EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000020250 (Gene tree)
Gene ID: 108258033
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 24199 bases
Position: chr25:3321258-3345456
Accession: 108258033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030007	PARP	PF00644.20	3.6e-73	1	1
ENSIPUP00000030039	PARP	PF00644.20	9.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031217	-	4264	XM_017456263	ENSIPUP00000030007	1018 (aa)	XP_017311752	A0A2D0Q0E8
ENSIPUT00000031251	-	4111	-	ENSIPUP00000030039	967 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000020250's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03410	Base excision repair	KEGG
ipu04210	Apoptosis	KEGG
ipu04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020250	parp1	99	69.336	ENSG00000143799	PARP1	100	68.738	Homo_sapiens
ENSIPUG00000020250	parp1	100	81.543	ENSAPOG00000006414	parp1	100	81.543	Acanthochromis_polyacanthus
ENSIPUG00000020250	parp1	99	68.775	ENSAMEG00000014451	PARP1	100	67.972	Ailuropoda_melanoleuca
ENSIPUG00000020250	parp1	100	82.600	ENSACIG00000005651	parp1	100	81.792	Amphilophus_citrinellus
ENSIPUG00000020250	parp1	100	82.031	ENSAOCG00000021005	parp1	100	82.031	Amphiprion_ocellaris
ENSIPUG00000020250	parp1	100	81.934	ENSAPEG00000004784	parp1	100	81.934	Amphiprion_percula
ENSIPUG00000020250	parp1	100	81.036	ENSATEG00000010457	parp1	100	80.859	Anabas_testudineus
ENSIPUG00000020250	parp1	87	72.085	ENSAPLG00000014039	PARP1	99	71.637	Anas_platyrhynchos
ENSIPUG00000020250	parp1	99	71.009	ENSACAG00000006189	PARP1	99	70.813	Anolis_carolinensis
ENSIPUG00000020250	parp1	99	68.555	ENSANAG00000032699	PARP1	100	68.641	Aotus_nancymaae
ENSIPUG00000020250	parp1	100	82.796	ENSACLG00000015489	parp1	100	82.405	Astatotilapia_calliptera
ENSIPUG00000020250	parp1	100	87.634	ENSAMXG00000006465	parp1	100	87.342	Astyanax_mexicanus
ENSIPUG00000020250	parp1	100	66.570	ENSBTAG00000000837	PARP1	100	66.085	Bos_taurus
ENSIPUG00000020250	parp1	81	43.625	WBGene00004049	parp-1	100	45.211	Caenorhabditis_elegans
ENSIPUG00000020250	parp1	99	67.969	ENSCJAG00000012831	PARP1	100	67.961	Callithrix_jacchus
ENSIPUG00000020250	parp1	96	68.389	ENSCAFG00000016089	PARP1	100	67.781	Canis_familiaris
ENSIPUG00000020250	parp1	100	68.835	ENSCAFG00020001660	PARP1	100	68.252	Canis_lupus_dingo
ENSIPUG00000020250	parp1	100	66.957	ENSCHIG00000018072	PARP1	100	66.860	Capra_hircus
ENSIPUG00000020250	parp1	99	69.589	ENSTSYG00000003699	PARP1	99	69.264	Carlito_syrichta
ENSIPUG00000020250	parp1	99	57.215	ENSCAPG00000011113	-	99	56.926	Cavia_aperea
ENSIPUG00000020250	parp1	100	68.902	ENSCPOG00000015643	-	100	68.641	Cavia_porcellus
ENSIPUG00000020250	parp1	99	68.359	ENSCCAG00000033484	PARP1	100	68.058	Cebus_capucinus
ENSIPUG00000020250	parp1	99	68.457	ENSCATG00000038981	PARP1	100	67.864	Cercocebus_atys
ENSIPUG00000020250	parp1	99	68.555	ENSCLAG00000006637	PARP1	99	68.652	Chinchilla_lanigera
ENSIPUG00000020250	parp1	69	78.125	ENSCHOG00000003539	PARP1	66	78.125	Choloepus_hoffmanni
ENSIPUG00000020250	parp1	99	71.750	ENSCPBG00000011958	PARP1	99	71.233	Chrysemys_picta_bellii
ENSIPUG00000020250	parp1	99	67.745	ENSCANG00000041340	PARP1	100	67.341	Colobus_angolensis_palliatus
ENSIPUG00000020250	parp1	100	68.319	ENSCGRG00001020559	Parp1	100	68.610	Cricetulus_griseus_chok1gshd
ENSIPUG00000020250	parp1	99	68.016	ENSCGRG00000004864	Parp1	100	68.320	Cricetulus_griseus_crigri
ENSIPUG00000020250	parp1	100	80.488	ENSCSEG00000020665	parp1	100	87.349	Cynoglossus_semilaevis
ENSIPUG00000020250	parp1	99	81.073	ENSCVAG00000021372	parp1	99	81.073	Cyprinodon_variegatus
ENSIPUG00000020250	parp1	100	85.896	ENSDARG00000019529	parp1	100	85.406	Danio_rerio
ENSIPUG00000020250	parp1	99	66.937	ENSDNOG00000012059	PARP1	100	66.937	Dasypus_novemcinctus
ENSIPUG00000020250	parp1	99	66.802	ENSDORG00000005234	Parp1	100	67.004	Dipodomys_ordii
ENSIPUG00000020250	parp1	99	41.478	FBgn0010247	Parp	99	41.281	Drosophila_melanogaster
ENSIPUG00000020250	parp1	92	78.906	ENSETEG00000013254	PARP1	88	78.906	Echinops_telfairi
ENSIPUG00000020250	parp1	99	57.853	ENSEBUG00000005820	parp1	100	57.654	Eptatretus_burgeri
ENSIPUG00000020250	parp1	98	67.793	ENSEASG00005013275	PARP1	99	67.917	Equus_asinus_asinus
ENSIPUG00000020250	parp1	99	68.359	ENSECAG00000019207	PARP1	100	68.350	Equus_caballus
ENSIPUG00000020250	parp1	100	65.795	ENSEEUG00000012253	PARP1	100	65.988	Erinaceus_europaeus
ENSIPUG00000020250	parp1	99	81.601	ENSELUG00000017336	parp1	100	79.961	Esox_lucius
ENSIPUG00000020250	parp1	97	67.839	ENSFCAG00000005777	PARP1	100	68.040	Felis_catus
ENSIPUG00000020250	parp1	99	72.138	ENSFALG00000011578	PARP1	100	71.631	Ficedula_albicollis
ENSIPUG00000020250	parp1	99	67.037	ENSFDAG00000017662	PARP1	100	67.037	Fukomys_damarensis
ENSIPUG00000020250	parp1	100	81.854	ENSFHEG00000001117	parp1	100	81.951	Fundulus_heteroclitus
ENSIPUG00000020250	parp1	99	79.240	ENSGMOG00000014929	parp1	100	78.947	Gadus_morhua
ENSIPUG00000020250	parp1	99	73.190	ENSGALG00000009228	PARP1	99	73.288	Gallus_gallus
ENSIPUG00000020250	parp1	100	81.268	ENSGAFG00000010450	parp1	100	81.561	Gambusia_affinis
ENSIPUG00000020250	parp1	100	81.287	ENSGACG00000011280	parp1	100	80.702	Gasterosteus_aculeatus
ENSIPUG00000020250	parp1	99	71.429	ENSGAGG00000010066	PARP1	99	71.009	Gopherus_agassizii
ENSIPUG00000020250	parp1	99	69.043	ENSGGOG00000006308	PARP1	100	68.544	Gorilla_gorilla
ENSIPUG00000020250	parp1	100	83.203	ENSHBUG00000010490	parp1	100	82.812	Haplochromis_burtoni
ENSIPUG00000020250	parp1	96	67.374	ENSHGLG00000003992	PARP1	93	67.374	Heterocephalus_glaber_female
ENSIPUG00000020250	parp1	96	67.374	ENSHGLG00100016965	PARP1	93	67.374	Heterocephalus_glaber_male
ENSIPUG00000020250	parp1	100	78.814	ENSHCOG00000011619	parp1	100	79.320	Hippocampus_comes
ENSIPUG00000020250	parp1	100	68.835	ENSSTOG00000016000	PARP1	100	68.835	Ictidomys_tridecemlineatus
ENSIPUG00000020250	parp1	100	68.999	ENSJJAG00000023497	Parp1	100	68.895	Jaculus_jaculus
ENSIPUG00000020250	parp1	100	81.463	ENSKMAG00000011627	parp1	100	81.171	Kryptolebias_marmoratus
ENSIPUG00000020250	parp1	100	81.818	ENSLBEG00000013376	parp1	100	81.818	Labrus_bergylta
ENSIPUG00000020250	parp1	99	55.116	ENSLACG00000002735	PARP1	99	55.996	Latimeria_chalumnae
ENSIPUG00000020250	parp1	100	80.976	ENSLOCG00000015798	parp1	100	80.976	Lepisosteus_oculatus
ENSIPUG00000020250	parp1	99	66.936	ENSLAFG00000007830	PARP1	100	66.633	Loxodonta_africana
ENSIPUG00000020250	parp1	99	68.555	ENSMFAG00000002526	PARP1	100	67.961	Macaca_fascicularis
ENSIPUG00000020250	parp1	99	68.555	ENSMMUG00000021820	PARP1	100	67.961	Macaca_mulatta
ENSIPUG00000020250	parp1	99	68.555	ENSMNEG00000034074	PARP1	100	67.961	Macaca_nemestrina
ENSIPUG00000020250	parp1	99	66.504	ENSMLEG00000012344	PARP1	100	66.505	Mandrillus_leucophaeus
ENSIPUG00000020250	parp1	100	81.836	ENSMAMG00000020652	parp1	100	81.934	Mastacembelus_armatus
ENSIPUG00000020250	parp1	100	83.496	ENSMZEG00005016907	parp1	100	83.105	Maylandia_zebra
ENSIPUG00000020250	parp1	99	72.856	ENSMGAG00000007760	PARP1	100	72.948	Meleagris_gallopavo
ENSIPUG00000020250	parp1	100	68.513	ENSMAUG00000008306	Parp1	100	68.610	Mesocricetus_auratus
ENSIPUG00000020250	parp1	99	66.082	ENSMICG00000017076	PARP1	99	65.918	Microcebus_murinus
ENSIPUG00000020250	parp1	100	68.805	ENSMOCG00000014315	Parp1	100	68.513	Microtus_ochrogaster
ENSIPUG00000020250	parp1	100	80.156	ENSMMOG00000015966	parp1	100	80.350	Mola_mola
ENSIPUG00000020250	parp1	99	68.622	ENSMODG00000006076	PARP1	99	68.719	Monodelphis_domestica
ENSIPUG00000020250	parp1	100	79.004	ENSMALG00000004057	parp1	100	79.395	Monopterus_albus
ENSIPUG00000020250	parp1	100	68.380	MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	Mus_caroli
ENSIPUG00000020250	parp1	100	68.283	ENSMUSG00000026496	Parp1	99	76.531	Mus_musculus
ENSIPUG00000020250	parp1	100	68.283	MGP_SPRETEiJ_G0015777	Parp1	100	76.531	Mus_spretus
ENSIPUG00000020250	parp1	99	69.238	ENSMPUG00000004585	PARP1	100	68.641	Mustela_putorius_furo
ENSIPUG00000020250	parp1	90	59.208	ENSMLUG00000012285	PARP1	82	77.209	Myotis_lucifugus
ENSIPUG00000020250	parp1	100	68.252	ENSNGAG00000003885	Parp1	100	68.124	Nannospalax_galili
ENSIPUG00000020250	parp1	100	82.600	ENSNBRG00000017434	parp1	100	82.209	Neolamprologus_brichardi
ENSIPUG00000020250	parp1	95	74.876	ENSNLEG00000013905	PARP1	100	74.876	Nomascus_leucogenys
ENSIPUG00000020250	parp1	67	80.299	ENSMEUG00000007720	PARP1	87	80.299	Notamacropus_eugenii
ENSIPUG00000020250	parp1	99	69.629	ENSOPRG00000011722	PARP1	100	69.320	Ochotona_princeps
ENSIPUG00000020250	parp1	99	68.293	ENSODEG00000007424	PARP1	100	67.476	Octodon_degus
ENSIPUG00000020250	parp1	100	82.812	ENSONIG00000013486	parp1	100	82.910	Oreochromis_niloticus
ENSIPUG00000020250	parp1	99	69.939	ENSOANG00000001488	PARP1	100	70.344	Ornithorhynchus_anatinus
ENSIPUG00000020250	parp1	99	69.854	ENSOCUG00000017820	PARP1	100	69.738	Oryctolagus_cuniculus
ENSIPUG00000020250	parp1	100	80.176	ENSORLG00000013691	parp1	100	80.195	Oryzias_latipes
ENSIPUG00000020250	parp1	99	79.717	ENSORLG00020001074	parp1	99	79.738	Oryzias_latipes_hni
ENSIPUG00000020250	parp1	100	80.273	ENSORLG00015007090	parp1	100	80.293	Oryzias_latipes_hsok
ENSIPUG00000020250	parp1	100	69.029	ENSOGAG00000016206	PARP1	100	68.544	Otolemur_garnettii
ENSIPUG00000020250	parp1	100	66.860	ENSOARG00000000811	PARP1	100	66.764	Ovis_aries
ENSIPUG00000020250	parp1	99	68.945	ENSPPAG00000040862	PARP1	100	68.350	Pan_paniscus
ENSIPUG00000020250	parp1	96	67.947	ENSPPRG00000003528	PARP1	100	67.745	Panthera_pardus
ENSIPUG00000020250	parp1	93	58.088	ENSPTIG00000009102	PARP1	98	58.021	Panthera_tigris_altaica
ENSIPUG00000020250	parp1	99	68.945	ENSPTRG00000002049	PARP1	100	68.350	Pan_troglodytes
ENSIPUG00000020250	parp1	100	68.380	ENSPANG00000011198	PARP1	100	67.992	Papio_anubis
ENSIPUG00000020250	parp1	100	81.738	ENSPKIG00000006039	parp1	100	81.623	Paramormyrops_kingsleyae
ENSIPUG00000020250	parp1	99	70.648	ENSPSIG00000016374	PARP1	100	70.445	Pelodiscus_sinensis
ENSIPUG00000020250	parp1	100	78.788	ENSPMGG00000008936	parp1	100	78.082	Periophthalmus_magnuspinnatus
ENSIPUG00000020250	parp1	100	68.707	ENSPEMG00000020230	Parp1	100	68.707	Peromyscus_maniculatus_bairdii
ENSIPUG00000020250	parp1	99	69.629	ENSPCIG00000006436	PARP1	99	69.336	Phascolarctos_cinereus
ENSIPUG00000020250	parp1	100	81.366	ENSPFOG00000002342	parp1	100	80.976	Poecilia_formosa
ENSIPUG00000020250	parp1	100	81.836	ENSPLAG00000000909	parp1	100	82.049	Poecilia_latipinna
ENSIPUG00000020250	parp1	100	81.951	ENSPMEG00000013979	parp1	100	82.146	Poecilia_mexicana
ENSIPUG00000020250	parp1	100	81.561	ENSPREG00000001114	parp1	100	81.854	Poecilia_reticulata
ENSIPUG00000020250	parp1	99	68.288	ENSPPYG00000000164	PARP1	100	67.882	Pongo_abelii
ENSIPUG00000020250	parp1	60	79.321	ENSPCAG00000005558	-	59	79.321	Procavia_capensis
ENSIPUG00000020250	parp1	99	69.336	ENSPCOG00000016918	PARP1	99	69.043	Propithecus_coquereli
ENSIPUG00000020250	parp1	92	78.049	ENSPVAG00000005543	PARP1	86	78.049	Pteropus_vampyrus
ENSIPUG00000020250	parp1	100	82.796	ENSPNYG00000009702	parp1	100	82.405	Pundamilia_nyererei
ENSIPUG00000020250	parp1	100	88.694	ENSPNAG00000002787	parp1	100	88.596	Pygocentrus_nattereri
ENSIPUG00000020250	parp1	100	68.252	ENSRNOG00000003084	Parp1	100	68.155	Rattus_norvegicus
ENSIPUG00000020250	parp1	99	68.359	ENSRBIG00000044893	PARP1	99	70.883	Rhinopithecus_bieti
ENSIPUG00000020250	parp1	99	68.359	ENSRROG00000029280	PARP1	99	70.883	Rhinopithecus_roxellana
ENSIPUG00000020250	parp1	99	51.823	ENSRROG00000040615	-	98	59.278	Rhinopithecus_roxellana
ENSIPUG00000020250	parp1	99	68.750	ENSSBOG00000010144	PARP1	100	68.544	Saimiri_boliviensis_boliviensis
ENSIPUG00000020250	parp1	99	68.997	ENSSHAG00000001991	PARP1	100	69.433	Sarcophilus_harrisii
ENSIPUG00000020250	parp1	100	82.829	ENSSFOG00015020017	parp1	100	83.024	Scleropages_formosus
ENSIPUG00000020250	parp1	100	81.561	ENSSMAG00000013799	parp1	100	81.348	Scophthalmus_maximus
ENSIPUG00000020250	parp1	100	82.910	ENSSDUG00000016626	parp1	100	82.617	Seriola_dumerili
ENSIPUG00000020250	parp1	100	82.422	ENSSLDG00000006384	parp1	100	82.422	Seriola_lalandi_dorsalis
ENSIPUG00000020250	parp1	52	79.412	ENSSARG00000009436	-	58	79.412	Sorex_araneus
ENSIPUG00000020250	parp1	99	68.235	ENSSPUG00000007790	PARP1	100	68.324	Sphenodon_punctatus
ENSIPUG00000020250	parp1	100	80.078	ENSSPAG00000019074	parp1	100	82.002	Stegastes_partitus
ENSIPUG00000020250	parp1	99	68.359	ENSSSCG00000023660	PARP1	100	67.864	Sus_scrofa
ENSIPUG00000020250	parp1	98	71.601	ENSTGUG00000004260	-	100	71.053	Taeniopygia_guttata
ENSIPUG00000020250	parp1	100	80.059	ENSTRUG00000014490	parp1	100	80.059	Takifugu_rubripes
ENSIPUG00000020250	parp1	100	80.698	ENSTNIG00000016384	parp1	100	79.825	Tetraodon_nigroviridis
ENSIPUG00000020250	parp1	86	74.669	ENSTBEG00000002364	PARP1	92	78.138	Tupaia_belangeri
ENSIPUG00000020250	parp1	100	63.786	ENSTTRG00000000188	PARP1	100	63.883	Tursiops_truncatus
ENSIPUG00000020250	parp1	99	68.485	ENSUAMG00000014388	PARP1	100	67.980	Ursus_americanus
ENSIPUG00000020250	parp1	96	61.546	ENSUMAG00000014555	PARP1	99	61.500	Ursus_maritimus
ENSIPUG00000020250	parp1	83	79.608	ENSVPAG00000011411	PARP1	83	79.608	Vicugna_pacos
ENSIPUG00000020250	parp1	96	67.680	ENSVVUG00000001655	PARP1	100	67.781	Vulpes_vulpes
ENSIPUG00000020250	parp1	98	71.060	ENSXETG00000022610	parp1	99	69.882	Xenopus_tropicalis
ENSIPUG00000020250	parp1	100	81.171	ENSXMAG00000003632	parp1	100	81.366	Xiphophorus_maculatus