EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000020344 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5179 bases
Position: chr25:14534116-14539294
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030104	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031318	-	891	-	ENSIPUP00000030104	161 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000020344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000020344	-	79	30.370	ENSIPUG00000010794	rab22a	65	30.370
ENSIPUG00000020344	-	100	43.636	ENSIPUG00000006168	arl5b	98	43.478
ENSIPUG00000020344	-	97	45.062	ENSIPUG00000006298	-	84	45.062
ENSIPUG00000020344	-	98	68.519	ENSIPUG00000011737	arf1	90	68.519
ENSIPUG00000020344	-	96	70.130	ENSIPUG00000006311	arf1	86	70.130
ENSIPUG00000020344	-	90	44.079	ENSIPUG00000021618	arl4ab	79	44.079
ENSIPUG00000020344	-	100	41.818	ENSIPUG00000023232	arl5c	92	41.818
ENSIPUG00000020344	-	81	36.842	ENSIPUG00000020925	sar1b	66	36.842
ENSIPUG00000020344	-	98	67.722	ENSIPUG00000000108	Arf2	87	67.722
ENSIPUG00000020344	-	97	44.444	ENSIPUG00000002122	arl4cb	84	44.444
ENSIPUG00000020344	-	98	44.304	ENSIPUG00000021388	arl5a	90	45.333
ENSIPUG00000020344	-	81	36.090	ENSIPUG00000010046	sar1b	65	41.053
ENSIPUG00000020344	-	91	47.973	ENSIPUG00000003931	arl2	80	47.973
ENSIPUG00000020344	-	98	68.987	ENSIPUG00000023431	arf3b	87	68.987
ENSIPUG00000020344	-	94	48.026	ENSIPUG00000008227	arl3	84	48.026
ENSIPUG00000020344	-	96	61.688	ENSIPUG00000006913	-	60	61.688
ENSIPUG00000020344	-	94	48.684	ENSIPUG00000015451	arl3	87	48.684
ENSIPUG00000020344	-	98	66.879	ENSIPUG00000007016	arf4	87	66.879
ENSIPUG00000020344	-	86	30.201	ENSIPUG00000004177	srprb	56	30.201
ENSIPUG00000020344	-	70	30.579	ENSIPUG00000008650	rab1a	58	30.579
ENSIPUG00000020344	-	94	33.540	ENSIPUG00000024487	arfrp1	80	33.540
ENSIPUG00000020344	-	87	41.135	ENSIPUG00000021761	arl8bb	76	41.135
ENSIPUG00000020344	-	94	45.963	ENSIPUG00000024159	arl4a	81	45.963
ENSIPUG00000020344	-	99	40.116	ENSIPUG00000019342	Arl4d	86	40.116
ENSIPUG00000020344	-	86	36.424	ENSIPUG00000024239	ARL6	87	36.424
ENSIPUG00000020344	-	93	47.020	ENSIPUG00000019792	arl3l1	81	47.020
ENSIPUG00000020344	-	98	64.968	ENSIPUG00000004159	Arf5	87	64.968
ENSIPUG00000020344	-	79	30.827	ENSIPUG00000003199	rab13	66	30.827
ENSIPUG00000020344	-	98	54.777	ENSIPUG00000013834	arl1	84	54.777
ENSIPUG00000020344	-	81	39.098	ENSIPUG00000024669	SAR1B	70	42.105
ENSIPUG00000020344	-	98	64.331	ENSIPUG00000004215	arf5	87	64.331
ENSIPUG00000020344	-	91	43.537	ENSIPUG00000020426	arl11	82	43.537
ENSIPUG00000020344	-	98	68.987	ENSIPUG00000007829	arf3a	87	68.987
ENSIPUG00000020344	-	89	38.194	ENSIPUG00000000931	arl8ba	77	38.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020344	-	93	99.333	ENSATEG00000000391	-	93	99.333	Anabas_testudineus
ENSIPUG00000020344	-	93	99.333	ENSACLG00000022869	-	95	99.333	Astatotilapia_calliptera
ENSIPUG00000020344	-	86	100.000	ENSELUG00000000436	-	87	100.000	Esox_lucius
ENSIPUG00000020344	-	92	100.000	ENSONIG00000000864	-	94	100.000	Oreochromis_niloticus
ENSIPUG00000020344	-	86	99.281	ENSORLG00015004028	-	89	99.281	Oryzias_latipes_hsok
ENSIPUG00000020344	-	92	100.000	ENSOMEG00000022678	-	91	100.000	Oryzias_melastigma
ENSIPUG00000020344	-	86	100.000	ENSPLAG00000007217	-	95	100.000	Poecilia_latipinna
ENSIPUG00000020344	-	84	95.588	ENSPMEG00000017081	-	86	95.588	Poecilia_mexicana
ENSIPUG00000020344	-	93	95.973	ENSTRUG00000020509	-	77	95.973	Takifugu_rubripes
ENSIPUG00000020344	-	87	98.571	ENSTRUG00000024749	-	100	98.571	Takifugu_rubripes
ENSIPUG00000020344	-	86	100.000	ENSXMAG00000028437	-	91	100.000	Xiphophorus_maculatus