EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019311 (Gene tree)
Gene ID: 108278224
Gene Symbol: -
Alias: -
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 25744 bases
Position: chr17:8076872-8102615
Accession: 108278224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028549	RRM_1	PF00076.22	6.1e-06	1	1
ENSIPUP00000028506	RRM_1	PF00076.22	6.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029671	-	2334	XM_017491437	ENSIPUP00000028506	683 (aa)	XP_017346926	A0A2D0SWM1
ENSIPUT00000029715	-	2241	-	ENSIPUP00000028549	695 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000019311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019311	-	57	66.901	ENSG00000156304	SCAF4	53	53.333	Homo_sapiens
ENSIPUG00000019311	-	57	66.901	ENSCJAG00000008993	SCAF4	57	55.455	Callithrix_jacchus
ENSIPUG00000019311	-	55	66.901	ENSCAFG00020026019	SCAF4	50	68.254	Canis_lupus_dingo
ENSIPUG00000019311	-	67	59.763	ENSDARG00000018854	scaf4b	66	60.112	Danio_rerio
ENSIPUG00000019311	-	74	45.106	ENSLACG00000001394	SCAF8	55	44.695	Latimeria_chalumnae
ENSIPUG00000019311	-	59	65.385	ENSONIG00000005610	scaf4b	67	68.276	Oreochromis_niloticus
ENSIPUG00000019311	-	57	66.906	ENSONIG00000004687	scaf4a	60	54.404	Oreochromis_niloticus
ENSIPUG00000019311	-	62	59.091	ENSPKIG00000022408	scaf4a	64	59.140	Paramormyrops_kingsleyae
ENSIPUG00000019311	-	57	59.420	ENSPMAG00000006192	SCAF8	74	50.562	Petromyzon_marinus
ENSIPUG00000019311	-	57	68.794	ENSPLAG00000001972	scaf4a	53	68.212	Poecilia_latipinna