EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019836 (Gene tree)
Gene ID: -
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 15864 bases
Position: chr11:94313-110176
Accession: ZDB-GENE-061215-17
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029362	EF_TS	PF00889.19	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030549	-	852	-	ENSIPUP00000029362	283 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000019836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019836	tsfm	90	38.462	ENSG00000123297	TSFM	100	38.095	Homo_sapiens
ENSIPUG00000019836	tsfm	82	55.000	ENSAPOG00000014844	tsfm	91	55.000	Acanthochromis_polyacanthus
ENSIPUG00000019836	tsfm	83	40.068	ENSAMEG00000005452	TSFM	91	40.541	Ailuropoda_melanoleuca
ENSIPUG00000019836	tsfm	86	52.921	ENSACIG00000001066	tsfm	90	54.874	Amphilophus_citrinellus
ENSIPUG00000019836	tsfm	81	54.152	ENSAOCG00000007132	tsfm	90	54.152	Amphiprion_ocellaris
ENSIPUG00000019836	tsfm	81	64.835	ENSAPEG00000015755	tsfm	90	54.874	Amphiprion_percula
ENSIPUG00000019836	tsfm	90	51.307	ENSATEG00000001497	tsfm	98	51.307	Anabas_testudineus
ENSIPUG00000019836	tsfm	93	38.629	ENSACAG00000013044	TSFM	97	38.629	Anolis_carolinensis
ENSIPUG00000019836	tsfm	90	37.778	ENSANAG00000038019	TSFM	97	38.245	Aotus_nancymaae
ENSIPUG00000019836	tsfm	83	53.357	ENSACLG00000000139	tsfm	92	53.357	Astatotilapia_calliptera
ENSIPUG00000019836	tsfm	81	58.696	ENSAMXG00000001713	tsfm	90	58.696	Astyanax_mexicanus
ENSIPUG00000019836	tsfm	77	41.328	ENSBTAG00000016912	TSFM	85	39.755	Bos_taurus
ENSIPUG00000019836	tsfm	83	39.519	ENSCJAG00000006600	TSFM	91	39.262	Callithrix_jacchus
ENSIPUG00000019836	tsfm	79	40.502	ENSCAFG00000000293	-	88	40.989	Canis_familiaris
ENSIPUG00000019836	tsfm	79	40.502	ENSCAFG00020022844	TSFM	77	39.623	Canis_lupus_dingo
ENSIPUG00000019836	tsfm	77	41.328	ENSCHIG00000013850	TSFM	97	39.365	Capra_hircus
ENSIPUG00000019836	tsfm	61	45.405	ENSTSYG00000028892	TSFM	71	45.989	Carlito_syrichta
ENSIPUG00000019836	tsfm	60	42.197	ENSCAPG00000007733	-	90	42.938	Cavia_aperea
ENSIPUG00000019836	tsfm	76	39.259	ENSCPOG00000037732	TSFM	84	39.781	Cavia_porcellus
ENSIPUG00000019836	tsfm	90	37.942	ENSCCAG00000033254	TSFM	97	38.413	Cebus_capucinus
ENSIPUG00000019836	tsfm	90	38.462	ENSCATG00000016867	TSFM	97	38.924	Cercocebus_atys
ENSIPUG00000019836	tsfm	76	38.889	ENSCLAG00000009226	TSFM	85	39.350	Chinchilla_lanigera
ENSIPUG00000019836	tsfm	90	38.585	ENSCSAG00000004601	TSFM	97	39.048	Chlorocebus_sabaeus
ENSIPUG00000019836	tsfm	51	50.000	ENSCHOG00000002360	TSFM	73	51.667	Choloepus_hoffmanni
ENSIPUG00000019836	tsfm	86	41.722	ENSCPBG00000018147	TSFM	91	41.722	Chrysemys_picta_bellii
ENSIPUG00000019836	tsfm	60	46.448	ENSCANG00000030298	TSFM	69	47.059	Colobus_angolensis_palliatus
ENSIPUG00000019836	tsfm	82	41.581	ENSCGRG00001023000	TSFM	89	41.781	Cricetulus_griseus_chok1gshd
ENSIPUG00000019836	tsfm	82	41.581	ENSCGRG00000006566	TSFM	89	41.781	Cricetulus_griseus_crigri
ENSIPUG00000019836	tsfm	61	61.538	ENSCSEG00000003376	tsfm	64	61.538	Cynoglossus_semilaevis
ENSIPUG00000019836	tsfm	85	53.979	ENSCVAG00000001340	tsfm	95	53.979	Cyprinodon_variegatus
ENSIPUG00000019836	tsfm	79	52.593	ENSDARG00000060748	tsfm	89	52.593	Danio_rerio
ENSIPUG00000019836	tsfm	88	38.033	ENSDNOG00000049415	TSFM	95	38.511	Dasypus_novemcinctus
ENSIPUG00000019836	tsfm	63	46.316	ENSDORG00000007272	Tsfm	72	46.316	Dipodomys_ordii
ENSIPUG00000019836	tsfm	82	39.024	ENSETEG00000002686	-	89	39.446	Echinops_telfairi
ENSIPUG00000019836	tsfm	83	40.411	ENSEASG00005007292	TSFM	72	40.878	Equus_asinus_asinus
ENSIPUG00000019836	tsfm	83	39.726	ENSECAG00000010520	TSFM	89	37.764	Equus_caballus
ENSIPUG00000019836	tsfm	81	54.152	ENSELUG00000015481	tsfm	90	54.152	Esox_lucius
ENSIPUG00000019836	tsfm	83	40.068	ENSFCAG00000023794	TSFM	97	39.557	Felis_catus
ENSIPUG00000019836	tsfm	93	37.188	ENSFDAG00000016548	TSFM	98	37.188	Fukomys_damarensis
ENSIPUG00000019836	tsfm	81	54.317	ENSFHEG00000013458	tsfm	91	54.317	Fundulus_heteroclitus
ENSIPUG00000019836	tsfm	81	51.264	ENSGMOG00000000868	tsfm	96	51.264	Gadus_morhua
ENSIPUG00000019836	tsfm	91	50.654	ENSGAFG00000021764	tsfm	98	50.654	Gambusia_affinis
ENSIPUG00000019836	tsfm	81	55.957	ENSGACG00000000697	tsfm	90	56.716	Gasterosteus_aculeatus
ENSIPUG00000019836	tsfm	81	42.509	ENSGAGG00000020897	TSFM	85	42.509	Gopherus_agassizii
ENSIPUG00000019836	tsfm	90	38.782	ENSGGOG00000001415	TSFM	97	39.241	Gorilla_gorilla
ENSIPUG00000019836	tsfm	83	53.710	ENSHBUG00000021738	tsfm	92	53.710	Haplochromis_burtoni
ENSIPUG00000019836	tsfm	78	39.781	ENSHGLG00000008559	TSFM	84	39.781	Heterocephalus_glaber_female
ENSIPUG00000019836	tsfm	78	39.781	ENSHGLG00100005643	TSFM	84	39.781	Heterocephalus_glaber_male
ENSIPUG00000019836	tsfm	81	54.643	ENSHCOG00000021049	tsfm	92	54.643	Hippocampus_comes
ENSIPUG00000019836	tsfm	77	40.809	ENSSTOG00000001159	TSFM	85	40.647	Ictidomys_tridecemlineatus
ENSIPUG00000019836	tsfm	93	36.364	ENSJJAG00000012907	Tsfm	98	36.364	Jaculus_jaculus
ENSIPUG00000019836	tsfm	81	53.069	ENSKMAG00000018906	tsfm	91	52.688	Kryptolebias_marmoratus
ENSIPUG00000019836	tsfm	90	53.922	ENSLBEG00000019779	tsfm	98	53.922	Labrus_bergylta
ENSIPUG00000019836	tsfm	86	41.472	ENSLACG00000018125	TSFM	92	41.472	Latimeria_chalumnae
ENSIPUG00000019836	tsfm	81	37.545	ENSLOCG00000006608	tsfm	89	37.545	Lepisosteus_oculatus
ENSIPUG00000019836	tsfm	86	39.465	ENSLAFG00000015177	TSFM	98	38.679	Loxodonta_africana
ENSIPUG00000019836	tsfm	90	38.462	ENSMFAG00000036132	TSFM	97	38.924	Macaca_fascicularis
ENSIPUG00000019836	tsfm	90	38.462	ENSMMUG00000005893	TSFM	97	38.924	Macaca_mulatta
ENSIPUG00000019836	tsfm	90	38.462	ENSMNEG00000026351	TSFM	97	38.924	Macaca_nemestrina
ENSIPUG00000019836	tsfm	90	38.462	ENSMLEG00000029811	TSFM	97	38.924	Mandrillus_leucophaeus
ENSIPUG00000019836	tsfm	92	54.545	ENSMAMG00000002230	tsfm	98	54.545	Mastacembelus_armatus
ENSIPUG00000019836	tsfm	83	53.710	ENSMZEG00005008170	tsfm	92	53.710	Maylandia_zebra
ENSIPUG00000019836	tsfm	77	41.697	ENSMAUG00000011705	Tsfm	90	41.237	Mesocricetus_auratus
ENSIPUG00000019836	tsfm	90	38.141	ENSMICG00000003812	TSFM	97	38.608	Microcebus_murinus
ENSIPUG00000019836	tsfm	84	39.590	ENSMOCG00000006104	Tsfm	91	39.796	Microtus_ochrogaster
ENSIPUG00000019836	tsfm	81	55.235	ENSMMOG00000021854	tsfm	90	55.235	Mola_mola
ENSIPUG00000019836	tsfm	86	39.731	ENSMODG00000021351	TSFM	89	39.731	Monodelphis_domestica
ENSIPUG00000019836	tsfm	81	54.480	ENSMALG00000015046	tsfm	90	54.480	Monopterus_albus
ENSIPUG00000019836	tsfm	85	41.611	MGP_CAROLIEiJ_G0015873	Tsfm	91	41.611	Mus_caroli
ENSIPUG00000019836	tsfm	86	41.472	ENSMUSG00000040521	Tsfm	92	41.472	Mus_musculus
ENSIPUG00000019836	tsfm	86	42.140	MGP_PahariEiJ_G0031212	Tsfm	92	42.140	Mus_pahari
ENSIPUG00000019836	tsfm	86	42.000	MGP_SPRETEiJ_G0016699	Tsfm	92	42.000	Mus_spretus
ENSIPUG00000019836	tsfm	79	41.071	ENSMPUG00000002051	TSFM	87	41.549	Mustela_putorius_furo
ENSIPUG00000019836	tsfm	79	40.647	ENSMLUG00000005940	TSFM	98	39.557	Myotis_lucifugus
ENSIPUG00000019836	tsfm	92	38.365	ENSNGAG00000014356	Tsfm	97	38.679	Nannospalax_galili
ENSIPUG00000019836	tsfm	82	53.929	ENSNBRG00000016413	tsfm	91	53.929	Neolamprologus_brichardi
ENSIPUG00000019836	tsfm	90	39.103	ENSNLEG00000017178	TSFM	97	39.557	Nomascus_leucogenys
ENSIPUG00000019836	tsfm	81	36.066	ENSOPRG00000006670	TSFM	89	36.482	Ochotona_princeps
ENSIPUG00000019836	tsfm	89	39.286	ENSODEG00000001882	TSFM	95	39.482	Octodon_degus
ENSIPUG00000019836	tsfm	82	49.466	ENSONIG00000019100	tsfm	90	49.466	Oreochromis_niloticus
ENSIPUG00000019836	tsfm	78	36.027	ENSOCUG00000012512	TSFM	70	36.027	Oryctolagus_cuniculus
ENSIPUG00000019836	tsfm	81	53.571	ENSORLG00000030201	tsfm	90	53.571	Oryzias_latipes
ENSIPUG00000019836	tsfm	81	53.571	ENSORLG00020004740	tsfm	90	53.571	Oryzias_latipes_hni
ENSIPUG00000019836	tsfm	81	53.214	ENSORLG00015022703	tsfm	92	53.214	Oryzias_latipes_hsok
ENSIPUG00000019836	tsfm	83	56.184	ENSOMEG00000008934	tsfm	90	56.184	Oryzias_melastigma
ENSIPUG00000019836	tsfm	91	38.413	ENSOGAG00000012235	TSFM	97	38.413	Otolemur_garnettii
ENSIPUG00000019836	tsfm	84	38.312	ENSOARG00000005095	TSFM	96	39.755	Ovis_aries
ENSIPUG00000019836	tsfm	90	38.462	ENSPPAG00000043428	TSFM	97	38.924	Pan_paniscus
ENSIPUG00000019836	tsfm	83	40.068	ENSPPRG00000009667	TSFM	97	39.557	Panthera_pardus
ENSIPUG00000019836	tsfm	98	38.253	ENSPTIG00000015290	TSFM	97	39.557	Panthera_tigris_altaica
ENSIPUG00000019836	tsfm	90	38.462	ENSPTRG00000005152	TSFM	97	38.924	Pan_troglodytes
ENSIPUG00000019836	tsfm	88	38.562	ENSPANG00000007866	TSFM	95	39.286	Papio_anubis
ENSIPUG00000019836	tsfm	81	55.596	ENSPKIG00000008495	tsfm	88	55.596	Paramormyrops_kingsleyae
ENSIPUG00000019836	tsfm	63	46.632	ENSPSIG00000015776	TSFM	88	46.632	Pelodiscus_sinensis
ENSIPUG00000019836	tsfm	81	52.708	ENSPMGG00000007022	tsfm	91	52.708	Periophthalmus_magnuspinnatus
ENSIPUG00000019836	tsfm	84	39.322	ENSPEMG00000000414	Tsfm	91	39.865	Peromyscus_maniculatus_bairdii
ENSIPUG00000019836	tsfm	78	39.493	ENSPCIG00000023619	TSFM	87	39.493	Phascolarctos_cinereus
ENSIPUG00000019836	tsfm	91	50.000	ENSPFOG00000010782	tsfm	98	49.673	Poecilia_formosa
ENSIPUG00000019836	tsfm	91	49.346	ENSPLAG00000008105	tsfm	98	49.346	Poecilia_latipinna
ENSIPUG00000019836	tsfm	91	49.673	ENSPMEG00000002567	tsfm	98	49.673	Poecilia_mexicana
ENSIPUG00000019836	tsfm	91	48.693	ENSPREG00000016696	tsfm	98	48.693	Poecilia_reticulata
ENSIPUG00000019836	tsfm	90	39.103	ENSPPYG00000004708	TSFM	83	39.557	Pongo_abelii
ENSIPUG00000019836	tsfm	88	37.658	ENSPCAG00000003789	TSFM	98	37.690	Procavia_capensis
ENSIPUG00000019836	tsfm	83	40.206	ENSPCOG00000021606	TSFM	97	38.924	Propithecus_coquereli
ENSIPUG00000019836	tsfm	76	40.892	ENSPVAG00000012141	TSFM	97	39.241	Pteropus_vampyrus
ENSIPUG00000019836	tsfm	83	53.710	ENSPNYG00000001230	tsfm	92	53.710	Pundamilia_nyererei
ENSIPUG00000019836	tsfm	80	63.636	ENSPNAG00000003241	tsfm	91	63.636	Pygocentrus_nattereri
ENSIPUG00000019836	tsfm	82	37.631	ENSRNOG00000048843	Tsfm	89	37.979	Rattus_norvegicus
ENSIPUG00000019836	tsfm	77	39.927	ENSRBIG00000037278	TSFM	97	38.924	Rhinopithecus_bieti
ENSIPUG00000019836	tsfm	90	38.462	ENSRROG00000031769	TSFM	97	38.924	Rhinopithecus_roxellana
ENSIPUG00000019836	tsfm	80	40.167	ENSSBOG00000021465	TSFM	96	38.489	Saimiri_boliviensis_boliviensis
ENSIPUG00000019836	tsfm	97	40.179	ENSSHAG00000009664	TSFM	96	40.179	Sarcophilus_harrisii
ENSIPUG00000019836	tsfm	83	52.281	ENSSFOG00015014457	tsfm	93	52.281	Scleropages_formosus
ENSIPUG00000019836	tsfm	87	53.220	ENSSMAG00000002467	tsfm	95	53.220	Scophthalmus_maximus
ENSIPUG00000019836	tsfm	81	56.318	ENSSDUG00000006833	tsfm	90	56.318	Seriola_dumerili
ENSIPUG00000019836	tsfm	81	55.596	ENSSLDG00000000715	tsfm	89	55.596	Seriola_lalandi_dorsalis
ENSIPUG00000019836	tsfm	76	39.927	ENSSPUG00000006435	TSFM	98	39.927	Sphenodon_punctatus
ENSIPUG00000019836	tsfm	81	52.347	ENSSPAG00000002548	tsfm	90	52.347	Stegastes_partitus
ENSIPUG00000019836	tsfm	84	39.590	ENSSSCG00000037767	TSFM	77	40.000	Sus_scrofa
ENSIPUG00000019836	tsfm	90	51.163	ENSTRUG00000003081	tsfm	98	51.163	Takifugu_rubripes
ENSIPUG00000019836	tsfm	84	52.113	ENSTNIG00000014578	tsfm	94	52.113	Tetraodon_nigroviridis
ENSIPUG00000019836	tsfm	75	45.968	ENSTBEG00000011603	TSFM	78	46.825	Tupaia_belangeri
ENSIPUG00000019836	tsfm	85	39.527	ENSTTRG00000008351	TSFM	97	38.486	Tursiops_truncatus
ENSIPUG00000019836	tsfm	83	40.068	ENSUAMG00000013142	TSFM	91	40.541	Ursus_americanus
ENSIPUG00000019836	tsfm	83	40.068	ENSUMAG00000020123	TSFM	91	40.541	Ursus_maritimus
ENSIPUG00000019836	tsfm	68	50.000	ENSVPAG00000000209	TSFM	61	50.000	Vicugna_pacos
ENSIPUG00000019836	tsfm	81	39.860	ENSVVUG00000016735	TSFM	91	40.000	Vulpes_vulpes
ENSIPUG00000019836	tsfm	81	42.958	ENSXETG00000009653	tsfm	97	42.958	Xenopus_tropicalis
ENSIPUG00000019836	tsfm	91	50.327	ENSXMAG00000018468	tsfm	98	50.327	Xiphophorus_maculatus