EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019546 (Gene tree)
Gene ID: 108278406
Gene Symbol: cd3eap
Alias: cd3ap
Full Name: DNA-directed RNA polymerase I subunit RPA34-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 9183 bases
Position: chr17:8254836-8264018
Accession: 108278406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000028873	RNA_polI_A34	PF08208.11	5.8e-39	1	1
ENSIPUP00000028876	RNA_polI_A34	PF08208.11	5.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030052	-	4429	XM_017491757	ENSIPUP00000028876	295 (aa)	XP_017347246	A0A2D0SXK1
ENSIPUT00000030049	-	1173	-	ENSIPUP00000028873	295 (aa)	-	A0A2D0SXK1

Gene Model

Click here to download ENSIPUG00000019546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019546	cd3eap	55	45.198	ENSACLG00000018258	cd3eap	86	39.604	Astatotilapia_calliptera
ENSIPUG00000019546	cd3eap	90	55.109	ENSAMXG00000043778	cd3eap	90	55.474	Astyanax_mexicanus
ENSIPUG00000019546	cd3eap	53	35.669	ENSCPBG00000014383	-	56	35.669	Chrysemys_picta_bellii
ENSIPUG00000019546	cd3eap	53	45.143	ENSCVAG00000000356	cd3eap	50	45.143	Cyprinodon_variegatus
ENSIPUG00000019546	cd3eap	91	46.097	ENSDARG00000090386	cd3eap	98	48.276	Danio_rerio
ENSIPUG00000019546	cd3eap	51	44.720	ENSELUG00000012387	cd3eap	51	44.720	Esox_lucius
ENSIPUG00000019546	cd3eap	81	30.078	ENSGAGG00000016535	-	90	30.466	Gopherus_agassizii
ENSIPUG00000019546	cd3eap	55	45.198	ENSHBUG00000001063	cd3eap	86	39.604	Haplochromis_burtoni
ENSIPUG00000019546	cd3eap	90	36.101	ENSHCOG00000019142	-	86	34.296	Hippocampus_comes
ENSIPUG00000019546	cd3eap	50	52.830	ENSLBEG00000008226	cd3eap	90	41.275	Labrus_bergylta
ENSIPUG00000019546	cd3eap	86	37.597	ENSLOCG00000014803	cd3eap	81	37.209	Lepisosteus_oculatus
ENSIPUG00000019546	cd3eap	55	43.529	ENSORLG00020019155	-	57	43.529	Oryzias_latipes_hni
ENSIPUG00000019546	cd3eap	53	42.941	ENSOMEG00000022922	cd3eap	53	42.941	Oryzias_melastigma
ENSIPUG00000019546	cd3eap	53	46.914	ENSPREG00000018959	-	51	45.714	Poecilia_reticulata
ENSIPUG00000019546	cd3eap	55	45.763	ENSPNYG00000022270	cd3eap	86	39.604	Pundamilia_nyererei
ENSIPUG00000019546	cd3eap	95	59.091	ENSPNAG00000005779	cd3eap	93	60.279	Pygocentrus_nattereri
ENSIPUG00000019546	cd3eap	57	40.462	ENSSFOG00015004233	cd3eap	61	40.462	Scleropages_formosus
ENSIPUG00000019546	cd3eap	51	47.531	ENSSDUG00000001874	cd3eap	87	38.127	Seriola_dumerili
ENSIPUG00000019546	cd3eap	51	48.148	ENSSLDG00000003180	cd3eap	87	39.000	Seriola_lalandi_dorsalis