EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019170 (Gene tree)
Gene ID: 108276071
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 30826 bases
Position: chr15:1776557-1807382
Accession: 108276071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028301	zf-C2H2	PF00096.26	9.5e-30	1	6
ENSIPUP00000028301	zf-C2H2	PF00096.26	9.5e-30	2	6
ENSIPUP00000028301	zf-C2H2	PF00096.26	9.5e-30	3	6
ENSIPUP00000028301	zf-C2H2	PF00096.26	9.5e-30	4	6
ENSIPUP00000028301	zf-C2H2	PF00096.26	9.5e-30	5	6
ENSIPUP00000028301	zf-C2H2	PF00096.26	9.5e-30	6	6
ENSIPUP00000028301	zf-met	PF12874.7	6e-16	1	3
ENSIPUP00000028301	zf-met	PF12874.7	6e-16	2	3
ENSIPUP00000028301	zf-met	PF12874.7	6e-16	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029451	-	3447	XM_017487393	ENSIPUP00000028301	1093 (aa)	XP_017342882	A0A2D0SJL6

Gene Model

Click here to download ENSIPUG00000019170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019170	sall4	52	48.980	ENSIPUG00000015468	-	67	55.102
ENSIPUG00000019170	sall4	99	65.385	ENSIPUG00000016265	SALL1	94	65.385
ENSIPUG00000019170	sall4	53	50.909	ENSIPUG00000004905	znf236	72	51.020
ENSIPUG00000019170	sall4	86	65.385	ENSIPUG00000003378	sall3	87	65.385
ENSIPUG00000019170	sall4	50	78.182	ENSIPUG00000003006	sall3b	53	65.385
ENSIPUG00000019170	sall4	63	53.061	ENSIPUG00000023688	-	92	48.000
ENSIPUG00000019170	sall4	77	63.462	ENSIPUG00000022928	sall1b	75	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019170	sall4	99	45.934	ENSG00000101115	SALL4	99	59.615	Homo_sapiens
ENSIPUG00000019170	sall4	99	65.549	ENSAPOG00000002465	sall4	99	64.791	Acanthochromis_polyacanthus
ENSIPUG00000019170	sall4	99	46.074	ENSAMEG00000013250	-	99	47.378	Ailuropoda_melanoleuca
ENSIPUG00000019170	sall4	99	63.010	ENSACIG00000017298	sall4	99	62.829	Amphilophus_citrinellus
ENSIPUG00000019170	sall4	99	65.820	ENSAOCG00000023678	sall4	99	65.608	Amphiprion_ocellaris
ENSIPUG00000019170	sall4	99	65.608	ENSAPEG00000000751	sall4	99	65.395	Amphiprion_percula
ENSIPUG00000019170	sall4	99	65.639	ENSATEG00000024480	sall4	99	65.458	Anabas_testudineus
ENSIPUG00000019170	sall4	99	54.925	ENSAPLG00000006498	SALL4	99	55.585	Anas_platyrhynchos
ENSIPUG00000019170	sall4	99	52.819	ENSACAG00000012748	SALL4	99	52.905	Anolis_carolinensis
ENSIPUG00000019170	sall4	99	45.769	ENSANAG00000023352	SALL4	85	64.286	Aotus_nancymaae
ENSIPUG00000019170	sall4	99	63.702	ENSACLG00000017851	sall4	99	63.521	Astatotilapia_calliptera
ENSIPUG00000019170	sall4	100	79.531	ENSAMXG00000001254	sall4	100	79.711	Astyanax_mexicanus
ENSIPUG00000019170	sall4	99	43.313	ENSBTAG00000003101	SALL4	99	43.879	Bos_taurus
ENSIPUG00000019170	sall4	80	48.272	ENSCJAG00000000591	SALL4	96	47.836	Callithrix_jacchus
ENSIPUG00000019170	sall4	99	45.837	ENSCAFG00000011738	-	99	46.160	Canis_familiaris
ENSIPUG00000019170	sall4	99	45.697	ENSCAFG00020021870	SALL4	99	46.021	Canis_lupus_dingo
ENSIPUG00000019170	sall4	99	42.918	ENSCHIG00000026270	SALL4	99	43.519	Capra_hircus
ENSIPUG00000019170	sall4	99	45.478	ENSTSYG00000007359	SALL4	99	51.837	Carlito_syrichta
ENSIPUG00000019170	sall4	97	45.078	ENSCAPG00000012135	SALL4	95	45.060	Cavia_aperea
ENSIPUG00000019170	sall4	99	42.368	ENSCCAG00000029512	-	99	60.784	Cebus_capucinus
ENSIPUG00000019170	sall4	99	45.345	ENSCATG00000030757	SALL4	85	64.286	Cercocebus_atys
ENSIPUG00000019170	sall4	99	44.031	ENSCLAG00000010479	SALL4	85	62.500	Chinchilla_lanigera
ENSIPUG00000019170	sall4	99	45.431	ENSCSAG00000015269	SALL4	99	45.368	Chlorocebus_sabaeus
ENSIPUG00000019170	sall4	99	56.460	ENSCPBG00000014995	SALL4	99	56.410	Chrysemys_picta_bellii
ENSIPUG00000019170	sall4	99	45.431	ENSCANG00000036463	SALL4	99	45.259	Colobus_angolensis_palliatus
ENSIPUG00000019170	sall4	99	42.747	ENSCGRG00001019569	Sall4	99	52.340	Cricetulus_griseus_chok1gshd
ENSIPUG00000019170	sall4	99	42.661	ENSCGRG00000000462	Sall4	100	79.012	Cricetulus_griseus_crigri
ENSIPUG00000019170	sall4	99	64.764	ENSCSEG00000014604	sall4	99	64.977	Cynoglossus_semilaevis
ENSIPUG00000019170	sall4	99	65.336	ENSCVAG00000010815	sall4	99	64.882	Cyprinodon_variegatus
ENSIPUG00000019170	sall4	100	75.453	ENSDARG00000044485	sall4	100	75.453	Danio_rerio
ENSIPUG00000019170	sall4	99	45.439	ENSDNOG00000040633	SALL4	99	45.619	Dasypus_novemcinctus
ENSIPUG00000019170	sall4	99	42.416	ENSDORG00000012841	Sall4	97	64.286	Dipodomys_ordii
ENSIPUG00000019170	sall4	60	62.500	ENSETEG00000012475	-	55	63.636	Echinops_telfairi
ENSIPUG00000019170	sall4	99	46.459	ENSECAG00000018533	SALL4	99	46.306	Equus_caballus
ENSIPUG00000019170	sall4	99	43.539	ENSEEUG00000003649	SALL4	99	42.931	Erinaceus_europaeus
ENSIPUG00000019170	sall4	99	67.201	ENSELUG00000005696	sall4	99	67.201	Esox_lucius
ENSIPUG00000019170	sall4	99	45.754	ENSFCAG00000002822	SALL4	85	64.286	Felis_catus
ENSIPUG00000019170	sall4	99	53.805	ENSFALG00000013149	SALL4	99	54.071	Ficedula_albicollis
ENSIPUG00000019170	sall4	99	45.047	ENSFDAG00000017812	SALL4	99	45.859	Fukomys_damarensis
ENSIPUG00000019170	sall4	99	64.428	ENSFHEG00000014187	sall4	99	63.760	Fundulus_heteroclitus
ENSIPUG00000019170	sall4	99	63.282	ENSGMOG00000003822	sall4	99	63.043	Gadus_morhua
ENSIPUG00000019170	sall4	99	54.016	ENSGALG00000041365	SALL4	99	54.674	Gallus_gallus
ENSIPUG00000019170	sall4	99	64.461	ENSGAFG00000019925	sall4	99	64.189	Gambusia_affinis
ENSIPUG00000019170	sall4	99	62.252	ENSGACG00000011124	sall4	99	62.072	Gasterosteus_aculeatus
ENSIPUG00000019170	sall4	99	56.311	ENSGAGG00000002297	SALL4	99	56.134	Gopherus_agassizii
ENSIPUG00000019170	sall4	99	45.960	ENSGGOG00000001832	SALL4	85	64.286	Gorilla_gorilla
ENSIPUG00000019170	sall4	99	63.702	ENSHBUG00000007327	sall4	99	63.521	Haplochromis_burtoni
ENSIPUG00000019170	sall4	97	45.648	ENSHGLG00000009043	SALL4	94	45.111	Heterocephalus_glaber_female
ENSIPUG00000019170	sall4	97	45.648	ENSHGLG00100002722	SALL4	94	45.295	Heterocephalus_glaber_male
ENSIPUG00000019170	sall4	99	63.373	ENSHCOG00000008519	sall4	99	63.521	Hippocampus_comes
ENSIPUG00000019170	sall4	65	53.333	ENSSTOG00000025002	SALL4	100	84.507	Ictidomys_tridecemlineatus
ENSIPUG00000019170	sall4	99	45.869	ENSJJAG00000020688	Sall4	99	85.915	Jaculus_jaculus
ENSIPUG00000019170	sall4	99	64.240	ENSKMAG00000002501	sall4	99	64.305	Kryptolebias_marmoratus
ENSIPUG00000019170	sall4	99	64.642	ENSLBEG00000019951	sall4	99	64.551	Labrus_bergylta
ENSIPUG00000019170	sall4	96	48.897	ENSLACG00000013898	SALL4	99	59.043	Latimeria_chalumnae
ENSIPUG00000019170	sall4	99	66.303	ENSLOCG00000002427	sall4	99	66.213	Lepisosteus_oculatus
ENSIPUG00000019170	sall4	99	45.707	ENSLAFG00000004309	SALL4	99	45.416	Loxodonta_africana
ENSIPUG00000019170	sall4	99	45.603	ENSMFAG00000027169	SALL4	99	45.667	Macaca_fascicularis
ENSIPUG00000019170	sall4	87	47.541	ENSMMUG00000003870	SALL4	99	59.615	Macaca_mulatta
ENSIPUG00000019170	sall4	87	47.541	ENSMNEG00000035995	SALL4	85	64.286	Macaca_nemestrina
ENSIPUG00000019170	sall4	99	45.603	ENSMLEG00000030467	SALL4	99	45.754	Mandrillus_leucophaeus
ENSIPUG00000019170	sall4	99	65.022	ENSMAMG00000005223	sall4	99	64.843	Mastacembelus_armatus
ENSIPUG00000019170	sall4	99	63.612	ENSMZEG00005023418	sall4	99	63.430	Maylandia_zebra
ENSIPUG00000019170	sall4	78	54.397	ENSMGAG00000009344	SALL4	100	63.462	Meleagris_gallopavo
ENSIPUG00000019170	sall4	99	44.090	ENSMAUG00000015814	Sall4	100	86.111	Mesocricetus_auratus
ENSIPUG00000019170	sall4	99	46.585	ENSMICG00000000027	SALL4	86	64.286	Microcebus_murinus
ENSIPUG00000019170	sall4	99	43.674	ENSMOCG00000018245	Sall4	100	83.562	Microtus_ochrogaster
ENSIPUG00000019170	sall4	99	66.031	ENSMMOG00000014929	sall4	99	65.486	Mola_mola
ENSIPUG00000019170	sall4	99	50.173	ENSMODG00000016387	SALL4	97	50.433	Monodelphis_domestica
ENSIPUG00000019170	sall4	99	65.730	ENSMALG00000018709	sall4	99	65.663	Monopterus_albus
ENSIPUG00000019170	sall4	99	42.403	MGP_CAROLIEiJ_G0024723	Sall4	100	86.111	Mus_caroli
ENSIPUG00000019170	sall4	99	42.638	ENSMUSG00000027547	Sall4	100	86.111	Mus_musculus
ENSIPUG00000019170	sall4	99	41.892	MGP_PahariEiJ_G0026164	Sall4	100	86.111	Mus_pahari
ENSIPUG00000019170	sall4	99	42.760	MGP_SPRETEiJ_G0025643	Sall4	100	86.111	Mus_spretus
ENSIPUG00000019170	sall4	99	45.306	ENSMPUG00000017543	SALL4	96	45.281	Mustela_putorius_furo
ENSIPUG00000019170	sall4	99	42.934	ENSMLUG00000008405	-	99	42.756	Myotis_lucifugus
ENSIPUG00000019170	sall4	97	46.259	ENSMLUG00000007060	-	98	45.826	Myotis_lucifugus
ENSIPUG00000019170	sall4	99	34.863	ENSMLUG00000028073	-	99	33.894	Myotis_lucifugus
ENSIPUG00000019170	sall4	99	43.654	ENSNGAG00000017833	Sall4	93	64.286	Nannospalax_galili
ENSIPUG00000019170	sall4	99	63.760	ENSNBRG00000001829	sall4	99	63.579	Neolamprologus_brichardi
ENSIPUG00000019170	sall4	99	45.611	ENSNLEG00000007013	SALL4	99	46.094	Nomascus_leucogenys
ENSIPUG00000019170	sall4	85	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSIPUG00000019170	sall4	99	45.739	ENSOPRG00000011640	SALL4	99	45.170	Ochotona_princeps
ENSIPUG00000019170	sall4	99	64.461	ENSONIG00000016557	sall4	99	64.370	Oreochromis_niloticus
ENSIPUG00000019170	sall4	99	53.637	ENSOANG00000008667	SALL4	97	54.355	Ornithorhynchus_anatinus
ENSIPUG00000019170	sall4	97	46.550	ENSOCUG00000011797	SALL4	98	46.133	Oryctolagus_cuniculus
ENSIPUG00000019170	sall4	99	62.613	ENSORLG00000016130	sall4	99	62.613	Oryzias_latipes
ENSIPUG00000019170	sall4	99	62.341	ENSORLG00020007339	sall4	99	62.341	Oryzias_latipes_hni
ENSIPUG00000019170	sall4	99	62.523	ENSORLG00015002265	sall4	99	62.523	Oryzias_latipes_hsok
ENSIPUG00000019170	sall4	99	62.613	ENSOMEG00000017344	sall4	99	62.613	Oryzias_melastigma
ENSIPUG00000019170	sall4	97	47.706	ENSOGAG00000013799	SALL4	99	47.210	Otolemur_garnettii
ENSIPUG00000019170	sall4	99	41.871	ENSOARG00000014570	SALL4	99	42.096	Ovis_aries
ENSIPUG00000019170	sall4	99	45.960	ENSPPAG00000038064	SALL4	85	64.286	Pan_paniscus
ENSIPUG00000019170	sall4	99	45.368	ENSPPRG00000008677	SALL4	85	64.286	Panthera_pardus
ENSIPUG00000019170	sall4	99	45.960	ENSPTRG00000013631	SALL4	85	64.286	Pan_troglodytes
ENSIPUG00000019170	sall4	87	47.541	ENSPANG00000021792	SALL4	85	64.286	Papio_anubis
ENSIPUG00000019170	sall4	99	66.999	ENSPKIG00000007074	sall4	99	66.757	Paramormyrops_kingsleyae
ENSIPUG00000019170	sall4	99	55.477	ENSPSIG00000009066	SALL4	99	55.349	Pelodiscus_sinensis
ENSIPUG00000019170	sall4	99	59.021	ENSPMGG00000022551	sall4	99	59.021	Periophthalmus_magnuspinnatus
ENSIPUG00000019170	sall4	99	44.021	ENSPEMG00000022706	Sall4	100	86.111	Peromyscus_maniculatus_bairdii
ENSIPUG00000019170	sall4	99	52.136	ENSPCIG00000022838	SALL4	97	52.705	Phascolarctos_cinereus
ENSIPUG00000019170	sall4	99	63.521	ENSPFOG00000001442	sall4	99	63.249	Poecilia_formosa
ENSIPUG00000019170	sall4	99	63.612	ENSPLAG00000008760	sall4	99	63.339	Poecilia_latipinna
ENSIPUG00000019170	sall4	99	63.702	ENSPMEG00000008497	sall4	99	63.430	Poecilia_mexicana
ENSIPUG00000019170	sall4	99	64.007	ENSPREG00000021140	sall4	99	63.735	Poecilia_reticulata
ENSIPUG00000019170	sall4	99	45.142	ENSPPYG00000011138	SALL4	99	45.164	Pongo_abelii
ENSIPUG00000019170	sall4	99	43.068	ENSPCAG00000004726	SALL4	99	42.968	Procavia_capensis
ENSIPUG00000019170	sall4	99	45.841	ENSPCOG00000016321	SALL4	99	45.808	Propithecus_coquereli
ENSIPUG00000019170	sall4	94	45.064	ENSPVAG00000002075	SALL4	94	44.768	Pteropus_vampyrus
ENSIPUG00000019170	sall4	99	63.306	ENSPNYG00000021738	sall4	99	63.124	Pundamilia_nyererei
ENSIPUG00000019170	sall4	100	82.787	ENSPNAG00000020929	sall4	100	82.514	Pygocentrus_nattereri
ENSIPUG00000019170	sall4	99	42.357	ENSRNOG00000050035	Sall4	82	62.500	Rattus_norvegicus
ENSIPUG00000019170	sall4	99	45.345	ENSRBIG00000039876	SALL4	99	45.172	Rhinopithecus_bieti
ENSIPUG00000019170	sall4	99	45.259	ENSRROG00000036585	SALL4	99	45.195	Rhinopithecus_roxellana
ENSIPUG00000019170	sall4	99	45.960	ENSSBOG00000030011	SALL4	86	64.286	Saimiri_boliviensis_boliviensis
ENSIPUG00000019170	sall4	96	65.385	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSIPUG00000019170	sall4	99	65.072	ENSSFOG00015021075	sall4	99	65.072	Scleropages_formosus
ENSIPUG00000019170	sall4	99	64.887	ENSSMAG00000019218	sall4	99	64.615	Scophthalmus_maximus
ENSIPUG00000019170	sall4	99	66.848	ENSSDUG00000004657	sall4	99	66.667	Seriola_dumerili
ENSIPUG00000019170	sall4	99	66.304	ENSSLDG00000004973	sall4	99	66.667	Seriola_lalandi_dorsalis
ENSIPUG00000019170	sall4	99	65.426	ENSSPAG00000001978	sall4	99	65.032	Stegastes_partitus
ENSIPUG00000019170	sall4	99	45.455	ENSSSCG00000007479	SALL4	99	44.987	Sus_scrofa
ENSIPUG00000019170	sall4	99	64.247	ENSTRUG00000007410	sall4	99	63.975	Takifugu_rubripes
ENSIPUG00000019170	sall4	99	63.669	ENSTNIG00000012460	sall4	99	63.488	Tetraodon_nigroviridis
ENSIPUG00000019170	sall4	97	44.821	ENSTTRG00000007753	SALL4	98	44.414	Tursiops_truncatus
ENSIPUG00000019170	sall4	99	45.855	ENSUAMG00000010113	SALL4	99	45.855	Ursus_americanus
ENSIPUG00000019170	sall4	97	46.140	ENSUMAG00000024274	SALL4	98	45.980	Ursus_maritimus
ENSIPUG00000019170	sall4	99	51.653	ENSXETG00000012326	sall4	99	51.475	Xenopus_tropicalis
ENSIPUG00000019170	sall4	99	58.590	ENSXCOG00000015467	sall4	99	57.776	Xiphophorus_couchianus
ENSIPUG00000019170	sall4	99	58.386	ENSXMAG00000012692	sall4	96	67.059	Xiphophorus_maculatus