EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019266 (Gene tree)
Gene ID: 108255817
Gene Symbol: rabl6
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 21038 bases
Position: chr22:3011088-3032125
Accession: 108255817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028457	MMR_HSR1	PF01926.23	5.1e-05	1	1
ENSIPUP00000028486	MMR_HSR1	PF01926.23	5.1e-05	1	1
ENSIPUP00000028444	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029618	-	2634	XM_017452073	ENSIPUP00000028457	750 (aa)	XP_017307562	A0A2D0PNH4
ENSIPUT00000029605	-	2664	XM_017452071	ENSIPUP00000028444	760 (aa)	XP_017307560	A0A2D0PR51
ENSIPUT00000029648	-	2599	-	ENSIPUP00000028486	750 (aa)	-	A0A2D0PNH4

Gene Model

Click here to download ENSIPUG00000019266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019266	rabl6	100	58.077	ENSACIG00000010721	rabl6b	100	58.344	Amphilophus_citrinellus
ENSIPUG00000019266	rabl6	100	62.484	ENSATEG00000012055	rabl6b	100	64.462	Anabas_testudineus
ENSIPUG00000019266	rabl6	100	64.861	ENSAMXG00000038771	rabl6b	100	65.522	Astyanax_mexicanus
ENSIPUG00000019266	rabl6	100	56.298	ENSCSEG00000012430	-	95	62.447	Cynoglossus_semilaevis
ENSIPUG00000019266	rabl6	100	62.276	ENSCSEG00000016135	rabl6b	100	59.669	Cynoglossus_semilaevis
ENSIPUG00000019266	rabl6	100	61.217	ENSELUG00000004448	rabl6b	90	74.413	Esox_lucius
ENSIPUG00000019266	rabl6	100	62.024	ENSGAFG00000013561	rabl6b	99	70.726	Gambusia_affinis
ENSIPUG00000019266	rabl6	100	62.468	ENSGACG00000005242	rabl6b	100	62.082	Gasterosteus_aculeatus
ENSIPUG00000019266	rabl6	84	56.495	ENSLOCG00000001402	rabl6b	77	87.854	Lepisosteus_oculatus
ENSIPUG00000019266	rabl6	100	60.309	ENSMAMG00000019516	rabl6b	100	61.224	Mastacembelus_armatus
ENSIPUG00000019266	rabl6	63	64.076	ENSMMOG00000009459	rabl6b	99	59.664	Mola_mola
ENSIPUG00000019266	rabl6	100	65.649	ENSMALG00000002029	rabl6b	100	64.796	Monopterus_albus
ENSIPUG00000019266	rabl6	61	59.959	ENSNBRG00000012512	rabl6b	98	58.750	Neolamprologus_brichardi
ENSIPUG00000019266	rabl6	100	62.763	ENSONIG00000010408	rabl6b	100	64.258	Oreochromis_niloticus
ENSIPUG00000019266	rabl6	100	62.082	ENSORLG00020017557	rabl6b	100	62.564	Oryzias_latipes_hni
ENSIPUG00000019266	rabl6	89	63.676	ENSORLG00015007848	rabl6b	89	73.770	Oryzias_latipes_hsok
ENSIPUG00000019266	rabl6	89	62.767	ENSOMEG00000022840	rabl6b	96	65.698	Oryzias_melastigma
ENSIPUG00000019266	rabl6	100	61.097	ENSPKIG00000007459	RABL6	100	60.102	Paramormyrops_kingsleyae
ENSIPUG00000019266	rabl6	89	60.000	ENSPCIG00000023722	RABL6	92	60.845	Phascolarctos_cinereus
ENSIPUG00000019266	rabl6	100	61.153	ENSPFOG00000003250	rabl6b	100	63.415	Poecilia_formosa
ENSIPUG00000019266	rabl6	100	61.278	ENSPLAG00000019562	rabl6b	100	63.543	Poecilia_latipinna
ENSIPUG00000019266	rabl6	100	61.104	ENSPMEG00000020472	rabl6b	100	63.882	Poecilia_mexicana
ENSIPUG00000019266	rabl6	90	65.571	ENSPREG00000014116	rabl6b	94	66.000	Poecilia_reticulata
ENSIPUG00000019266	rabl6	100	68.366	ENSPNAG00000010857	rabl6b	100	69.481	Pygocentrus_nattereri
ENSIPUG00000019266	rabl6	99	64.844	ENSSFOG00015013414	-	99	65.269	Scleropages_formosus
ENSIPUG00000019266	rabl6	100	62.451	ENSSFOG00015017388	RABL6	100	63.542	Scleropages_formosus
ENSIPUG00000019266	rabl6	88	63.623	ENSSMAG00000012543	rabl6b	96	63.338	Scophthalmus_maximus
ENSIPUG00000019266	rabl6	100	65.677	ENSSDUG00000006564	rabl6b	100	64.820	Seriola_dumerili
ENSIPUG00000019266	rabl6	100	58.942	ENSSPAG00000021033	rabl6b	96	65.801	Stegastes_partitus
ENSIPUG00000019266	rabl6	99	59.432	ENSTNIG00000010595	rabl6b	100	60.000	Tetraodon_nigroviridis