EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019672 (Gene tree)
Gene ID: 108280536
Gene Symbol: sbno2
Alias: sb:eu274
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 30832 bases
Position: chr20:17705397-17736228
Accession: 108280536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029209	ResIII	PF04851.15	4.6e-07	1	1
ENSIPUP00000029112	ResIII	PF04851.15	6.7e-07	1	1
ENSIPUP00000029088	ResIII	PF04851.15	6.8e-07	1	1
ENSIPUP00000029135	ResIII	PF04851.15	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030319	-	9231	XM_017495624	ENSIPUP00000029135	1607 (aa)	XP_017351113	A0A2D0T8A1
ENSIPUT00000030295	-	9075	-	ENSIPUP00000029112	1581 (aa)	-	-
ENSIPUT00000030394	-	3018	-	ENSIPUP00000029209	1005 (aa)	-	-
ENSIPUT00000030270	-	9198	XM_017495623	ENSIPUP00000029088	1607 (aa)	XP_017351112	A0A2D0T8A1

Gene Model

Click here to download ENSIPUG00000019672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019672	sbno2	99	74.658	ENSIPUG00000000537	si:ch73-63e15.2	85	77.408
ENSIPUG00000019672	sbno2	76	66.591	ENSIPUG00000015830	Sbno1	69	66.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019672	sbno2	93	69.958	ENSG00000064932	SBNO2	87	67.331	Homo_sapiens
ENSIPUG00000019672	sbno2	99	77.878	ENSAPOG00000003185	si:ch73-63e15.2	95	73.802	Acanthochromis_polyacanthus
ENSIPUG00000019672	sbno2	99	78.895	ENSAOCG00000016581	si:ch73-63e15.2	99	78.895	Amphiprion_ocellaris
ENSIPUG00000019672	sbno2	99	77.606	ENSAPEG00000008862	si:ch73-63e15.2	77	82.045	Amphiprion_percula
ENSIPUG00000019672	sbno2	99	79.559	ENSATEG00000023838	si:ch73-63e15.2	99	78.758	Anabas_testudineus
ENSIPUG00000019672	sbno2	92	72.981	ENSAPLG00000007158	SBNO2	96	66.641	Anas_platyrhynchos
ENSIPUG00000019672	sbno2	93	70.062	ENSANAG00000026685	SBNO2	88	67.331	Aotus_nancymaae
ENSIPUG00000019672	sbno2	99	75.749	ENSACLG00000005090	si:ch73-63e15.2	99	64.764	Astatotilapia_calliptera
ENSIPUG00000019672	sbno2	99	75.241	ENSAMXG00000015881	si:ch73-63e15.2	93	73.047	Astyanax_mexicanus
ENSIPUG00000019672	sbno2	99	83.836	ENSAMXG00000018868	sbno2a	99	84.180	Astyanax_mexicanus
ENSIPUG00000019672	sbno2	93	70.539	ENSBTAG00000020780	SBNO2	87	68.278	Bos_taurus
ENSIPUG00000019672	sbno2	93	70.820	ENSCAFG00000019543	SBNO2	90	64.178	Canis_familiaris
ENSIPUG00000019672	sbno2	93	70.820	ENSCAFG00020017115	SBNO2	96	64.178	Canis_lupus_dingo
ENSIPUG00000019672	sbno2	93	70.509	ENSCHIG00000026127	SBNO2	85	68.278	Capra_hircus
ENSIPUG00000019672	sbno2	99	65.800	ENSCAPG00000005731	SBNO2	99	62.213	Cavia_aperea
ENSIPUG00000019672	sbno2	99	65.800	ENSCPOG00000007477	SBNO2	92	62.175	Cavia_porcellus
ENSIPUG00000019672	sbno2	93	70.062	ENSCCAG00000037518	SBNO2	89	66.867	Cebus_capucinus
ENSIPUG00000019672	sbno2	93	70.301	ENSCATG00000037046	SBNO2	87	67.418	Cercocebus_atys
ENSIPUG00000019672	sbno2	98	67.615	ENSCLAG00000010178	SBNO2	98	67.580	Chinchilla_lanigera
ENSIPUG00000019672	sbno2	93	70.197	ENSCSAG00000012317	SBNO2	90	63.701	Chlorocebus_sabaeus
ENSIPUG00000019672	sbno2	93	72.953	ENSCPBG00000008920	SBNO2	89	72.512	Chrysemys_picta_bellii
ENSIPUG00000019672	sbno2	93	69.835	ENSCANG00000036745	SBNO2	95	66.968	Colobus_angolensis_palliatus
ENSIPUG00000019672	sbno2	92	69.615	ENSCGRG00001023960	Sbno2	89	63.930	Cricetulus_griseus_chok1gshd
ENSIPUG00000019672	sbno2	92	71.102	ENSCGRG00000011984	Sbno2	89	65.174	Cricetulus_griseus_crigri
ENSIPUG00000019672	sbno2	93	79.171	ENSCSEG00000006856	si:ch73-63e15.2	95	81.776	Cynoglossus_semilaevis
ENSIPUG00000019672	sbno2	99	76.522	ENSCVAG00000005663	si:ch73-63e15.2	91	71.264	Cyprinodon_variegatus
ENSIPUG00000019672	sbno2	99	81.765	ENSDARG00000098801	sbno2a	99	80.147	Danio_rerio
ENSIPUG00000019672	sbno2	99	73.475	ENSDARG00000016188	SBNO2	91	71.855	Danio_rerio
ENSIPUG00000019672	sbno2	93	70.656	ENSDORG00000002916	Sbno2	90	64.984	Dipodomys_ordii
ENSIPUG00000019672	sbno2	96	68.712	ENSEASG00005021621	SBNO2	87	68.717	Equus_asinus_asinus
ENSIPUG00000019672	sbno2	96	68.712	ENSECAG00000011827	SBNO2	87	68.805	Equus_caballus
ENSIPUG00000019672	sbno2	99	76.091	ENSELUG00000020457	si:ch73-63e15.2	91	75.281	Esox_lucius
ENSIPUG00000019672	sbno2	93	72.614	ENSFALG00000013988	SBNO2	92	65.204	Ficedula_albicollis
ENSIPUG00000019672	sbno2	92	67.675	ENSFDAG00000015186	SBNO2	87	64.851	Fukomys_damarensis
ENSIPUG00000019672	sbno2	99	77.005	ENSFHEG00000022262	si:ch73-63e15.2	79	77.920	Fundulus_heteroclitus
ENSIPUG00000019672	sbno2	92	80.021	ENSGMOG00000007542	si:ch73-63e15.2	96	80.769	Gadus_morhua
ENSIPUG00000019672	sbno2	95	71.544	ENSGALG00000037522	SBNO2	89	67.329	Gallus_gallus
ENSIPUG00000019672	sbno2	99	78.803	ENSGAFG00000004860	si:ch73-63e15.2	91	81.299	Gambusia_affinis
ENSIPUG00000019672	sbno2	92	81.197	ENSGACG00000013190	si:ch73-63e15.2	96	81.018	Gasterosteus_aculeatus
ENSIPUG00000019672	sbno2	93	73.745	ENSGAGG00000008348	SBNO2	86	71.256	Gopherus_agassizii
ENSIPUG00000019672	sbno2	99	75.556	ENSHBUG00000010742	si:ch73-63e15.2	99	65.855	Haplochromis_burtoni
ENSIPUG00000019672	sbno2	92	70.073	ENSHGLG00000008739	SBNO2	90	64.007	Heterocephalus_glaber_female
ENSIPUG00000019672	sbno2	92	70.073	ENSHGLG00100005269	SBNO2	98	67.370	Heterocephalus_glaber_male
ENSIPUG00000019672	sbno2	99	77.712	ENSHCOG00000000884	si:ch73-63e15.2	86	81.429	Hippocampus_comes
ENSIPUG00000019672	sbno2	82	74.320	ENSSTOG00000025832	SBNO2	90	64.257	Ictidomys_tridecemlineatus
ENSIPUG00000019672	sbno2	96	64.264	ENSJJAG00000017397	Sbno2	89	62.655	Jaculus_jaculus
ENSIPUG00000019672	sbno2	99	75.942	ENSKMAG00000005541	si:ch73-63e15.2	79	79.216	Kryptolebias_marmoratus
ENSIPUG00000019672	sbno2	99	79.125	ENSLBEG00000025016	si:ch73-63e15.2	99	79.225	Labrus_bergylta
ENSIPUG00000019672	sbno2	62	72.973	ENSLBEG00000005937	-	99	73.780	Labrus_bergylta
ENSIPUG00000019672	sbno2	54	77.076	ENSLACG00000012598	SBNO2	99	70.549	Latimeria_chalumnae
ENSIPUG00000019672	sbno2	99	77.906	ENSLOCG00000004643	si:ch73-63e15.2	90	78.543	Lepisosteus_oculatus
ENSIPUG00000019672	sbno2	91	69.206	ENSLAFG00000008824	SBNO2	89	64.060	Loxodonta_africana
ENSIPUG00000019672	sbno2	93	68.672	ENSMFAG00000040030	SBNO2	89	65.887	Macaca_fascicularis
ENSIPUG00000019672	sbno2	93	70.301	ENSMMUG00000010886	SBNO2	90	63.781	Macaca_mulatta
ENSIPUG00000019672	sbno2	93	70.301	ENSMNEG00000039927	SBNO2	87	67.504	Macaca_nemestrina
ENSIPUG00000019672	sbno2	93	70.301	ENSMLEG00000038556	SBNO2	98	64.133	Mandrillus_leucophaeus
ENSIPUG00000019672	sbno2	99	76.715	ENSMAMG00000018758	si:ch73-63e15.2	77	80.427	Mastacembelus_armatus
ENSIPUG00000019672	sbno2	99	75.749	ENSMZEG00005010682	si:ch73-63e15.2	99	64.586	Maylandia_zebra
ENSIPUG00000019672	sbno2	95	70.683	ENSMGAG00000003801	SBNO2	89	70.095	Meleagris_gallopavo
ENSIPUG00000019672	sbno2	93	70.894	ENSMAUG00000008034	Sbno2	89	65.394	Mesocricetus_auratus
ENSIPUG00000019672	sbno2	93	70.166	ENSMICG00000013071	SBNO2	88	67.474	Microcebus_murinus
ENSIPUG00000019672	sbno2	93	70.674	ENSMOCG00000010504	Sbno2	88	65.563	Microtus_ochrogaster
ENSIPUG00000019672	sbno2	97	69.990	ENSMODG00000005382	SBNO2	89	64.890	Monodelphis_domestica
ENSIPUG00000019672	sbno2	99	72.645	ENSMALG00000021831	si:ch73-63e15.2	97	76.584	Monopterus_albus
ENSIPUG00000019672	sbno2	93	70.374	ENSMUSG00000035673	Sbno2	93	67.128	Mus_musculus
ENSIPUG00000019672	sbno2	93	70.478	MGP_PahariEiJ_G0030976	Sbno2	85	67.215	Mus_pahari
ENSIPUG00000019672	sbno2	93	70.478	MGP_SPRETEiJ_G0016381	Sbno2	90	67.301	Mus_spretus
ENSIPUG00000019672	sbno2	93	70.790	ENSMPUG00000008747	SBNO2	91	69.949	Mustela_putorius_furo
ENSIPUG00000019672	sbno2	93	68.847	ENSNGAG00000004308	Sbno2	90	64.339	Nannospalax_galili
ENSIPUG00000019672	sbno2	92	79.219	ENSNBRG00000022968	si:ch73-63e15.2	93	84.940	Neolamprologus_brichardi
ENSIPUG00000019672	sbno2	87	76.395	ENSNLEG00000001305	SBNO2	89	67.221	Nomascus_leucogenys
ENSIPUG00000019672	sbno2	76	68.293	ENSMEUG00000013511	-	78	65.180	Notamacropus_eugenii
ENSIPUG00000019672	sbno2	92	69.979	ENSOPRG00000017238	SBNO2	93	66.959	Ochotona_princeps
ENSIPUG00000019672	sbno2	97	66.799	ENSODEG00000011822	SBNO2	90	63.136	Octodon_degus
ENSIPUG00000019672	sbno2	99	75.427	ENSONIG00000002490	si:ch73-63e15.2	99	75.848	Oreochromis_niloticus
ENSIPUG00000019672	sbno2	99	75.071	ENSORLG00000000913	si:ch73-63e15.2	77	82.379	Oryzias_latipes
ENSIPUG00000019672	sbno2	99	76.008	ENSORLG00020010978	si:ch73-63e15.2	78	80.136	Oryzias_latipes_hni
ENSIPUG00000019672	sbno2	99	75.141	ENSORLG00015000202	si:ch73-63e15.2	77	82.558	Oryzias_latipes_hsok
ENSIPUG00000019672	sbno2	99	75.912	ENSOMEG00000000359	si:ch73-63e15.2	79	78.194	Oryzias_melastigma
ENSIPUG00000019672	sbno2	93	69.367	ENSOARG00000011130	SBNO2	93	62.256	Ovis_aries
ENSIPUG00000019672	sbno2	93	69.854	ENSPPAG00000032482	SBNO2	89	66.409	Pan_paniscus
ENSIPUG00000019672	sbno2	93	69.958	ENSPTRG00000010185	SBNO2	89	66.440	Pan_troglodytes
ENSIPUG00000019672	sbno2	93	66.044	ENSPANG00000009658	SBNO2	90	60.524	Papio_anubis
ENSIPUG00000019672	sbno2	99	75.430	ENSPKIG00000024201	si:ch73-63e15.2	87	78.037	Paramormyrops_kingsleyae
ENSIPUG00000019672	sbno2	99	73.062	ENSPKIG00000009707	-	83	79.063	Paramormyrops_kingsleyae
ENSIPUG00000019672	sbno2	92	71.591	ENSPSIG00000002852	SBNO2	99	71.154	Pelodiscus_sinensis
ENSIPUG00000019672	sbno2	99	78.257	ENSPMGG00000014375	si:ch73-63e15.2	93	74.059	Periophthalmus_magnuspinnatus
ENSIPUG00000019672	sbno2	93	68.520	ENSPEMG00000024122	Sbno2	89	64.053	Peromyscus_maniculatus_bairdii
ENSIPUG00000019672	sbno2	88	74.396	ENSPCIG00000011264	SBNO2	89	66.613	Phascolarctos_cinereus
ENSIPUG00000019672	sbno2	99	75.262	ENSPFOG00000004096	si:ch73-63e15.2	100	79.588	Poecilia_formosa
ENSIPUG00000019672	sbno2	93	81.118	ENSPLAG00000014653	si:ch73-63e15.2	80	77.859	Poecilia_latipinna
ENSIPUG00000019672	sbno2	99	79.125	ENSPMEG00000002129	si:ch73-63e15.2	97	79.225	Poecilia_mexicana
ENSIPUG00000019672	sbno2	99	75.310	ENSPREG00000006755	si:ch73-63e15.2	80	76.320	Poecilia_reticulata
ENSIPUG00000019672	sbno2	82	73.031	ENSPCAG00000012256	SBNO2	77	68.690	Procavia_capensis
ENSIPUG00000019672	sbno2	97	60.413	ENSPCOG00000015216	SBNO2	88	61.446	Propithecus_coquereli
ENSIPUG00000019672	sbno2	99	75.749	ENSPNYG00000019926	si:ch73-63e15.2	99	66.026	Pundamilia_nyererei
ENSIPUG00000019672	sbno2	99	84.810	ENSPNAG00000026609	sbno2a	100	77.602	Pygocentrus_nattereri
ENSIPUG00000019672	sbno2	99	75.965	ENSPNAG00000020260	si:ch73-63e15.2	84	79.352	Pygocentrus_nattereri
ENSIPUG00000019672	sbno2	93	70.582	ENSRNOG00000013987	Sbno2	88	67.680	Rattus_norvegicus
ENSIPUG00000019672	sbno2	93	69.038	ENSRBIG00000009740	SBNO2	86	66.952	Rhinopithecus_bieti
ENSIPUG00000019672	sbno2	79	71.376	ENSRROG00000044671	SBNO2	84	70.631	Rhinopithecus_roxellana
ENSIPUG00000019672	sbno2	93	70.062	ENSSBOG00000023562	SBNO2	88	67.244	Saimiri_boliviensis_boliviensis
ENSIPUG00000019672	sbno2	92	71.979	ENSSHAG00000010241	SBNO2	98	68.103	Sarcophilus_harrisii
ENSIPUG00000019672	sbno2	92	80.317	ENSSFOG00015005861	si:ch73-63e15.2	94	79.740	Scleropages_formosus
ENSIPUG00000019672	sbno2	99	77.124	ENSSMAG00000012489	si:ch73-63e15.2	61	82.623	Scophthalmus_maximus
ENSIPUG00000019672	sbno2	99	77.005	ENSSDUG00000003527	si:ch73-63e15.2	75	80.357	Seriola_dumerili
ENSIPUG00000019672	sbno2	99	77.124	ENSSLDG00000004623	si:ch73-63e15.2	74	81.109	Seriola_lalandi_dorsalis
ENSIPUG00000019672	sbno2	92	83.621	ENSSPAG00000017717	si:ch73-63e15.2	76	82.214	Stegastes_partitus
ENSIPUG00000019672	sbno2	93	70.924	ENSSSCG00000030042	SBNO2	89	68.361	Sus_scrofa
ENSIPUG00000019672	sbno2	92	81.303	ENSTRUG00000018193	si:ch73-63e15.2	86	81.347	Takifugu_rubripes
ENSIPUG00000019672	sbno2	50	87.475	ENSTNIG00000000856	si:ch73-63e15.2	97	87.327	Tetraodon_nigroviridis
ENSIPUG00000019672	sbno2	93	70.613	ENSUAMG00000006568	SBNO2	93	71.561	Ursus_americanus
ENSIPUG00000019672	sbno2	93	70.820	ENSVVUG00000022823	SBNO2	89	64.308	Vulpes_vulpes
ENSIPUG00000019672	sbno2	82	76.353	ENSXETG00000021579	sbno2	91	74.699	Xenopus_tropicalis
ENSIPUG00000019672	sbno2	93	81.654	ENSXCOG00000009209	si:ch73-63e15.2	88	85.763	Xiphophorus_couchianus
ENSIPUG00000019672	sbno2	99	76.782	ENSXMAG00000012091	si:ch73-63e15.2	85	83.719	Xiphophorus_maculatus