EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000020082 (Gene tree)
Gene ID
108278386
Gene Symbol
rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
19241 bases
Position
chr2:6085138-6104378
Accession
108278386
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000029809MMR_HSR1PF01926.239.5e-0511
ENSIPUP00000029784MMR_HSR1PF01926.239.6e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000031011-642-ENSIPUP00000029809213 (aa)--
ENSIPUT00000030986-4353XM_017491739ENSIPUP00000029784222 (aa)XP_017347228W8PK18
Gene Model
Click here to download ENSIPUG00000020082's gene model file
Pathways
Pathway IDPathway NameSource
ipu04144EndocytosisKEGG
ipu04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020082's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000020082rab5c6635.714ENSIPUG00000016494rab237336.842
ENSIPUG00000020082rab5c8131.034ENSIPUG00000006053hras9131.034
ENSIPUG00000020082rab5c8941.799ENSIPUG00000015058rab6b8941.799
ENSIPUG00000020082rab5c9132.524ENSIPUG00000022673rab367932.524
ENSIPUG00000020082rab5c7747.853ENSIPUG00000019927rab11bb7547.853
ENSIPUG00000020082rab5c7237.662ENSIPUG00000020226RAB157537.662
ENSIPUG00000020082rab5c9243.939ENSIPUG00000006126Rab259443.939
ENSIPUG00000020082rab5c9235.122ENSIPUG00000014035rab9a9635.122
ENSIPUG00000020082rab5c8240.556ENSIPUG00000017401rab127040.000
ENSIPUG00000020082rab5c7638.554ENSIPUG00000014269rab33a7238.554
ENSIPUG00000020082rab5c9336.816ENSIPUG00000019237rab159336.816
ENSIPUG00000020082rab5c7937.059ENSIPUG00000024203rab39ba8037.059
ENSIPUG00000020082rab5c8142.857ENSIPUG00000021010Rab309142.857
ENSIPUG00000020082rab5c7932.738ENSIPUG00000024568rheb9032.738
ENSIPUG00000020082rab5c7747.853ENSIPUG00000025100rab11b7547.853
ENSIPUG00000020082rab5c7837.500ENSIPUG00000016261RAB197338.889
ENSIPUG00000020082rab5c7744.172ENSIPUG00000019382rab418143.506
ENSIPUG00000020082rab5c7831.765ENSIPUG00000024531rab346731.765
ENSIPUG00000020082rab5c7730.994ENSIPUG00000005254RERG8531.034
ENSIPUG00000020082rab5c9140.196ENSIPUG00000022445RAB7A9640.196
ENSIPUG00000020082rab5c7950.888ENSIPUG00000018050RAB318750.888
ENSIPUG00000020082rab5c9243.939ENSIPUG00000017890Rab1A9643.939
ENSIPUG00000020082rab5c9139.175ENSIPUG00000003199rab139539.175
ENSIPUG00000020082rab5c8941.799ENSIPUG00000015525-8741.799
ENSIPUG00000020082rab5c5632.258ENSIPUG00000000931arl8ba6332.258
ENSIPUG00000020082rab5c7638.150ENSIPUG00000017684rab33b7338.150
ENSIPUG00000020082rab5c9740.000ENSIPUG00000006091RAB11A9940.000
ENSIPUG00000020082rab5c9639.024ENSIPUG00000010859rab18b9739.024
ENSIPUG00000020082rab5c7747.853ENSIPUG00000012218RAB257747.853
ENSIPUG00000020082rab5c9885.780ENSIPUG00000023392rab5a9286.567
ENSIPUG00000020082rab5c9041.709ENSIPUG00000007415rab148742.328
ENSIPUG00000020082rab5c7433.125ENSIPUG00000017447rab34a6233.125
ENSIPUG00000020082rab5c7935.882ENSIPUG00000020833rab39b8035.882
ENSIPUG00000020082rab5c8841.667ENSIPUG00000021401Rab11a7647.853
ENSIPUG00000020082rab5c9249.746ENSIPUG00000010794rab22a9749.746
ENSIPUG00000020082rab5c7543.396ENSIPUG00000024622rab357943.396
ENSIPUG00000020082rab5c7932.544ENSIPUG00000004259kras8932.544
ENSIPUG00000020082rab5c7642.593ENSIPUG00000012509-7442.593
ENSIPUG00000020082rab5c5630.645ENSIPUG00000021761arl8bb6330.645
ENSIPUG00000020082rab5c8131.609ENSIPUG00000022502hrasb9131.609
ENSIPUG00000020082rab5c7841.860ENSIPUG00000017200-8341.860
ENSIPUG00000020082rab5c7633.533ENSIPUG00000009784-8833.505
ENSIPUG00000020082rab5c7942.262ENSIPUG00000007539rab2a9640.196
ENSIPUG00000020082rab5c9244.670ENSIPUG00000020508rab1ab9644.670
ENSIPUG00000020082rab5c7639.759ENSIPUG00000022394zgc:1015597239.759
ENSIPUG00000020082rab5c7633.333ENSIPUG00000016561rab9b7333.333
ENSIPUG00000020082rab5c8044.000ENSIPUG00000007246rab7a8544.000
ENSIPUG00000020082rab5c7743.558ENSIPUG00000018098rab6b8043.373
ENSIPUG00000020082rab5c7635.976ENSIPUG00000011376rab42a7735.976
ENSIPUG00000020082rab5c9244.670ENSIPUG00000008650rab1a9644.670
ENSIPUG00000020082rab5c7844.578ENSIPUG00000021740rab6a8044.578
ENSIPUG00000020082rab5c9236.410ENSIPUG00000011489Rab359636.410
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000020082rab5c9888.532ENSG00000108774RAB5C9591.525Homo_sapiens
ENSIPUG00000020082rab5c10093.243ENSAPOG00000016864rab5c9592.823Acanthochromis_polyacanthus
ENSIPUG00000020082rab5c9888.532ENSAMEG00000006003RAB5C9687.619Ailuropoda_melanoleuca
ENSIPUG00000020082rab5c10094.144ENSACIG00000010896rab5c9794.737Amphilophus_citrinellus
ENSIPUG00000020082rab5c10093.243ENSAOCG00000016614rab5c9592.823Amphiprion_ocellaris
ENSIPUG00000020082rab5c9892.823ENSAPEG00000017868-9692.823Amphiprion_percula
ENSIPUG00000020082rab5c9994.521ENSATEG00000001937rab5c9296.500Anabas_testudineus
ENSIPUG00000020082rab5c9389.855ENSANAG00000025390RAB5C9789.447Aotus_nancymaae
ENSIPUG00000020082rab5c10093.243ENSACLG00000002706rab5c9593.780Astatotilapia_calliptera
ENSIPUG00000020082rab5c9985.981ENSACLG00000008615-9685.981Astatotilapia_calliptera
ENSIPUG00000020082rab5c9789.100ENSAMXG00000037267-10089.100Astyanax_mexicanus
ENSIPUG00000020082rab5c10095.946ENSAMXG00000043717rab5c10095.946Astyanax_mexicanus
ENSIPUG00000020082rab5c9888.073ENSBTAG00000006982RAB5C9687.143Bos_taurus
ENSIPUG00000020082rab5c9875.342WBGene00004268rab-59278.894Caenorhabditis_elegans
ENSIPUG00000020082rab5c9888.532ENSCAFG00000015629RAB5C9687.619Canis_familiaris
ENSIPUG00000020082rab5c9888.532ENSCAFG00020013537RAB5C9687.619Canis_lupus_dingo
ENSIPUG00000020082rab5c9888.073ENSCHIG00000012960RAB5C9687.143Capra_hircus
ENSIPUG00000020082rab5c9888.532ENSTSYG00000030531RAB5C9687.619Carlito_syrichta
ENSIPUG00000020082rab5c9888.073ENSCCAG00000025940RAB5C9687.619Cebus_capucinus
ENSIPUG00000020082rab5c9888.532ENSCATG00000040873RAB5C9687.619Cercocebus_atys
ENSIPUG00000020082rab5c9888.532ENSCLAG00000016650RAB5C9587.500Chinchilla_lanigera
ENSIPUG00000020082rab5c8193.333ENSCHOG00000009886RAB5C9793.023Choloepus_hoffmanni
ENSIPUG00000020082rab5c9975.234ENSCING00000003340-9775.234Ciona_intestinalis
ENSIPUG00000020082rab5c9974.336ENSCSAVG00000000613-8988.966Ciona_savignyi
ENSIPUG00000020082rab5c9888.532ENSCGRG00001014226Rab5c9687.619Cricetulus_griseus_chok1gshd
ENSIPUG00000020082rab5c9888.532ENSCGRG00000007534Rab5c9687.619Cricetulus_griseus_crigri
ENSIPUG00000020082rab5c10091.892ENSCSEG00000017024rab5c9592.344Cynoglossus_semilaevis
ENSIPUG00000020082rab5c10093.694ENSCVAG00000009550rab5c9593.301Cyprinodon_variegatus
ENSIPUG00000020082rab5c9888.073ENSDNOG00000038853RAB5C9687.619Dasypus_novemcinctus
ENSIPUG00000020082rab5c9889.450ENSDORG00000006819Rab5c9588.462Dipodomys_ordii
ENSIPUG00000020082rab5c9076.000FBgn0014010Rab58876.562Drosophila_melanogaster
ENSIPUG00000020082rab5c8981.818ENSEBUG00000014794rab5c8783.243Eptatretus_burgeri
ENSIPUG00000020082rab5c9888.532ENSEASG00005009281RAB5C9687.619Equus_asinus_asinus
ENSIPUG00000020082rab5c9888.532ENSECAG00000025054RAB5C9687.619Equus_caballus
ENSIPUG00000020082rab5c9888.073ENSEEUG00000002790RAB5C9687.143Erinaceus_europaeus
ENSIPUG00000020082rab5c10090.090ENSELUG00000010439-9590.431Esox_lucius
ENSIPUG00000020082rab5c9892.202ENSELUG00000018516rab5c9293.970Esox_lucius
ENSIPUG00000020082rab5c9888.073ENSFCAG00000002148RAB5C9687.143Felis_catus
ENSIPUG00000020082rab5c9887.615ENSFDAG00000021541RAB5C9686.667Fukomys_damarensis
ENSIPUG00000020082rab5c10094.595ENSFHEG00000012117rab5c9594.258Fundulus_heteroclitus
ENSIPUG00000020082rab5c9989.593ENSFHEG00000015268-9687.736Fundulus_heteroclitus
ENSIPUG00000020082rab5c7788.344ENSGMOG00000001876-9390.062Gadus_morhua
ENSIPUG00000020082rab5c10092.342ENSGMOG00000015096rab5c9591.866Gadus_morhua
ENSIPUG00000020082rab5c10094.595ENSGAFG00000000884rab5c9594.258Gambusia_affinis
ENSIPUG00000020082rab5c9589.573ENSGAFG00000003642-9686.854Gambusia_affinis
ENSIPUG00000020082rab5c10089.640ENSGACG00000008659rab5c9390.732Gasterosteus_aculeatus
ENSIPUG00000020082rab5c9888.532ENSGGOG00000005472RAB5C9687.619Gorilla_gorilla
ENSIPUG00000020082rab5c10093.243ENSHBUG00000002014rab5c9593.780Haplochromis_burtoni
ENSIPUG00000020082rab5c9985.981ENSHBUG00000006823-9685.981Haplochromis_burtoni
ENSIPUG00000020082rab5c9887.615ENSHGLG00000012067RAB5C9687.143Heterocephalus_glaber_female
ENSIPUG00000020082rab5c9581.043ENSHCOG00000020238-9677.727Hippocampus_comes
ENSIPUG00000020082rab5c10094.144ENSHCOG00000004662rab5c9196.059Hippocampus_comes
ENSIPUG00000020082rab5c9887.783ENSSTOG00000006620RAB5C9686.854Ictidomys_tridecemlineatus
ENSIPUG00000020082rab5c9888.532ENSJJAG00000021181Rab5c9687.619Jaculus_jaculus
ENSIPUG00000020082rab5c9989.140ENSKMAG00000017417-9588.571Kryptolebias_marmoratus
ENSIPUG00000020082rab5c10094.144ENSKMAG00000020038rab5c9593.780Kryptolebias_marmoratus
ENSIPUG00000020082rab5c10090.583ENSLBEG00000010408-9689.151Labrus_bergylta
ENSIPUG00000020082rab5c10095.045ENSLBEG00000004128rab5c9594.737Labrus_bergylta
ENSIPUG00000020082rab5c9889.908ENSLOCG00000012566rab5c9590.244Lepisosteus_oculatus
ENSIPUG00000020082rab5c9888.532ENSMFAG00000039627RAB5C9787.619Macaca_fascicularis
ENSIPUG00000020082rab5c9888.532ENSMNEG00000000355RAB5C9687.619Macaca_nemestrina
ENSIPUG00000020082rab5c10094.144ENSMAMG00000022322rab5c9594.737Mastacembelus_armatus
ENSIPUG00000020082rab5c9990.498ENSMAMG00000016207-9490.338Mastacembelus_armatus
ENSIPUG00000020082rab5c10093.243ENSMZEG00005022735rab5c9593.780Maylandia_zebra
ENSIPUG00000020082rab5c9985.981ENSMZEG00005021090-9685.981Maylandia_zebra
ENSIPUG00000020082rab5c9888.532ENSMAUG00000015005Rab5c9687.619Mesocricetus_auratus
ENSIPUG00000020082rab5c9888.532ENSMICG00000041608RAB5C9687.619Microcebus_murinus
ENSIPUG00000020082rab5c9888.532ENSMOCG00000018531-9687.619Microtus_ochrogaster
ENSIPUG00000020082rab5c10093.694ENSMMOG00000020621rab5c9593.780Mola_mola
ENSIPUG00000020082rab5c9888.018ENSMALG00000006052rab5c9587.560Monopterus_albus
ENSIPUG00000020082rab5c9987.783ENSMALG00000022348-9487.923Monopterus_albus
ENSIPUG00000020082rab5c9888.532MGP_CAROLIEiJ_G0017184Rab5c9687.619Mus_caroli
ENSIPUG00000020082rab5c9888.532ENSMUSG00000019173Rab5c9687.619Mus_musculus
ENSIPUG00000020082rab5c9888.532MGP_PahariEiJ_G0018314Rab5c9687.619Mus_pahari
ENSIPUG00000020082rab5c9888.532MGP_SPRETEiJ_G0018027Rab5c9687.619Mus_spretus
ENSIPUG00000020082rab5c9888.532ENSMPUG00000010554RAB5C9687.619Mustela_putorius_furo
ENSIPUG00000020082rab5c9888.532ENSNGAG00000010286Rab5c9587.981Nannospalax_galili
ENSIPUG00000020082rab5c10093.694ENSNBRG00000018165rab5c9594.258Neolamprologus_brichardi
ENSIPUG00000020082rab5c9985.981ENSNBRG00000016922-9685.981Neolamprologus_brichardi
ENSIPUG00000020082rab5c8186.667ENSOPRG00000008255RAB5C9785.465Ochotona_princeps
ENSIPUG00000020082rab5c9888.073ENSODEG00000017920RAB5C9587.500Octodon_degus
ENSIPUG00000020082rab5c10093.694ENSONIG00000001113rab5c9594.258Oreochromis_niloticus
ENSIPUG00000020082rab5c9993.151ENSORLG00000003882rab5c9295.000Oryzias_latipes
ENSIPUG00000020082rab5c9993.151ENSORLG00020008388rab5c9295.000Oryzias_latipes_hni
ENSIPUG00000020082rab5c9993.151ENSORLG00015021900rab5c9295.000Oryzias_latipes_hsok
ENSIPUG00000020082rab5c9993.151ENSOMEG00000023078rab5c9295.000Oryzias_melastigma
ENSIPUG00000020082rab5c9888.991ENSOGAG00000009456RAB5C9587.981Otolemur_garnettii
ENSIPUG00000020082rab5c9888.073ENSOARG00000018768RAB5C9687.143Ovis_aries
ENSIPUG00000020082rab5c9888.532ENSPPAG00000037206RAB5C9687.619Pan_paniscus
ENSIPUG00000020082rab5c9888.073ENSPPRG00000005745RAB5C9687.143Panthera_pardus
ENSIPUG00000020082rab5c9888.073ENSPTIG00000008177RAB5C9687.143Panthera_tigris_altaica
ENSIPUG00000020082rab5c9888.532ENSPTRG00000009194RAB5C9787.619Pan_troglodytes
ENSIPUG00000020082rab5c9886.697ENSPKIG00000020112-9288.442Paramormyrops_kingsleyae
ENSIPUG00000020082rab5c9886.697ENSPKIG00000001237-9289.950Paramormyrops_kingsleyae
ENSIPUG00000020082rab5c10091.441ENSPMGG00000010792rab5c9495.074Periophthalmus_magnuspinnatus
ENSIPUG00000020082rab5c9888.532ENSPEMG00000017971Rab5c9687.619Peromyscus_maniculatus_bairdii
ENSIPUG00000020082rab5c9879.186ENSPMAG00000000008rab5c9080.597Petromyzon_marinus
ENSIPUG00000020082rab5c9974.886ENSPMAG00000001399rab5c9874.057Petromyzon_marinus
ENSIPUG00000020082rab5c9874.886ENSPMAG00000007867rab5c9774.408Petromyzon_marinus
ENSIPUG00000020082rab5c9888.991ENSPCIG00000020225-9788.152Phascolarctos_cinereus
ENSIPUG00000020082rab5c9988.688ENSPLAG00000016333-9787.264Poecilia_latipinna
ENSIPUG00000020082rab5c10094.595ENSPLAG00000004790rab5c9594.258Poecilia_latipinna
ENSIPUG00000020082rab5c10094.595ENSPMEG00000011336rab5c9594.258Poecilia_mexicana
ENSIPUG00000020082rab5c9689.767ENSPMEG00000012614-9787.037Poecilia_mexicana
ENSIPUG00000020082rab5c10094.595ENSPREG00000010146rab5c9594.258Poecilia_reticulata
ENSIPUG00000020082rab5c8889.286ENSPREG00000022167-8791.716Poecilia_reticulata
ENSIPUG00000020082rab5c9888.532ENSPPYG00000008398RAB5C9687.619Pongo_abelii
ENSIPUG00000020082rab5c9887.156ENSPCAG00000016412RAB5C9686.667Procavia_capensis
ENSIPUG00000020082rab5c9888.073ENSPCOG00000026327RAB5C9687.619Propithecus_coquereli
ENSIPUG00000020082rab5c9888.532ENSPVAG00000003867RAB5C9687.619Pteropus_vampyrus
ENSIPUG00000020082rab5c9985.981ENSPNYG00000015851-9685.981Pundamilia_nyererei
ENSIPUG00000020082rab5c10093.243ENSPNYG00000010615rab5c9593.780Pundamilia_nyererei
ENSIPUG00000020082rab5c9886.792ENSPNAG00000002218-9986.792Pygocentrus_nattereri
ENSIPUG00000020082rab5c10095.495ENSPNAG00000028138rab5c9298.030Pygocentrus_nattereri
ENSIPUG00000020082rab5c9888.532ENSRNOG00000018568Rab5c9687.619Rattus_norvegicus
ENSIPUG00000020082rab5c9888.532ENSRBIG00000031376RAB5C9687.619Rhinopithecus_bieti
ENSIPUG00000020082rab5c9888.532ENSRROG00000032895RAB5C9687.619Rhinopithecus_roxellana
ENSIPUG00000020082rab5c9888.073ENSSBOG00000032552-9687.619Saimiri_boliviensis_boliviensis
ENSIPUG00000020082rab5c9889.450ENSSHAG00000005267-9688.571Sarcophilus_harrisii
ENSIPUG00000020082rab5c10085.586ENSSFOG00015009988-9288.177Scleropages_formosus
ENSIPUG00000020082rab5c9593.839ENSSMAG00000007323rab5c9593.301Scophthalmus_maximus
ENSIPUG00000020082rab5c10094.144ENSSDUG00000023008rab5c9593.780Seriola_dumerili
ENSIPUG00000020082rab5c10093.243ENSSLDG00000017771rab5c9592.823Seriola_lalandi_dorsalis
ENSIPUG00000020082rab5c9888.532ENSSPUG00000012950-9687.619Sphenodon_punctatus
ENSIPUG00000020082rab5c10095.045ENSSPAG00000006436rab5c9594.737Stegastes_partitus
ENSIPUG00000020082rab5c9888.073ENSSSCG00000032467RAB5C9687.143Sus_scrofa
ENSIPUG00000020082rab5c10094.595ENSTRUG00000015590rab5c9593.780Takifugu_rubripes
ENSIPUG00000020082rab5c9794.686ENSTNIG00000011711rab5c9595.755Tetraodon_nigroviridis
ENSIPUG00000020082rab5c9888.991ENSTBEG00000007092RAB5C9688.095Tupaia_belangeri
ENSIPUG00000020082rab5c9887.615ENSTTRG00000006673RAB5C9686.667Tursiops_truncatus
ENSIPUG00000020082rab5c9888.532ENSUAMG00000024343RAB5C9687.619Ursus_americanus
ENSIPUG00000020082rab5c9888.532ENSUMAG00000023270RAB5C9687.619Ursus_maritimus
ENSIPUG00000020082rab5c10094.144ENSXCOG00000016788rab5c9793.780Xiphophorus_couchianus
ENSIPUG00000020082rab5c9590.047ENSXCOG00000006300-9686.512Xiphophorus_couchianus
ENSIPUG00000020082rab5c10094.595ENSXMAG00000003266rab5c9594.258Xiphophorus_maculatus
ENSIPUG00000020082rab5c9988.235ENSXMAG00000022179-9786.792Xiphophorus_maculatus

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