EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019762 (Gene tree)
Gene ID: 108277142
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 14349 bases
Position: chr16:21812559-21826907
Accession: 108277142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029251	RRM_1	PF00076.22	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030457	-	849	-	ENSIPUP00000029272	282 (aa)	-	-
ENSIPUT00000030436	-	7902	XM_017489567	ENSIPUP00000029251	1841 (aa)	XP_017345056	A0A2D0SRC5

Gene Model

Click here to download ENSIPUG00000019762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019762	-	99	83.714	ENSIPUG00000019562	-	86	83.714
ENSIPUG00000019762	-	98	38.182	ENSIPUG00000003936	si:ch211-219a4.3	84	38.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019762	-	94	52.201	ENSAPOG00000002274	-	84	52.201	Acanthochromis_polyacanthus
ENSIPUG00000019762	-	68	50.746	ENSAOCG00000020608	-	73	50.746	Amphiprion_ocellaris
ENSIPUG00000019762	-	94	51.634	ENSCVAG00000009352	-	82	51.634	Cyprinodon_variegatus
ENSIPUG00000019762	-	92	50.456	ENSDARG00000112454	FO744833.2	81	50.986	Danio_rerio
ENSIPUG00000019762	-	95	31.783	ENSELUG00000004826	-	81	31.783	Esox_lucius
ENSIPUG00000019762	-	95	57.955	ENSELUG00000013643	-	84	57.222	Esox_lucius
ENSIPUG00000019762	-	92	44.531	ENSKMAG00000010882	-	82	45.625	Kryptolebias_marmoratus
ENSIPUG00000019762	-	95	51.892	ENSLBEG00000026419	-	82	45.122	Labrus_bergylta
ENSIPUG00000019762	-	84	51.282	ENSMZEG00005002061	-	83	51.282	Maylandia_zebra
ENSIPUG00000019762	-	78	51.235	ENSMZEG00005027856	-	70	51.235	Maylandia_zebra
ENSIPUG00000019762	-	77	49.693	ENSMMOG00000010419	-	68	49.693	Mola_mola
ENSIPUG00000019762	-	96	55.440	ENSONIG00000000234	-	81	55.440	Oreochromis_niloticus
ENSIPUG00000019762	-	99	41.994	ENSORLG00000017404	-	81	46.176	Oryzias_latipes
ENSIPUG00000019762	-	87	49.045	ENSORLG00000017386	-	80	49.045	Oryzias_latipes
ENSIPUG00000019762	-	87	46.023	ENSORLG00015004253	-	82	46.742	Oryzias_latipes_hsok
ENSIPUG00000019762	-	63	52.000	ENSORLG00015004157	-	74	52.000	Oryzias_latipes_hsok
ENSIPUG00000019762	-	92	47.561	ENSOMEG00000009483	-	85	42.931	Oryzias_melastigma
ENSIPUG00000019762	-	68	33.600	ENSPKIG00000004064	-	62	33.600	Paramormyrops_kingsleyae
ENSIPUG00000019762	-	99	45.040	ENSPFOG00000015738	-	85	42.235	Poecilia_formosa
ENSIPUG00000019762	-	77	67.647	ENSPREG00000017145	-	89	56.604	Poecilia_reticulata
ENSIPUG00000019762	-	83	47.453	ENSPNYG00000006865	-	66	47.721	Pundamilia_nyererei
ENSIPUG00000019762	-	71	35.606	ENSPNAG00000005968	-	60	35.606	Pygocentrus_nattereri
ENSIPUG00000019762	-	99	52.604	ENSSFOG00015006999	-	81	52.604	Scleropages_formosus
ENSIPUG00000019762	-	80	33.600	ENSSFOG00015019732	-	68	31.884	Scleropages_formosus
ENSIPUG00000019762	-	92	48.636	ENSSMAG00000016922	-	85	44.122	Scophthalmus_maximus
ENSIPUG00000019762	-	88	53.086	ENSSPAG00000014708	-	72	53.086	Stegastes_partitus
ENSIPUG00000019762	-	98	40.232	ENSTRUG00000003423	-	82	39.596	Takifugu_rubripes
ENSIPUG00000019762	-	92	47.619	ENSXCOG00000012535	-	78	47.619	Xiphophorus_couchianus