EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019349 (Gene tree)
Gene ID: 108271996
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10400 bases
Position: chr11:15695248-15705647
Accession: 108271996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028573	RRM_1	PF00076.22	9.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000029739	-	4019	XM_017480038	ENSIPUP00000028573	236 (aa)	XP_017335527	A0A2D0RYE6

Gene Model

Click here to download ENSIPUG00000019349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019349	-	75	37.500	ENSIPUG00000021097	msi2a	67	37.500
ENSIPUG00000019349	-	65	71.698	ENSIPUG00000014727	rbm24	100	62.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019349	-	95	65.086	ENSG00000132819	RBM38	94	87.288	Homo_sapiens
ENSIPUG00000019349	-	100	72.083	ENSAPOG00000009939	-	100	72.874	Acanthochromis_polyacanthus
ENSIPUG00000019349	-	100	60.241	ENSAPOG00000003301	rbm38	98	60.241	Acanthochromis_polyacanthus
ENSIPUG00000019349	-	100	72.951	ENSACIG00000012502	-	100	91.525	Amphilophus_citrinellus
ENSIPUG00000019349	-	100	60.000	ENSACIG00000000010	rbm38	98	60.000	Amphilophus_citrinellus
ENSIPUG00000019349	-	97	70.833	ENSAOCG00000012559	RBM38	100	72.500	Amphiprion_ocellaris
ENSIPUG00000019349	-	100	60.241	ENSAOCG00000013497	-	98	60.241	Amphiprion_ocellaris
ENSIPUG00000019349	-	100	70.850	ENSAPEG00000023581	-	100	72.470	Amphiprion_percula
ENSIPUG00000019349	-	100	60.241	ENSAPEG00000013137	rbm38	98	60.241	Amphiprion_percula
ENSIPUG00000019349	-	99	61.250	ENSATEG00000016366	rbm38	99	61.250	Anabas_testudineus
ENSIPUG00000019349	-	100	72.245	ENSATEG00000016710	-	100	73.061	Anabas_testudineus
ENSIPUG00000019349	-	95	65.517	ENSACAG00000016238	RBM38	95	64.198	Anolis_carolinensis
ENSIPUG00000019349	-	94	65.801	ENSANAG00000031959	RBM38	82	91.089	Aotus_nancymaae
ENSIPUG00000019349	-	100	72.245	ENSACLG00000019514	-	100	72.245	Astatotilapia_calliptera
ENSIPUG00000019349	-	100	80.591	ENSAMXG00000015601	-	100	84.388	Astyanax_mexicanus
ENSIPUG00000019349	-	96	60.526	ENSAMXG00000038120	rbm38	97	62.719	Astyanax_mexicanus
ENSIPUG00000019349	-	95	65.086	ENSBTAG00000008105	RBM38	91	65.086	Bos_taurus
ENSIPUG00000019349	-	55	65.385	WBGene00006321	sup-12	59	80.899	Caenorhabditis_elegans
ENSIPUG00000019349	-	95	65.948	ENSCJAG00000019139	RBM38	82	91.089	Callithrix_jacchus
ENSIPUG00000019349	-	95	67.241	ENSCAFG00020021943	RBM38	91	67.241	Canis_lupus_dingo
ENSIPUG00000019349	-	95	65.236	ENSCHIG00000002609	RBM38	91	65.236	Capra_hircus
ENSIPUG00000019349	-	95	66.379	ENSCPOG00000012781	RBM38	91	66.379	Cavia_porcellus
ENSIPUG00000019349	-	95	65.948	ENSCCAG00000036872	RBM38	82	91.089	Cebus_capucinus
ENSIPUG00000019349	-	95	65.086	ENSCATG00000032133	RBM38	82	91.089	Cercocebus_atys
ENSIPUG00000019349	-	95	66.379	ENSCLAG00000005906	RBM38	94	66.379	Chinchilla_lanigera
ENSIPUG00000019349	-	95	65.086	ENSCSAG00000015503	RBM38	91	65.086	Chlorocebus_sabaeus
ENSIPUG00000019349	-	92	68.889	ENSCPBG00000024059	RBM38	99	68.889	Chrysemys_picta_bellii
ENSIPUG00000019349	-	65	59.877	ENSCING00000025102	-	96	48.684	Ciona_intestinalis
ENSIPUG00000019349	-	63	63.462	ENSCSAVG00000001132	-	58	63.462	Ciona_savignyi
ENSIPUG00000019349	-	94	50.442	ENSCANG00000030105	-	79	50.442	Colobus_angolensis_palliatus
ENSIPUG00000019349	-	100	59.921	ENSCGRG00001012928	Rbm38	100	61.111	Cricetulus_griseus_chok1gshd
ENSIPUG00000019349	-	70	66.667	ENSCSEG00000020943	rbm38	63	62.827	Cynoglossus_semilaevis
ENSIPUG00000019349	-	100	71.020	ENSCSEG00000004701	-	100	72.245	Cynoglossus_semilaevis
ENSIPUG00000019349	-	96	59.167	ENSCVAG00000015952	rbm38	94	60.417	Cyprinodon_variegatus
ENSIPUG00000019349	-	100	72.245	ENSCVAG00000005472	-	100	73.469	Cyprinodon_variegatus
ENSIPUG00000019349	-	99	67.797	ENSDARG00000058818	rbm38	100	67.797	Danio_rerio
ENSIPUG00000019349	-	94	65.066	ENSDNOG00000032004	RBM38	100	65.066	Dasypus_novemcinctus
ENSIPUG00000019349	-	95	64.655	ENSECAG00000007700	RBM38	91	64.655	Equus_caballus
ENSIPUG00000019349	-	95	63.948	ENSEEUG00000013489	RBM38	91	64.807	Erinaceus_europaeus
ENSIPUG00000019349	-	100	72.653	ENSELUG00000005849	-	100	74.694	Esox_lucius
ENSIPUG00000019349	-	76	73.770	ENSELUG00000000585	-	80	73.770	Esox_lucius
ENSIPUG00000019349	-	95	65.086	ENSFCAG00000042916	RBM38	82	90.099	Felis_catus
ENSIPUG00000019349	-	70	76.923	ENSFALG00000010805	RBM38	88	76.923	Ficedula_albicollis
ENSIPUG00000019349	-	100	69.959	ENSFHEG00000006160	-	100	69.959	Fundulus_heteroclitus
ENSIPUG00000019349	-	100	57.371	ENSFHEG00000017748	rbm38	98	57.371	Fundulus_heteroclitus
ENSIPUG00000019349	-	75	77.174	ENSGMOG00000016655	-	98	80.435	Gadus_morhua
ENSIPUG00000019349	-	92	67.857	ENSGALG00000026081	RBM38	99	69.196	Gallus_gallus
ENSIPUG00000019349	-	83	67.500	ENSGACG00000015224	rbm38	97	67.500	Gasterosteus_aculeatus
ENSIPUG00000019349	-	94	70.175	ENSGACG00000009873	-	100	70.175	Gasterosteus_aculeatus
ENSIPUG00000019349	-	92	69.333	ENSGAGG00000001187	RBM38	99	69.333	Gopherus_agassizii
ENSIPUG00000019349	-	100	72.245	ENSHBUG00000011778	-	100	72.245	Haplochromis_burtoni
ENSIPUG00000019349	-	100	60.400	ENSHBUG00000012058	rbm38	98	60.400	Haplochromis_burtoni
ENSIPUG00000019349	-	95	63.362	ENSHGLG00000015077	RBM38	91	65.517	Heterocephalus_glaber_female
ENSIPUG00000019349	-	82	78.283	ENSHCOG00000005622	-	57	80.303	Hippocampus_comes
ENSIPUG00000019349	-	87	55.072	ENSHCOG00000019040	rbm38	83	55.072	Hippocampus_comes
ENSIPUG00000019349	-	92	55.652	ENSKMAG00000012402	rbm38	98	56.087	Kryptolebias_marmoratus
ENSIPUG00000019349	-	100	70.833	ENSLBEG00000016163	RBM38	100	71.667	Labrus_bergylta
ENSIPUG00000019349	-	100	60.400	ENSLBEG00000018878	rbm38	98	60.400	Labrus_bergylta
ENSIPUG00000019349	-	100	73.418	ENSLOCG00000003456	rbm38	100	73.418	Lepisosteus_oculatus
ENSIPUG00000019349	-	95	65.086	ENSMFAG00000043808	RBM38	82	91.089	Macaca_fascicularis
ENSIPUG00000019349	-	95	65.086	ENSMMUG00000031391	RBM38	82	91.089	Macaca_mulatta
ENSIPUG00000019349	-	95	65.086	ENSMNEG00000034683	RBM38	82	91.089	Macaca_nemestrina
ENSIPUG00000019349	-	100	60.643	ENSMAMG00000024135	rbm38	98	60.643	Mastacembelus_armatus
ENSIPUG00000019349	-	100	71.837	ENSMAMG00000020499	RBM38	100	72.653	Mastacembelus_armatus
ENSIPUG00000019349	-	100	72.245	ENSMZEG00005000849	-	100	72.245	Maylandia_zebra
ENSIPUG00000019349	-	100	60.400	ENSMZEG00005026036	rbm38	98	60.400	Maylandia_zebra
ENSIPUG00000019349	-	100	60.317	ENSMAUG00000021211	Rbm38	100	61.508	Mesocricetus_auratus
ENSIPUG00000019349	-	94	66.234	ENSMICG00000038011	RBM38	100	66.234	Microcebus_murinus
ENSIPUG00000019349	-	100	60.317	ENSMOCG00000008715	Rbm38	100	61.111	Microtus_ochrogaster
ENSIPUG00000019349	-	100	70.445	ENSMMOG00000020051	-	100	71.660	Mola_mola
ENSIPUG00000019349	-	100	64.228	ENSMODG00000016458	RBM38	100	65.447	Monodelphis_domestica
ENSIPUG00000019349	-	78	81.481	ENSMALG00000004680	RBM38	72	81.481	Monopterus_albus
ENSIPUG00000019349	-	71	71.176	ENSMALG00000022327	rbm38	72	71.176	Monopterus_albus
ENSIPUG00000019349	-	100	59.127	MGP_CAROLIEiJ_G0024745	Rbm38	100	61.111	Mus_caroli
ENSIPUG00000019349	-	100	59.127	ENSMUSG00000027510	Rbm38	100	61.111	Mus_musculus
ENSIPUG00000019349	-	100	60.317	MGP_PahariEiJ_G0026186	Rbm38	100	62.302	Mus_pahari
ENSIPUG00000019349	-	100	59.524	MGP_SPRETEiJ_G0025665	Rbm38	100	61.508	Mus_spretus
ENSIPUG00000019349	-	75	73.656	ENSMPUG00000006518	RBM38	91	73.656	Mustela_putorius_furo
ENSIPUG00000019349	-	94	63.636	ENSMLUG00000011140	RBM38	100	63.636	Myotis_lucifugus
ENSIPUG00000019349	-	100	72.470	ENSNBRG00000022545	-	100	72.470	Neolamprologus_brichardi
ENSIPUG00000019349	-	100	60.400	ENSNBRG00000022685	rbm38	98	60.400	Neolamprologus_brichardi
ENSIPUG00000019349	-	55	71.324	ENSMEUG00000005475	-	100	71.324	Notamacropus_eugenii
ENSIPUG00000019349	-	95	66.379	ENSODEG00000007980	RBM38	91	66.379	Octodon_degus
ENSIPUG00000019349	-	99	60.241	ENSONIG00000017073	rbm38	100	60.241	Oreochromis_niloticus
ENSIPUG00000019349	-	99	72.358	ENSONIG00000020324	-	100	72.358	Oreochromis_niloticus
ENSIPUG00000019349	-	92	68.018	ENSOANG00000009259	RBM38	81	68.018	Ornithorhynchus_anatinus
ENSIPUG00000019349	-	96	56.432	ENSORLG00000012154	rbm38	94	56.432	Oryzias_latipes
ENSIPUG00000019349	-	100	68.675	ENSORLG00000027180	-	100	70.683	Oryzias_latipes
ENSIPUG00000019349	-	100	68.675	ENSORLG00020020751	-	100	70.683	Oryzias_latipes_hni
ENSIPUG00000019349	-	96	56.846	ENSORLG00020017871	rbm38	94	56.846	Oryzias_latipes_hni
ENSIPUG00000019349	-	100	69.355	ENSORLG00015017040	-	100	71.774	Oryzias_latipes_hsok
ENSIPUG00000019349	-	94	58.952	ENSORLG00015012606	rbm38	94	56.846	Oryzias_latipes_hsok
ENSIPUG00000019349	-	100	68.826	ENSOMEG00000023912	-	100	71.660	Oryzias_melastigma
ENSIPUG00000019349	-	92	58.798	ENSOMEG00000006805	rbm38	92	58.798	Oryzias_melastigma
ENSIPUG00000019349	-	95	65.517	ENSOGAG00000029136	RBM38	90	65.517	Otolemur_garnettii
ENSIPUG00000019349	-	95	65.086	ENSPPRG00000009507	RBM38	82	90.099	Panthera_pardus
ENSIPUG00000019349	-	53	85.714	ENSPTRG00000045845	-	68	85.714	Pan_troglodytes
ENSIPUG00000019349	-	76	73.262	ENSPTRG00000013661	RBM38	82	91.089	Pan_troglodytes
ENSIPUG00000019349	-	99	50.410	ENSPANG00000033127	-	100	50.410	Papio_anubis
ENSIPUG00000019349	-	95	65.086	ENSPANG00000020919	-	82	91.089	Papio_anubis
ENSIPUG00000019349	-	100	68.465	ENSPKIG00000018122	-	95	89.189	Paramormyrops_kingsleyae
ENSIPUG00000019349	-	100	69.835	ENSPKIG00000025417	rbm38	100	69.835	Paramormyrops_kingsleyae
ENSIPUG00000019349	-	95	68.534	ENSPSIG00000011649	RBM38	93	68.534	Pelodiscus_sinensis
ENSIPUG00000019349	-	100	66.532	ENSPMGG00000017094	-	100	67.339	Periophthalmus_magnuspinnatus
ENSIPUG00000019349	-	96	57.083	ENSPMGG00000011343	rbm38	95	58.333	Periophthalmus_magnuspinnatus
ENSIPUG00000019349	-	100	63.968	ENSPCIG00000013648	RBM38	100	63.968	Phascolarctos_cinereus
ENSIPUG00000019349	-	100	55.512	ENSPFOG00000011658	rbm38	98	57.087	Poecilia_formosa
ENSIPUG00000019349	-	100	56.299	ENSPLAG00000005218	rbm38	98	57.087	Poecilia_latipinna
ENSIPUG00000019349	-	100	72.065	ENSPLAG00000002500	-	100	72.065	Poecilia_latipinna
ENSIPUG00000019349	-	100	55.512	ENSPMEG00000015770	rbm38	98	57.087	Poecilia_mexicana
ENSIPUG00000019349	-	100	55.512	ENSPREG00000007398	rbm38	98	57.087	Poecilia_reticulata
ENSIPUG00000019349	-	95	66.379	ENSPCOG00000026201	RBM38	81	91.089	Propithecus_coquereli
ENSIPUG00000019349	-	100	40.711	ENSPVAG00000006457	RBM38	100	42.188	Pteropus_vampyrus
ENSIPUG00000019349	-	100	72.245	ENSPNYG00000019727	-	100	92.373	Pundamilia_nyererei
ENSIPUG00000019349	-	100	60.000	ENSPNYG00000021373	rbm38	98	59.600	Pundamilia_nyererei
ENSIPUG00000019349	-	100	81.857	ENSPNAG00000015123	-	100	84.810	Pygocentrus_nattereri
ENSIPUG00000019349	-	96	69.869	ENSPNAG00000010596	rbm38	97	69.869	Pygocentrus_nattereri
ENSIPUG00000019349	-	100	61.905	ENSRNOG00000006420	Rbm38	100	61.905	Rattus_norvegicus
ENSIPUG00000019349	-	95	54.464	ENSRROG00000036388	-	90	54.464	Rhinopithecus_roxellana
ENSIPUG00000019349	-	94	65.801	ENSSBOG00000031053	RBM38	93	91.089	Saimiri_boliviensis_boliviensis
ENSIPUG00000019349	-	100	66.942	ENSSFOG00015004453	rbm38	100	71.074	Scleropages_formosus
ENSIPUG00000019349	-	100	72.470	ENSSDUG00000021082	RBM38	100	73.279	Seriola_dumerili
ENSIPUG00000019349	-	100	60.400	ENSSDUG00000022611	rbm38	98	60.400	Seriola_dumerili
ENSIPUG00000019349	-	100	60.400	ENSSLDG00000010845	rbm38	99	60.081	Seriola_lalandi_dorsalis
ENSIPUG00000019349	-	100	72.065	ENSSLDG00000011778	RBM38	100	72.874	Seriola_lalandi_dorsalis
ENSIPUG00000019349	-	100	72.065	ENSSPAG00000020989	RBM38	100	72.874	Stegastes_partitus
ENSIPUG00000019349	-	100	60.400	ENSSPAG00000011113	rbm38	98	60.400	Stegastes_partitus
ENSIPUG00000019349	-	95	66.810	ENSSSCG00000007504	RBM38	91	66.810	Sus_scrofa
ENSIPUG00000019349	-	96	61.441	ENSTRUG00000024954	rbm38	94	61.864	Takifugu_rubripes
ENSIPUG00000019349	-	100	70.565	ENSTRUG00000019869	-	100	70.565	Takifugu_rubripes
ENSIPUG00000019349	-	94	73.568	ENSTNIG00000007093	-	100	73.568	Tetraodon_nigroviridis
ENSIPUG00000019349	-	95	65.517	ENSUAMG00000019780	RBM38	91	65.517	Ursus_americanus
ENSIPUG00000019349	-	95	67.241	ENSVVUG00000017246	RBM38	91	67.241	Vulpes_vulpes
ENSIPUG00000019349	-	92	65.502	ENSXETG00000011268	rbm38	97	67.556	Xenopus_tropicalis
ENSIPUG00000019349	-	74	70.950	ENSXCOG00000017324	-	74	70.950	Xiphophorus_couchianus
ENSIPUG00000019349	-	100	57.600	ENSXMAG00000023662	rbm38	98	58.000	Xiphophorus_maculatus