EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019815 (Gene tree)
Gene ID: 108266578
Gene Symbol: RO32
Alias: hnrpa3|zgc:153703
Full Name: heterogeneous nuclear ribonucleoprotein A3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4190 bases
Position: chr6:9282693-9286882
Accession: 108266578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029364	RRM_1	PF00076.22	1.8e-33	1	2
ENSIPUP00000029364	RRM_1	PF00076.22	1.8e-33	2	2
ENSIPUP00000029341	RRM_1	PF00076.22	2e-33	1	2
ENSIPUP00000029341	RRM_1	PF00076.22	2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030528	-	1512	XM_017470077	ENSIPUP00000029341	347 (aa)	XP_017325566	W5UEP8
ENSIPUT00000030552	-	1008	-	ENSIPUP00000029364	335 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000019815's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019815	RO32	83	31.935	ENSIPUG00000006899	dazap1	53	37.433
ENSIPUG00000019815	RO32	56	44.118	ENSIPUG00000024954	hnrnpd	57	43.646
ENSIPUG00000019815	RO32	56	40.000	ENSIPUG00000024951	hnrnpdl	61	39.326
ENSIPUG00000019815	RO32	53	38.172	ENSIPUG00000018218	HNRNPAB	53	38.095
ENSIPUG00000019815	RO32	73	37.551	ENSIPUG00000021097	msi2a	57	43.605
ENSIPUG00000019815	RO32	90	64.151	ENSIPUG00000002023	hnrnpa1a	83	66.029
ENSIPUG00000019815	RO32	53	58.757	ENSIPUG00000001991	-	75	58.757
ENSIPUG00000019815	RO32	74	37.815	ENSIPUG00000003732	msi2b	51	43.023
ENSIPUG00000019815	RO32	54	82.778	ENSIPUG00000022440	-	79	81.967
ENSIPUG00000019815	RO32	53	39.326	ENSIPUG00000020220	hnrnpab	53	39.227
ENSIPUG00000019815	RO32	67	36.364	ENSIPUG00000001976	msi1	55	37.278
ENSIPUG00000019815	RO32	78	64.234	ENSIPUG00000022432	hnrnpa1b	63	81.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019815	RO32	53	56.742	ENSG00000177733	HNRNPA0	58	56.742	Homo_sapiens
ENSIPUG00000019815	RO32	53	62.360	ENSAPOG00000003387	HNRNPA0	63	61.667	Acanthochromis_polyacanthus
ENSIPUG00000019815	RO32	98	66.758	ENSAPOG00000003641	hnrnpa3	75	88.298	Acanthochromis_polyacanthus
ENSIPUG00000019815	RO32	100	69.081	ENSAPOG00000014678	-	55	89.418	Acanthochromis_polyacanthus
ENSIPUG00000019815	RO32	98	66.758	ENSAPOG00000003688	hnrnpa3	53	89.418	Acanthochromis_polyacanthus
ENSIPUG00000019815	RO32	66	41.392	ENSAPOG00000003364	HNRNPA0	60	53.514	Acanthochromis_polyacanthus
ENSIPUG00000019815	RO32	53	56.425	ENSAMEG00000016316	HNRNPA0	58	56.111	Ailuropoda_melanoleuca
ENSIPUG00000019815	RO32	53	80.714	ENSAMEG00000004293	-	59	79.310	Ailuropoda_melanoleuca
ENSIPUG00000019815	RO32	53	61.236	ENSACIG00000021834	HNRNPA0	80	60.556	Amphilophus_citrinellus
ENSIPUG00000019815	RO32	61	86.893	ENSAOCG00000004095	hnrnpa3	52	89.062	Amphiprion_ocellaris
ENSIPUG00000019815	RO32	61	86.893	ENSAPEG00000022522	hnrnpa3	52	89.062	Amphiprion_percula
ENSIPUG00000019815	RO32	60	87.500	ENSATEG00000015304	hnrnpa3	57	88.542	Anabas_testudineus
ENSIPUG00000019815	RO32	53	54.237	ENSATEG00000003526	-	94	54.237	Anabas_testudineus
ENSIPUG00000019815	RO32	60	82.090	ENSACAG00000012234	-	62	69.198	Anolis_carolinensis
ENSIPUG00000019815	RO32	55	82.514	ENSANAG00000037918	-	54	81.152	Aotus_nancymaae
ENSIPUG00000019815	RO32	61	87.379	ENSACLG00000008532	hnrnpa3	57	89.062	Astatotilapia_calliptera
ENSIPUG00000019815	RO32	57	94.764	ENSAMXG00000007065	hnrnpa3	54	94.819	Astyanax_mexicanus
ENSIPUG00000019815	RO32	53	56.425	ENSBTAG00000016929	HNRNPA0	57	56.111	Bos_taurus
ENSIPUG00000019815	RO32	60	78.607	ENSCJAG00000013830	-	53	79.581	Callithrix_jacchus
ENSIPUG00000019815	RO32	58	46.087	ENSCJAG00000006112	HNRNPA0	59	56.425	Callithrix_jacchus
ENSIPUG00000019815	RO32	87	47.099	ENSCAFG00000001132	HNRNPA0	58	56.111	Canis_familiaris
ENSIPUG00000019815	RO32	87	47.099	ENSCAFG00020008142	HNRNPA0	58	56.111	Canis_lupus_dingo
ENSIPUG00000019815	RO32	53	56.425	ENSCHIG00000002602	HNRNPA0	59	56.111	Capra_hircus
ENSIPUG00000019815	RO32	55	77.049	ENSCAPG00000003643	-	50	75.393	Cavia_aperea
ENSIPUG00000019815	RO32	53	56.425	ENSCCAG00000010302	HNRNPA0	58	56.425	Cebus_capucinus
ENSIPUG00000019815	RO32	53	56.742	ENSCATG00000021167	HNRNPA0	58	56.742	Cercocebus_atys
ENSIPUG00000019815	RO32	55	72.432	ENSCATG00000038569	-	53	71.728	Cercocebus_atys
ENSIPUG00000019815	RO32	87	44.027	ENSCLAG00000015132	HNRNPA0	78	47.768	Chinchilla_lanigera
ENSIPUG00000019815	RO32	94	52.584	ENSCLAG00000007120	-	57	50.000	Chinchilla_lanigera
ENSIPUG00000019815	RO32	53	56.742	ENSCSAG00000000499	HNRNPA0	59	56.742	Chlorocebus_sabaeus
ENSIPUG00000019815	RO32	74	47.791	ENSCPBG00000008738	HNRNPA0	59	57.222	Chrysemys_picta_bellii
ENSIPUG00000019815	RO32	85	49.662	ENSCING00000013663	-	52	64.948	Ciona_intestinalis
ENSIPUG00000019815	RO32	53	56.742	ENSCANG00000038062	HNRNPA0	58	56.742	Colobus_angolensis_palliatus
ENSIPUG00000019815	RO32	55	82.703	ENSCANG00000017881	-	51	81.771	Colobus_angolensis_palliatus
ENSIPUG00000019815	RO32	58	67.662	ENSCGRG00001010070	-	90	54.037	Cricetulus_griseus_chok1gshd
ENSIPUG00000019815	RO32	54	56.667	ENSCGRG00001005548	Hnrnpa0	59	56.667	Cricetulus_griseus_chok1gshd
ENSIPUG00000019815	RO32	58	67.662	ENSCGRG00000007592	-	89	54.037	Cricetulus_griseus_crigri
ENSIPUG00000019815	RO32	59	87.940	ENSCVAG00000018995	hnrnpa3	61	84.834	Cyprinodon_variegatus
ENSIPUG00000019815	RO32	57	93.717	ENSDARG00000059351	hnrnpa3	80	93.782	Danio_rerio
ENSIPUG00000019815	RO32	60	77.723	ENSDNOG00000031964	-	65	79.474	Dasypus_novemcinctus
ENSIPUG00000019815	RO32	53	69.832	ENSEBUG00000009297	HNRNPA0	55	66.842	Eptatretus_burgeri
ENSIPUG00000019815	RO32	74	57.661	ENSEBUG00000016570	HNRNPA0	57	68.557	Eptatretus_burgeri
ENSIPUG00000019815	RO32	53	56.425	ENSECAG00000032164	HNRNPA0	60	56.111	Equus_caballus
ENSIPUG00000019815	RO32	97	73.846	ENSELUG00000023080	hnrnpa3	63	90.270	Esox_lucius
ENSIPUG00000019815	RO32	68	45.852	ENSFDAG00000019780	HNRNPA0	75	56.667	Fukomys_damarensis
ENSIPUG00000019815	RO32	53	69.189	ENSFDAG00000014067	-	56	68.421	Fukomys_damarensis
ENSIPUG00000019815	RO32	55	64.324	ENSFDAG00000018739	-	68	63.351	Fukomys_damarensis
ENSIPUG00000019815	RO32	60	54.950	ENSFDAG00000009547	-	76	43.614	Fukomys_damarensis
ENSIPUG00000019815	RO32	54	55.249	ENSFHEG00000008384	HNRNPA0	89	55.249	Fundulus_heteroclitus
ENSIPUG00000019815	RO32	53	54.545	ENSFHEG00000008390	HNRNPA0	52	54.545	Fundulus_heteroclitus
ENSIPUG00000019815	RO32	53	56.983	ENSGMOG00000016232	HNRNPA0	64	56.354	Gadus_morhua
ENSIPUG00000019815	RO32	74	50.000	ENSGALG00000006160	HNRNPA0	59	57.778	Gallus_gallus
ENSIPUG00000019815	RO32	91	69.937	ENSGACG00000004477	hnrnpa3	64	86.979	Gasterosteus_aculeatus
ENSIPUG00000019815	RO32	74	47.791	ENSGAGG00000005632	HNRNPA0	58	57.222	Gopherus_agassizii
ENSIPUG00000019815	RO32	61	86.893	ENSHBUG00000019734	hnrnpa3	57	88.542	Haplochromis_burtoni
ENSIPUG00000019815	RO32	53	61.236	ENSHBUG00000023868	HNRNPA0	70	60.556	Haplochromis_burtoni
ENSIPUG00000019815	RO32	55	72.973	ENSHGLG00000014577	-	68	72.251	Heterocephalus_glaber_female
ENSIPUG00000019815	RO32	54	56.667	ENSHGLG00000018216	HNRNPA0	60	56.667	Heterocephalus_glaber_female
ENSIPUG00000019815	RO32	59	77.273	ENSHGLG00100001336	-	54	77.604	Heterocephalus_glaber_male
ENSIPUG00000019815	RO32	60	80.100	ENSHGLG00100006677	-	58	81.152	Heterocephalus_glaber_male
ENSIPUG00000019815	RO32	54	59.880	ENSHCOG00000007174	HNRNPA0	97	59.880	Hippocampus_comes
ENSIPUG00000019815	RO32	62	53.604	ENSJJAG00000006954	Hnrnpa0	73	53.488	Jaculus_jaculus
ENSIPUG00000019815	RO32	61	85.922	ENSKMAG00000015973	hnrnpa3	57	88.021	Kryptolebias_marmoratus
ENSIPUG00000019815	RO32	59	86.935	ENSLBEG00000016767	hnrnpa3	57	87.500	Labrus_bergylta
ENSIPUG00000019815	RO32	92	46.926	ENSLACG00000014480	HNRNPA0	58	57.062	Latimeria_chalumnae
ENSIPUG00000019815	RO32	62	78.802	ENSLACG00000008189	hnrnpa3	54	83.854	Latimeria_chalumnae
ENSIPUG00000019815	RO32	59	90.452	ENSLOCG00000006986	hnrnpa3	55	90.104	Lepisosteus_oculatus
ENSIPUG00000019815	RO32	54	82.320	ENSLOCG00000006476	-	50	81.421	Lepisosteus_oculatus
ENSIPUG00000019815	RO32	54	86.792	ENSLAFG00000027712	-	58	86.420	Loxodonta_africana
ENSIPUG00000019815	RO32	53	56.742	ENSMFAG00000030522	HNRNPA0	58	56.742	Macaca_fascicularis
ENSIPUG00000019815	RO32	55	72.193	ENSMMUG00000031232	-	53	71.503	Macaca_mulatta
ENSIPUG00000019815	RO32	93	64.384	ENSMNEG00000038943	-	75	68.947	Macaca_nemestrina
ENSIPUG00000019815	RO32	53	56.742	ENSMNEG00000015863	HNRNPA0	58	56.742	Macaca_nemestrina
ENSIPUG00000019815	RO32	53	56.742	ENSMLEG00000026629	HNRNPA0	58	56.742	Mandrillus_leucophaeus
ENSIPUG00000019815	RO32	79	54.478	ENSMLEG00000033415	-	53	70.157	Mandrillus_leucophaeus
ENSIPUG00000019815	RO32	70	51.029	ENSMAMG00000017754	HNRNPA0	71	62.222	Mastacembelus_armatus
ENSIPUG00000019815	RO32	59	88.889	ENSMZEG00005004663	hnrnpa3	57	89.418	Maylandia_zebra
ENSIPUG00000019815	RO32	53	56.425	ENSMAUG00000018485	Hnrnpa0	60	56.667	Mesocricetus_auratus
ENSIPUG00000019815	RO32	55	55.914	ENSMODG00000014720	HNRNPA0	68	56.742	Monodelphis_domestica
ENSIPUG00000019815	RO32	52	57.143	ENSMODG00000002463	-	93	57.143	Monodelphis_domestica
ENSIPUG00000019815	RO32	60	74.129	ENSMODG00000024570	-	53	74.869	Monodelphis_domestica
ENSIPUG00000019815	RO32	94	64.688	ENSMALG00000009691	hnrnpa3	77	90.710	Monopterus_albus
ENSIPUG00000019815	RO32	53	56.425	MGP_CAROLIEiJ_G0018593	Hnrnpa0	59	56.667	Mus_caroli
ENSIPUG00000019815	RO32	53	56.425	ENSMUSG00000007836	Hnrnpa0	59	56.667	Mus_musculus
ENSIPUG00000019815	RO32	53	56.425	MGP_PahariEiJ_G0019657	Hnrnpa0	59	56.667	Mus_pahari
ENSIPUG00000019815	RO32	53	56.425	MGP_SPRETEiJ_G0019473	Hnrnpa0	59	56.667	Mus_spretus
ENSIPUG00000019815	RO32	87	47.782	ENSMPUG00000019790	HNRNPA0	58	56.111	Mustela_putorius_furo
ENSIPUG00000019815	RO32	53	55.866	ENSMLUG00000028644	-	54	55.556	Myotis_lucifugus
ENSIPUG00000019815	RO32	53	56.425	ENSNGAG00000008883	Hnrnpa0	63	55.135	Nannospalax_galili
ENSIPUG00000019815	RO32	90	55.556	ENSNGAG00000001008	-	54	63.452	Nannospalax_galili
ENSIPUG00000019815	RO32	55	79.459	ENSNLEG00000027151	-	55	78.646	Nomascus_leucogenys
ENSIPUG00000019815	RO32	54	56.667	ENSODEG00000019566	HNRNPA0	59	56.667	Octodon_degus
ENSIPUG00000019815	RO32	55	83.607	ENSODEG00000016578	-	60	82.199	Octodon_degus
ENSIPUG00000019815	RO32	60	87.000	ENSORLG00000017561	hnrnpa3	56	88.021	Oryzias_latipes
ENSIPUG00000019815	RO32	57	53.631	ENSORLG00000027074	-	79	53.631	Oryzias_latipes
ENSIPUG00000019815	RO32	59	50.495	ENSORLG00000025015	-	59	52.717	Oryzias_latipes
ENSIPUG00000019815	RO32	59	50.495	ENSORLG00000025332	-	59	52.717	Oryzias_latipes
ENSIPUG00000019815	RO32	94	43.218	ENSORLG00020008203	-	60	52.809	Oryzias_latipes_hni
ENSIPUG00000019815	RO32	93	42.581	ENSORLG00020007505	-	60	53.073	Oryzias_latipes_hni
ENSIPUG00000019815	RO32	93	42.767	ENSORLG00020007109	-	58	52.459	Oryzias_latipes_hni
ENSIPUG00000019815	RO32	60	87.000	ENSORLG00020020788	hnrnpa3	56	88.021	Oryzias_latipes_hni
ENSIPUG00000019815	RO32	88	42.568	ENSORLG00020022487	-	62	55.172	Oryzias_latipes_hni
ENSIPUG00000019815	RO32	60	87.000	ENSORLG00015014774	hnrnpa3	56	88.021	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	93	42.434	ENSORLG00015016157	-	75	43.290	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	93	41.883	ENSORLG00015016169	HNRNPA0	60	52.514	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	55	50.811	ENSORLG00015016302	HNRNPA0	61	50.265	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	94	44.444	ENSORLG00015017144	-	59	53.933	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	94	42.901	ENSORLG00015016507	-	56	53.846	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	56	47.802	ENSORLG00015016236	HNRNPA0	64	45.181	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	71	46.460	ENSORLG00015015182	-	93	46.460	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	93	42.715	ENSORLG00015015185	-	64	53.933	Oryzias_latipes_hsok
ENSIPUG00000019815	RO32	60	87.500	ENSOMEG00000004838	hnrnpa3	57	88.542	Oryzias_melastigma
ENSIPUG00000019815	RO32	53	56.742	ENSPANG00000012900	HNRNPA0	58	56.742	Papio_anubis
ENSIPUG00000019815	RO32	53	62.712	ENSPKIG00000020281	-	53	61.326	Paramormyrops_kingsleyae
ENSIPUG00000019815	RO32	87	48.276	ENSPKIG00000020270	HNRNPA0	64	60.773	Paramormyrops_kingsleyae
ENSIPUG00000019815	RO32	59	87.437	ENSPKIG00000022916	hnrnpa3	69	88.021	Paramormyrops_kingsleyae
ENSIPUG00000019815	RO32	58	84.021	ENSPMGG00000000747	hnrnpa3	76	83.851	Periophthalmus_magnuspinnatus
ENSIPUG00000019815	RO32	81	45.756	ENSPEMG00000020274	Hnrnpa0	71	56.667	Peromyscus_maniculatus_bairdii
ENSIPUG00000019815	RO32	54	76.667	ENSPMAG00000004449	-	77	76.667	Petromyzon_marinus
ENSIPUG00000019815	RO32	61	85.437	ENSPFOG00000014049	hnrnpa3	58	87.500	Poecilia_formosa
ENSIPUG00000019815	RO32	52	54.971	ENSPLAG00000015223	-	56	54.971	Poecilia_latipinna
ENSIPUG00000019815	RO32	61	85.437	ENSPMEG00000006390	hnrnpa3	58	87.500	Poecilia_mexicana
ENSIPUG00000019815	RO32	54	60.234	ENSPMEG00000017025	HNRNPA0	97	59.195	Poecilia_mexicana
ENSIPUG00000019815	RO32	66	82.969	ENSPREG00000005411	hnrnpa3	63	87.831	Poecilia_reticulata
ENSIPUG00000019815	RO32	52	61.006	ENSPREG00000010619	HNRNPA0	75	61.006	Poecilia_reticulata
ENSIPUG00000019815	RO32	53	56.742	ENSPPYG00000015814	HNRNPA0	58	56.742	Pongo_abelii
ENSIPUG00000019815	RO32	55	82.703	ENSPPYG00000001012	-	62	81.675	Pongo_abelii
ENSIPUG00000019815	RO32	88	86.335	ENSPPYG00000012967	-	75	85.542	Pongo_abelii
ENSIPUG00000019815	RO32	55	90.164	ENSPNYG00000008424	hnrnpa3	77	89.617	Pundamilia_nyererei
ENSIPUG00000019815	RO32	53	58.757	ENSPNAG00000023333	HNRNPA0	62	57.459	Pygocentrus_nattereri
ENSIPUG00000019815	RO32	53	56.742	ENSRBIG00000023673	HNRNPA0	58	56.742	Rhinopithecus_bieti
ENSIPUG00000019815	RO32	53	56.742	ENSRROG00000002558	HNRNPA0	58	56.742	Rhinopithecus_roxellana
ENSIPUG00000019815	RO32	90	60.568	ENSRROG00000034643	-	55	67.016	Rhinopithecus_roxellana
ENSIPUG00000019815	RO32	53	63.068	ENSSFOG00015002650	HNRNPA0	56	62.570	Scleropages_formosus
ENSIPUG00000019815	RO32	59	80.203	ENSSFOG00015016280	hnrnpa1	54	82.514	Scleropages_formosus
ENSIPUG00000019815	RO32	61	86.341	ENSSFOG00015001814	hnrnpa3	53	89.062	Scleropages_formosus
ENSIPUG00000019815	RO32	62	85.577	ENSSMAG00000015218	hnrnpa3	51	88.542	Scophthalmus_maximus
ENSIPUG00000019815	RO32	61	85.922	ENSSDUG00000000381	hnrnpa3	62	88.021	Seriola_dumerili
ENSIPUG00000019815	RO32	61	86.893	ENSSPAG00000008969	hnrnpa3	57	89.062	Stegastes_partitus
ENSIPUG00000019815	RO32	93	74.613	ENSTRUG00000017504	hnrnpa3	57	85.938	Takifugu_rubripes
ENSIPUG00000019815	RO32	52	50.575	ENSTRUG00000021494	-	58	50.575	Takifugu_rubripes
ENSIPUG00000019815	RO32	59	86.294	ENSTNIG00000016958	hnrnpa3	55	86.842	Tetraodon_nigroviridis
ENSIPUG00000019815	RO32	53	56.425	ENSVVUG00000014736	HNRNPA0	58	56.111	Vulpes_vulpes
ENSIPUG00000019815	RO32	60	85.075	ENSXETG00000001806	hnrnpa3	51	85.789	Xenopus_tropicalis
ENSIPUG00000019815	RO32	89	47.651	ENSXETG00000003833	hnrnpa0	59	56.831	Xenopus_tropicalis
ENSIPUG00000019815	RO32	51	54.237	ENSXMAG00000029150	HNRNPA0	58	54.545	Xiphophorus_maculatus
ENSIPUG00000019815	RO32	59	86.935	ENSXMAG00000000439	hnrnpa3	58	87.500	Xiphophorus_maculatus
ENSIPUG00000019815	RO32	54	60.234	ENSXMAG00000019804	HNRNPA0	96	59.195	Xiphophorus_maculatus