EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019614 (Gene tree)
Gene ID: 108261082
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: RANBP2-like and GRIP domain-containing protein 5/6
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 41557 bases
Position: chrKV453363.1:143712-185268
Accession: 108261082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029067	zf-RanBP	PF00641.18	8.9e-40	1	5
ENSIPUP00000029067	zf-RanBP	PF00641.18	8.9e-40	2	5
ENSIPUP00000029067	zf-RanBP	PF00641.18	8.9e-40	3	5
ENSIPUP00000029067	zf-RanBP	PF00641.18	8.9e-40	4	5
ENSIPUP00000029067	zf-RanBP	PF00641.18	8.9e-40	5	5
ENSIPUP00000028986	zf-RanBP	PF00641.18	1e-39	1	5
ENSIPUP00000028986	zf-RanBP	PF00641.18	1e-39	2	5
ENSIPUP00000028986	zf-RanBP	PF00641.18	1e-39	3	5
ENSIPUP00000028986	zf-RanBP	PF00641.18	1e-39	4	5
ENSIPUP00000028986	zf-RanBP	PF00641.18	1e-39	5	5
ENSIPUP00000029029	zf-RanBP	PF00641.18	1.4e-39	1	5
ENSIPUP00000029029	zf-RanBP	PF00641.18	1.4e-39	2	5
ENSIPUP00000029029	zf-RanBP	PF00641.18	1.4e-39	3	5
ENSIPUP00000029029	zf-RanBP	PF00641.18	1.4e-39	4	5
ENSIPUP00000029029	zf-RanBP	PF00641.18	1.4e-39	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030168	-	13903	-	ENSIPUP00000028986	2849 (aa)	-	-
ENSIPUT00000030210	-	13178	XM_017461944	ENSIPUP00000029029	3016 (aa)	XP_017317433	A0A2D0QFI3
ENSIPUT00000030248	-	8987	-	ENSIPUP00000029067	2760 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000019614's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019614's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.709	ENSG00000153201	RANBP2	90	73.913	Homo_sapiens
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.738	ENSAPOG00000017146	si:ch1073-55a19.2	100	57.533	Acanthochromis_polyacanthus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.632	ENSAMEG00000013078	RANBP2	75	52.301	Ailuropoda_melanoleuca
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.808	ENSACIG00000001203	si:ch1073-55a19.2	100	57.660	Amphilophus_citrinellus
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.967	ENSAPEG00000012495	si:ch1073-55a19.2	100	57.745	Amphiprion_percula
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.401	ENSATEG00000001716	si:ch1073-55a19.2	100	57.475	Anabas_testudineus
ENSIPUG00000019614	si:ch1073-55a19.2	98	58.156	ENSACAG00000002091	RANBP2	99	58.156	Anolis_carolinensis
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.217	ENSANAG00000023124	RANBP2	98	56.465	Aotus_nancymaae
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.876	ENSACLG00000020500	si:ch1073-55a19.2	100	57.313	Astatotilapia_calliptera
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.447	ENSBTAG00000000152	RANBP2	100	48.333	Bos_taurus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.258	ENSCJAG00000001189	RANBP2	90	69.288	Callithrix_jacchus
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.030	ENSCAFG00000023061	RANBP2	99	51.520	Canis_familiaris
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.519	ENSCAFG00020009314	RANBP2	99	52.861	Canis_lupus_dingo
ENSIPUG00000019614	si:ch1073-55a19.2	99	50.583	ENSCHIG00000012686	RANBP2	100	48.717	Capra_hircus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.217	ENSTSYG00000001656	RANBP2	99	51.653	Carlito_syrichta
ENSIPUG00000019614	si:ch1073-55a19.2	98	58.519	ENSCAPG00000010687	RANBP2	100	50.602	Cavia_aperea
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.980	ENSCPOG00000000392	RANBP2	100	48.728	Cavia_porcellus
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.155	ENSCCAG00000028166	RANBP2	94	69.403	Cebus_capucinus
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSCATG00000032597	RANBP2	100	53.994	Cercocebus_atys
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.475	ENSCLAG00000010533	RANBP2	100	49.677	Chinchilla_lanigera
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSCSAG00000017019	RANBP2	100	56.269	Chlorocebus_sabaeus
ENSIPUG00000019614	si:ch1073-55a19.2	65	64.500	ENSCHOG00000012659	-	56	64.500	Choloepus_hoffmanni
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.503	ENSCPBG00000006985	RANBP2	100	50.139	Chrysemys_picta_bellii
ENSIPUG00000019614	si:ch1073-55a19.2	96	53.788	ENSCANG00000041469	RANBP2	99	50.629	Colobus_angolensis_palliatus
ENSIPUG00000019614	si:ch1073-55a19.2	99	50.246	ENSCGRG00001000642	Ranbp2	96	63.518	Cricetulus_griseus_chok1gshd
ENSIPUG00000019614	si:ch1073-55a19.2	99	50.246	ENSCGRG00000008995	Ranbp2	96	63.518	Cricetulus_griseus_crigri
ENSIPUG00000019614	si:ch1073-55a19.2	100	54.257	ENSCSEG00000013280	si:ch1073-55a19.2	100	52.602	Cynoglossus_semilaevis
ENSIPUG00000019614	si:ch1073-55a19.2	99	56.537	ENSCVAG00000016050	si:ch1073-55a19.2	100	54.131	Cyprinodon_variegatus
ENSIPUG00000019614	si:ch1073-55a19.2	100	54.298	ENSDARG00000093125	RANBP2	99	62.224	Danio_rerio
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.475	ENSDNOG00000040501	RANBP2	99	49.799	Dasypus_novemcinctus
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.237	ENSDORG00000002206	Ranbp2	100	53.237	Dipodomys_ordii
ENSIPUG00000019614	si:ch1073-55a19.2	71	63.462	ENSETEG00000008891	-	61	63.462	Echinops_telfairi
ENSIPUG00000019614	si:ch1073-55a19.2	96	55.989	ENSEBUG00000010057	si:ch1073-55a19.2	83	55.526	Eptatretus_burgeri
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.030	ENSEASG00005012918	RANBP2	99	52.672	Equus_asinus_asinus
ENSIPUG00000019614	si:ch1073-55a19.2	98	58.519	ENSECAG00000008458	RANBP2	95	55.802	Equus_caballus
ENSIPUG00000019614	si:ch1073-55a19.2	62	64.623	ENSEEUG00000007806	RANBP2	79	64.623	Erinaceus_europaeus
ENSIPUG00000019614	si:ch1073-55a19.2	99	66.587	ENSELUG00000007763	si:ch1073-55a19.2	94	66.667	Esox_lucius
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.143	ENSFALG00000003519	RANBP2	99	52.580	Ficedula_albicollis
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.736	ENSFDAG00000016912	RANBP2	99	50.832	Fukomys_damarensis
ENSIPUG00000019614	si:ch1073-55a19.2	100	55.741	ENSFHEG00000009774	si:ch1073-55a19.2	100	55.581	Fundulus_heteroclitus
ENSIPUG00000019614	si:ch1073-55a19.2	99	71.429	ENSGMOG00000007071	si:ch1073-55a19.2	94	71.429	Gadus_morhua
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.895	ENSGAFG00000010966	si:ch1073-55a19.2	100	56.689	Gambusia_affinis
ENSIPUG00000019614	si:ch1073-55a19.2	100	56.352	ENSGACG00000006831	si:ch1073-55a19.2	100	55.965	Gasterosteus_aculeatus
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.333	ENSGAGG00000025039	RANBP2	99	52.273	Gopherus_agassizii
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.160	ENSHBUG00000000053	si:ch1073-55a19.2	100	57.134	Haplochromis_burtoni
ENSIPUG00000019614	si:ch1073-55a19.2	96	57.778	ENSHGLG00000018887	RANBP2	86	71.765	Heterocephalus_glaber_female
ENSIPUG00000019614	si:ch1073-55a19.2	96	57.778	ENSHGLG00100007365	RANBP2	86	71.765	Heterocephalus_glaber_male
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.357	ENSHCOG00000019596	si:ch1073-55a19.2	100	57.727	Hippocampus_comes
ENSIPUG00000019614	si:ch1073-55a19.2	99	59.259	ENSSTOG00000019518	RANBP2	99	50.299	Ictidomys_tridecemlineatus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.970	ENSJJAG00000021292	Ranbp2	100	49.236	Jaculus_jaculus
ENSIPUG00000019614	si:ch1073-55a19.2	100	56.898	ENSKMAG00000001158	si:ch1073-55a19.2	100	57.040	Kryptolebias_marmoratus
ENSIPUG00000019614	si:ch1073-55a19.2	99	56.616	ENSLBEG00000027979	si:ch1073-55a19.2	99	58.856	Labrus_bergylta
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.426	ENSLACG00000009728	RANBP2	99	53.213	Latimeria_chalumnae
ENSIPUG00000019614	si:ch1073-55a19.2	98	68.321	ENSLOCG00000010333	si:ch1073-55a19.2	100	55.439	Lepisosteus_oculatus
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.220	ENSLAFG00000000740	RANBP2	100	48.737	Loxodonta_africana
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSMFAG00000029029	RANBP2	100	57.450	Macaca_fascicularis
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSMMUG00000021019	RANBP2	100	57.527	Macaca_mulatta
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSMNEG00000043706	RANBP2	100	57.450	Macaca_nemestrina
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSMLEG00000037350	RANBP2	100	57.450	Mandrillus_leucophaeus
ENSIPUG00000019614	si:ch1073-55a19.2	100	59.723	ENSMAMG00000017900	si:ch1073-55a19.2	100	58.922	Mastacembelus_armatus
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.876	ENSMZEG00005010956	si:ch1073-55a19.2	100	57.345	Maylandia_zebra
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.415	ENSMGAG00000014831	-	99	47.901	Meleagris_gallopavo
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.724	ENSMAUG00000013313	Ranbp2	100	48.556	Mesocricetus_auratus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.217	ENSMICG00000011864	RANBP2	94	53.038	Microcebus_murinus
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.724	ENSMOCG00000012516	Ranbp2	95	63.430	Microtus_ochrogaster
ENSIPUG00000019614	si:ch1073-55a19.2	100	59.144	ENSMMOG00000005743	si:ch1073-55a19.2	100	58.908	Mola_mola
ENSIPUG00000019614	si:ch1073-55a19.2	97	53.846	ENSMODG00000002914	RANBP2	100	53.846	Monodelphis_domestica
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.258	ENSMALG00000004359	si:ch1073-55a19.2	100	57.748	Monopterus_albus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.103	ENSMUSG00000003226	Ranbp2	100	49.677	Mus_musculus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.220	MGP_PahariEiJ_G0030751	Ranbp2	100	48.885	Mus_pahari
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.103	MGP_SPRETEiJ_G0016147	Ranbp2	100	49.677	Mus_spretus
ENSIPUG00000019614	si:ch1073-55a19.2	99	55.319	ENSMPUG00000010754	RANBP2	100	51.420	Mustela_putorius_furo
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.709	ENSMLUG00000005555	RANBP2	64	56.759	Myotis_lucifugus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.709	ENSNGAG00000016154	Ranbp2	100	48.950	Nannospalax_galili
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.794	ENSNBRG00000004587	si:ch1073-55a19.2	100	57.363	Neolamprologus_brichardi
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.788	ENSNLEG00000007501	RANBP2	99	57.731	Nomascus_leucogenys
ENSIPUG00000019614	si:ch1073-55a19.2	93	55.178	ENSOPRG00000009720	-	94	55.178	Ochotona_princeps
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.156	ENSODEG00000013212	RANBP2	99	58.156	Octodon_degus
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.005	ENSONIG00000004346	si:ch1073-55a19.2	100	57.013	Oreochromis_niloticus
ENSIPUG00000019614	si:ch1073-55a19.2	78	52.281	ENSOANG00000004894	RANBP2	100	48.984	Ornithorhynchus_anatinus
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.202	ENSOCUG00000001165	RANBP2	99	56.738	Oryctolagus_cuniculus
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.095	ENSORLG00000015523	si:ch1073-55a19.2	100	56.955	Oryzias_latipes
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.857	ENSORLG00020003797	si:ch1073-55a19.2	100	58.260	Oryzias_latipes_hni
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.363	ENSORLG00015004994	si:ch1073-55a19.2	100	58.197	Oryzias_latipes_hsok
ENSIPUG00000019614	si:ch1073-55a19.2	95	62.680	ENSOMEG00000022969	si:ch1073-55a19.2	100	58.221	Oryzias_melastigma
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.202	ENSOGAG00000028976	RANBP2	55	51.688	Otolemur_garnettii
ENSIPUG00000019614	si:ch1073-55a19.2	96	57.447	ENSOARG00000000558	RANBP2	98	57.447	Ovis_aries
ENSIPUG00000019614	si:ch1073-55a19.2	99	53.030	ENSPANG00000000990	RANBP2	100	49.673	Papio_anubis
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.049	ENSPKIG00000010971	RANBP2	100	67.083	Paramormyrops_kingsleyae
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.153	ENSPKIG00000021054	-	99	54.167	Paramormyrops_kingsleyae
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.217	ENSPSIG00000007182	RANBP2	99	49.829	Pelodiscus_sinensis
ENSIPUG00000019614	si:ch1073-55a19.2	93	52.709	ENSPEMG00000021565	Ranbp2	98	50.470	Peromyscus_maniculatus_bairdii
ENSIPUG00000019614	si:ch1073-55a19.2	89	57.516	ENSPMAG00000007195	si:ch1073-55a19.2	96	71.111	Petromyzon_marinus
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.519	ENSPCIG00000013912	RANBP2	97	57.353	Phascolarctos_cinereus
ENSIPUG00000019614	si:ch1073-55a19.2	55	56.837	ENSPFOG00000007377	si:ch1073-55a19.2	100	56.305	Poecilia_formosa
ENSIPUG00000019614	si:ch1073-55a19.2	99	56.599	ENSPLAG00000012373	si:ch1073-55a19.2	100	56.173	Poecilia_latipinna
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.543	ENSPMEG00000005561	si:ch1073-55a19.2	100	56.421	Poecilia_mexicana
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.587	ENSPREG00000013331	si:ch1073-55a19.2	100	56.341	Poecilia_reticulata
ENSIPUG00000019614	si:ch1073-55a19.2	69	53.030	ENSPPYG00000012139	-	93	57.395	Pongo_abelii
ENSIPUG00000019614	si:ch1073-55a19.2	97	64.824	ENSPCAG00000000957	RANBP2	95	70.881	Procavia_capensis
ENSIPUG00000019614	si:ch1073-55a19.2	99	51.930	ENSPCOG00000008879	RANBP2	99	50.256	Propithecus_coquereli
ENSIPUG00000019614	si:ch1073-55a19.2	95	53.294	ENSPVAG00000003883	RANBP2	93	53.740	Pteropus_vampyrus
ENSIPUG00000019614	si:ch1073-55a19.2	99	57.637	ENSPNYG00000015971	si:ch1073-55a19.2	100	57.134	Pundamilia_nyererei
ENSIPUG00000019614	si:ch1073-55a19.2	99	72.750	ENSPNAG00000026129	si:ch1073-55a19.2	100	69.542	Pygocentrus_nattereri
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.857	ENSRNOG00000000796	Ranbp2	100	48.901	Rattus_norvegicus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.273	ENSRBIG00000043515	RANBP2	99	53.127	Rhinopithecus_bieti
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.273	ENSRROG00000026113	RANBP2	99	56.184	Rhinopithecus_roxellana
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.037	ENSSBOG00000035336	RANBP2	98	57.308	Saimiri_boliviensis_boliviensis
ENSIPUG00000019614	si:ch1073-55a19.2	96	58.519	ENSSHAG00000004676	RANBP2	99	50.680	Sarcophilus_harrisii
ENSIPUG00000019614	si:ch1073-55a19.2	99	59.721	ENSSFOG00015003943	-	99	59.661	Scleropages_formosus
ENSIPUG00000019614	si:ch1073-55a19.2	100	56.661	ENSSFOG00015023201	RANBP2	100	57.775	Scleropages_formosus
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.157	ENSSMAG00000007331	si:ch1073-55a19.2	100	58.083	Scophthalmus_maximus
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.161	ENSSDUG00000013160	si:ch1073-55a19.2	100	59.070	Seriola_dumerili
ENSIPUG00000019614	si:ch1073-55a19.2	100	57.757	ENSSLDG00000023392	si:ch1073-55a19.2	100	60.164	Seriola_lalandi_dorsalis
ENSIPUG00000019614	si:ch1073-55a19.2	87	66.270	ENSSARG00000005595	RANBP2	69	66.270	Sorex_araneus
ENSIPUG00000019614	si:ch1073-55a19.2	100	58.673	ENSSPAG00000008000	si:ch1073-55a19.2	100	61.500	Stegastes_partitus
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.217	ENSSSCG00000008136	RANBP2	93	52.874	Sus_scrofa
ENSIPUG00000019614	si:ch1073-55a19.2	99	52.857	ENSTGUG00000009571	RANBP2	100	52.857	Taeniopygia_guttata
ENSIPUG00000019614	si:ch1073-55a19.2	94	53.241	ENSTTRG00000007400	RANBP2	96	53.241	Tursiops_truncatus
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSUAMG00000020025	RANBP2	97	52.607	Ursus_americanus
ENSIPUG00000019614	si:ch1073-55a19.2	96	64.359	ENSVPAG00000006676	RANBP2	87	64.359	Vicugna_pacos
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.519	ENSVVUG00000014899	RANBP2	98	52.786	Vulpes_vulpes
ENSIPUG00000019614	si:ch1073-55a19.2	99	50.196	ENSXETG00000016006	ranbp2	96	54.396	Xenopus_tropicalis
ENSIPUG00000019614	si:ch1073-55a19.2	99	56.472	ENSXCOG00000000752	si:ch1073-55a19.2	99	55.347	Xiphophorus_couchianus
ENSIPUG00000019614	si:ch1073-55a19.2	99	58.302	ENSXMAG00000003519	si:ch1073-55a19.2	100	56.878	Xiphophorus_maculatus