EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000020055 (Gene tree)
Gene ID
108270367
Gene Symbol
plecb
Alias
si:ch211-24c14.1
Full Name
plectin-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
76085 bases
Position
chr1:23399630-23475714
Accession
108270367
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000029758S10_plectinPF03501.154.1e-3711
ENSIPUP00000029702S10_plectinPF03501.154.1e-3711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000030865-13664-ENSIPUP000000296654407 (aa)--
ENSIPUT00000030903-17613XM_017476980ENSIPUP000000297025550 (aa)XP_017332469-
ENSIPUT00000031006-13993XM_017477077ENSIPUP000000298044453 (aa)XP_017332566-
ENSIPUT00000030960-17598XM_017477007ENSIPUP000000297585545 (aa)XP_017332496A0A2D0RPT8
ENSIPUT00000031071-13311XM_017477051ENSIPUP000000298664436 (aa)XP_017332540-
Gene Model
Click here to download ENSIPUG00000020055's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020055's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000020055plecb8775.440ENSATEG00000024559plecb8775.419Anabas_testudineus
ENSIPUG00000020055plecb8675.064ENSACLG00000022613plecb8975.228Astatotilapia_calliptera
ENSIPUG00000020055plecb8675.000ENSCVAG00000013972plecb8474.682Cyprinodon_variegatus
ENSIPUG00000020055plecb8476.413ENSELUG00000020803plecb8576.350Esox_lucius
ENSIPUG00000020055plecb8276.923ENSGMOG00000006545plecb9976.923Gadus_morhua
ENSIPUG00000020055plecb8278.947ENSGACG00000005431plecb9881.818Gasterosteus_aculeatus
ENSIPUG00000020055plecb8277.632ENSKMAG00000003609plecb9977.632Kryptolebias_marmoratus
ENSIPUG00000020055plecb8672.084ENSLBEG00000004779plecb8274.102Labrus_bergylta
ENSIPUG00000020055plecb8375.680ENSMAMG00000001487plecb8475.812Mastacembelus_armatus
ENSIPUG00000020055plecb8171.097ENSONIG00000013803pleca9970.517Oreochromis_niloticus
ENSIPUG00000020055plecb8773.581ENSORLG00000023311plecb8972.682Oryzias_latipes
ENSIPUG00000020055plecb8773.363ENSORLG00020001716plecb9271.487Oryzias_latipes_hni
ENSIPUG00000020055plecb8773.452ENSORLG00015017959plecb9072.213Oryzias_latipes_hsok
ENSIPUG00000020055plecb8673.993ENSOMEG00000011949plecb9073.485Oryzias_melastigma
ENSIPUG00000020055plecb8272.198ENSPKIG00000014989pleca9072.244Paramormyrops_kingsleyae
ENSIPUG00000020055plecb10076.594ENSPNAG00000001581plecb10076.912Pygocentrus_nattereri
ENSIPUG00000020055plecb8275.640ENSSMAG00000007821plecb9967.341Scophthalmus_maximus
ENSIPUG00000020055plecb8773.171ENSTRUG00000003715plecb8973.469Takifugu_rubripes

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