	88	69.048	Sphenodon_punctatus
ENSIPUG00000019105	Larp1	95	76.860	ENSSPAG00000003910	larp1	89	75.723	Stegastes_partitus
ENSIPUG00000019105	Larp1	93	66.044	ENSSSCG00000017069	LARP1	96	67.126	Sus_scrofa
ENSIPUG00000019105	Larp1	90	70.575	ENSTGUG00000000704	LARP1	100	68.621	Taeniopygia_guttata
ENSIPUG00000019105	Larp1	95	77.730	ENSTRUG00000009470	larp1	97	71.070	Takifugu_rubripes
ENSIPUG00000019105	Larp1	87	65.251	ENSTBEG00000003381	LARP1	99	65.135	Tupaia_belangeri
ENSIPUG00000019105	Larp1	90	65.632	ENSTTRG00000015934	LARP1	98	65.960	Tursiops_truncatus
ENSIPUG00000019105	Larp1	93	66.286	ENSUAMG00000019334	LARP1	90	64.523	Ursus_americanus
ENSIPUG00000019105	Larp1	87	69.606	ENSUMAG00000002934	LARP1	96	69.606	Ursus_maritimus
ENSIPUG00000019105	Larp1	85	67.627	ENSVVUG00000004644	LARP1	96	67.630	Vulpes_vulpes
ENSIPUG00000019105	Larp1	94	69.894	ENSXETG00000008413	larp1	96	67.508	Xenopus_tropicalis
ENSIPUG00000019105	Larp1	83	76.171	ENSXCOG00000004022	larp1	87	77.324	Xiphophorus_couchianus
ENSIPUG00000019105	Larp1	95	73.361	ENSXMAG00000018780	larp1	89	72.541	Xiphophorus_maculatus