EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019562 (Gene tree)
Gene ID: 108277141
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 14964 bases
Position: chr16:21798382-21813345
Accession: 108277141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029233	PARP	PF00644.20	1e-33	1	1
ENSIPUP00000029104	PARP	PF00644.20	8.5e-32	1	1
ENSIPUP00000029210	PARP	PF00644.20	5.1e-31	1	1
ENSIPUP00000029178	PARP	PF00644.20	1.4e-29	1	1
ENSIPUP00000029104	RRM_1	PF00076.22	5.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030416	-	954	-	ENSIPUP00000029233	317 (aa)	-	-
ENSIPUT00000030395	-	1062	-	ENSIPUP00000029210	353 (aa)	-	-
ENSIPUT00000030363	-	5040	-	ENSIPUP00000029178	1679 (aa)	-	-
ENSIPUT00000030287	-	7269	XM_017489565	ENSIPUP00000029104	1961 (aa)	XP_017345054	A0A2D0SQS0

Gene Model

Click here to download ENSIPUG00000019562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019562	-	86	30.208	ENSIPUG00000001876	-	59	30.208
ENSIPUG00000019562	-	86	83.714	ENSIPUG00000019762	-	99	83.714
ENSIPUG00000019562	-	64	32.394	ENSIPUG00000009053	PARP11	68	32.394
ENSIPUG00000019562	-	56	35.128	ENSIPUG00000003888	parp9	92	37.500
ENSIPUG00000019562	-	90	46.269	ENSIPUG00000003936	si:ch211-219a4.3	99	34.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019562	-	88	51.667	ENSAPOG00000002274	-	95	51.667	Acanthochromis_polyacanthus
ENSIPUG00000019562	-	56	52.222	ENSACIG00000008604	-	85	53.889	Amphilophus_citrinellus
ENSIPUG00000019562	-	91	56.522	ENSACIG00000014929	-	85	67.407	Amphilophus_citrinellus
ENSIPUG00000019562	-	58	53.763	ENSACIG00000001702	-	92	52.657	Amphilophus_citrinellus
ENSIPUG00000019562	-	71	43.825	ENSACIG00000005931	-	62	72.727	Amphilophus_citrinellus
ENSIPUG00000019562	-	93	62.069	ENSAOCG00000020608	-	99	51.830	Amphiprion_ocellaris
ENSIPUG00000019562	-	85	56.569	ENSAPEG00000022069	-	99	51.398	Amphiprion_percula
ENSIPUG00000019562	-	85	57.706	ENSATEG00000012173	-	98	53.571	Anabas_testudineus
ENSIPUG00000019562	-	86	57.194	ENSACLG00000005600	-	99	55.882	Astatotilapia_calliptera
ENSIPUG00000019562	-	86	55.596	ENSACLG00000005627	-	99	51.036	Astatotilapia_calliptera
ENSIPUG00000019562	-	95	69.737	ENSAMXG00000010091	-	100	66.807	Astyanax_mexicanus
ENSIPUG00000019562	-	87	68.571	ENSAMXG00000031328	-	100	65.517	Astyanax_mexicanus
ENSIPUG00000019562	-	86	56.989	ENSCSEG00000009834	-	100	56.193	Cynoglossus_semilaevis
ENSIPUG00000019562	-	89	64.706	ENSCVAG00000009352	-	99	52.765	Cyprinodon_variegatus
ENSIPUG00000019562	-	65	59.906	ENSCVAG00000000686	-	85	60.377	Cyprinodon_variegatus
ENSIPUG00000019562	-	99	60.309	ENSDARG00000112454	FO744833.2	99	52.872	Danio_rerio
ENSIPUG00000019562	-	80	31.734	ENSDARG00000098398	CABZ01079480.1	53	31.734	Danio_rerio
ENSIPUG00000019562	-	95	39.091	ENSELUG00000004826	-	94	30.667	Esox_lucius
ENSIPUG00000019562	-	95	58.673	ENSELUG00000013643	-	99	55.433	Esox_lucius
ENSIPUG00000019562	-	86	45.487	ENSFHEG00000011780	-	97	45.361	Fundulus_heteroclitus
ENSIPUG00000019562	-	87	32.203	ENSGMOG00000011217	-	99	30.604	Gadus_morhua
ENSIPUG00000019562	-	85	54.412	ENSGAFG00000015867	-	99	54.412	Gambusia_affinis
ENSIPUG00000019562	-	86	56.318	ENSHBUG00000015159	-	99	56.357	Haplochromis_burtoni
ENSIPUG00000019562	-	90	58.841	ENSHBUG00000013327	-	86	65.248	Haplochromis_burtoni
ENSIPUG00000019562	-	86	55.755	ENSHBUG00000015143	-	98	53.261	Haplochromis_burtoni
ENSIPUG00000019562	-	89	60.294	ENSKMAG00000010882	-	93	58.594	Kryptolebias_marmoratus
ENSIPUG00000019562	-	89	66.176	ENSLBEG00000026419	-	99	50.125	Labrus_bergylta
ENSIPUG00000019562	-	92	52.843	ENSMAMG00000018261	-	99	52.843	Mastacembelus_armatus
ENSIPUG00000019562	-	85	55.072	ENSMAMG00000018192	-	97	51.630	Mastacembelus_armatus
ENSIPUG00000019562	-	86	56.318	ENSMZEG00005002038	-	95	52.709	Maylandia_zebra
ENSIPUG00000019562	-	92	59.559	ENSMZEG00005002061	-	99	46.902	Maylandia_zebra
ENSIPUG00000019562	-	92	63.636	ENSMZEG00005027856	-	97	63.636	Maylandia_zebra
ENSIPUG00000019562	-	86	56.884	ENSMZEG00005027852	-	99	53.373	Maylandia_zebra
ENSIPUG00000019562	-	84	56.618	ENSMZEG00005027858	-	99	56.618	Maylandia_zebra
ENSIPUG00000019562	-	87	64.052	ENSMMOG00000010419	-	95	64.052	Mola_mola
ENSIPUG00000019562	-	85	59.928	ENSMALG00000004165	-	96	55.556	Monopterus_albus
ENSIPUG00000019562	-	85	53.455	ENSNBRG00000003116	-	96	53.265	Neolamprologus_brichardi
ENSIPUG00000019562	-	89	56.748	ENSNBRG00000002998	-	99	56.618	Neolamprologus_brichardi
ENSIPUG00000019562	-	99	54.359	ENSONIG00000000234	-	99	52.381	Oreochromis_niloticus
ENSIPUG00000019562	-	86	56.884	ENSONIG00000000241	-	99	54.043	Oreochromis_niloticus
ENSIPUG00000019562	-	89	56.633	ENSORLG00000017386	-	98	47.284	Oryzias_latipes
ENSIPUG00000019562	-	88	64.844	ENSORLG00000017404	-	92	63.816	Oryzias_latipes
ENSIPUG00000019562	-	85	53.091	ENSORLG00020014210	-	99	49.145	Oryzias_latipes_hni
ENSIPUG00000019562	-	92	55.193	ENSORLG00020014046	-	99	57.874	Oryzias_latipes_hni
ENSIPUG00000019562	-	90	55.655	ENSORLG00015004157	-	99	57.874	Oryzias_latipes_hsok
ENSIPUG00000019562	-	91	62.500	ENSORLG00015004253	-	96	52.027	Oryzias_latipes_hsok
ENSIPUG00000019562	-	84	57.455	ENSOMEG00000009413	-	99	57.455	Oryzias_melastigma
ENSIPUG00000019562	-	92	59.412	ENSOMEG00000009483	-	97	60.119	Oryzias_melastigma
ENSIPUG00000019562	-	99	46.226	ENSPKIG00000004064	-	93	38.071	Paramormyrops_kingsleyae
ENSIPUG00000019562	-	85	53.846	ENSPMGG00000011629	-	95	53.846	Periophthalmus_magnuspinnatus
ENSIPUG00000019562	-	97	54.762	ENSPFOG00000015738	-	96	47.767	Poecilia_formosa
ENSIPUG00000019562	-	89	59.146	ENSPLAG00000022742	-	93	62.791	Poecilia_latipinna
ENSIPUG00000019562	-	85	55.636	ENSPMEG00000003192	-	99	54.955	Poecilia_mexicana
ENSIPUG00000019562	-	87	68.590	ENSPREG00000017145	-	99	57.353	Poecilia_reticulata
ENSIPUG00000019562	-	86	55.797	ENSPNYG00000003575	-	99	55.758	Pundamilia_nyererei
ENSIPUG00000019562	-	86	56.318	ENSPNYG00000008208	-	99	56.357	Pundamilia_nyererei
ENSIPUG00000019562	-	83	53.933	ENSPNYG00000023890	-	93	54.286	Pundamilia_nyererei
ENSIPUG00000019562	-	86	51.761	ENSPNYG00000006865	-	99	55.556	Pundamilia_nyererei
ENSIPUG00000019562	-	85	57.971	ENSPNAG00000005029	-	100	57.971	Pygocentrus_nattereri
ENSIPUG00000019562	-	86	67.148	ENSPNAG00000026750	-	93	67.148	Pygocentrus_nattereri
ENSIPUG00000019562	-	91	64.505	ENSPNAG00000004111	-	93	68.015	Pygocentrus_nattereri
ENSIPUG00000019562	-	86	30.556	ENSPNAG00000006111	-	58	30.556	Pygocentrus_nattereri
ENSIPUG00000019562	-	80	40.000	ENSPNAG00000005968	-	96	33.500	Pygocentrus_nattereri
ENSIPUG00000019562	-	84	44.444	ENSSFOG00015019732	-	79	41.060	Scleropages_formosus
ENSIPUG00000019562	-	93	62.595	ENSSFOG00015006999	-	98	44.288	Scleropages_formosus
ENSIPUG00000019562	-	95	58.974	ENSSMAG00000016922	-	99	63.590	Scophthalmus_maximus
ENSIPUG00000019562	-	91	60.513	ENSSDUG00000013560	-	99	55.807	Seriola_dumerili
ENSIPUG00000019562	-	91	56.902	ENSSLDG00000011620	-	99	56.902	Seriola_lalandi_dorsalis
ENSIPUG00000019562	-	90	58.663	ENSSPAG00000014708	-	93	63.452	Stegastes_partitus
ENSIPUG00000019562	-	93	56.122	ENSTRUG00000003423	-	98	40.919	Takifugu_rubripes
ENSIPUG00000019562	-	84	50.368	ENSTRUG00000010891	-	99	50.368	Takifugu_rubripes
ENSIPUG00000019562	-	87	55.914	ENSTNIG00000018877	-	99	50.980	Tetraodon_nigroviridis
ENSIPUG00000019562	-	81	70.149	ENSXCOG00000012535	-	99	56.250	Xiphophorus_couchianus
ENSIPUG00000019562	-	89	58.967	ENSXMAG00000015158	-	98	62.791	Xiphophorus_maculatus