EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019271 (Gene tree)
Gene ID: 108279265
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108279265
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 1572 bases
Position: chr18:10168773-10170344
Accession: 108279265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028448	Exo_endo_phos	PF03372.23	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029609	-	1572	XM_017493361	ENSIPUP00000028448	523 (aa)	XP_017348850	A0A2D0T230

Gene Model

Click here to download ENSIPUG00000019271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019271	-	99	56.955	ENSIPUG00000003758	-	86	56.955
ENSIPUG00000019271	-	93	56.883	ENSIPUG00000003756	-	92	56.883
ENSIPUG00000019271	-	99	53.604	ENSIPUG00000009818	-	99	53.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019271	-	86	31.287	ENSAMXG00000019756	-	52	31.287	Astyanax_mexicanus
ENSIPUG00000019271	-	95	50.588	ENSAMXG00000032864	-	90	50.588	Astyanax_mexicanus
ENSIPUG00000019271	-	86	30.059	ENSDARG00000086613	si:dkey-266f7.10	90	30.845	Danio_rerio