EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000019854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 3301 bases
Position: chr3:32641273-32644573
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000029368	RVT_1	PF00078.27	4.7e-41	1	1
ENSIPUP00000029368	Exo_endo_phos	PF03372.23	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000030556	-	3301	-	ENSIPUP00000029368	995 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000019854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000019854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000019854	-	75	96.123	ENSIPUG00000019735	-	100	96.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000019854	-	63	31.882	ENSATEG00000009245	-	87	32.143	Anabas_testudineus
ENSIPUG00000019854	-	68	31.633	ENSATEG00000009442	-	88	31.878	Anabas_testudineus
ENSIPUG00000019854	-	63	31.846	ENSACLG00000019987	-	85	31.846	Astatotilapia_calliptera
ENSIPUG00000019854	-	64	31.651	ENSACLG00000012407	-	82	32.116	Astatotilapia_calliptera
ENSIPUG00000019854	-	81	43.650	ENSAMXG00000041658	-	95	43.650	Astyanax_mexicanus
ENSIPUG00000019854	-	51	37.378	ENSAMXG00000029153	-	99	37.378	Astyanax_mexicanus
ENSIPUG00000019854	-	87	31.243	ENSCSAVG00000005792	-	99	31.519	Ciona_savignyi
ENSIPUG00000019854	-	73	36.376	ENSLACG00000004055	-	99	36.376	Latimeria_chalumnae
ENSIPUG00000019854	-	96	39.271	ENSLACG00000014846	-	100	39.271	Latimeria_chalumnae
ENSIPUG00000019854	-	55	30.991	ENSORLG00015007384	-	93	30.991	Oryzias_latipes_hsok
ENSIPUG00000019854	-	66	30.473	ENSOMEG00000002451	-	87	30.473	Oryzias_melastigma
ENSIPUG00000019854	-	63	30.710	ENSPREG00000023202	-	88	30.710	Poecilia_reticulata
ENSIPUG00000019854	-	63	30.312	ENSPREG00000008362	-	81	30.312	Poecilia_reticulata