EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000019839 (Gene tree)
Gene ID: 108260430
Gene Symbol: si:ch1073-224n8.1
Alias: fi11a05|wu:fi11a05
Full Name: zinc finger protein GLI4-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5621 bases
Position: chr28:1781729-1787349
Accession: 108260430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029363	zf-C2H2	PF00096.26	1.4e-20	1	5
ENSIPUP00000029363	zf-C2H2	PF00096.26	1.4e-20	2	5
ENSIPUP00000029363	zf-C2H2	PF00096.26	1.4e-20	3	5
ENSIPUP00000029363	zf-C2H2	PF00096.26	1.4e-20	4	5
ENSIPUP00000029363	zf-C2H2	PF00096.26	1.4e-20	5	5
ENSIPUP00000029363	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030550	-	4782	XM_017460719	ENSIPUP00000029363	561 (aa)	XP_017316208	A0A2D0QC00

Gene Model

Click here to download ENSIPUG00000019839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019839	si:ch1073-224n8.1	95	68.929	ENSAMXG00000035286	si:ch1073-224n8.1	83	87.963	Astyanax_mexicanus
ENSIPUG00000019839	si:ch1073-224n8.1	100	61.149	ENSDARG00000104485	si:ch1073-224n8.1	100	60.473	Danio_rerio
ENSIPUG00000019839	si:ch1073-224n8.1	81	53.472	ENSPNAG00000004784	-	58	56.044	Pygocentrus_nattereri