EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000020435 (Gene tree)
Gene ID: 100304830
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 37615 bases
Position: chr4:12406353-12443967
Accession: 100304830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030310	CPSF_A	PF03178.15	6.5e-100	1	1
ENSIPUP00000030344	CPSF_A	PF03178.15	2.3e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031563	-	3624	-	ENSIPUP00000030344	1207 (aa)	-	-
ENSIPUT00000031529	-	6283	XM_017466405	ENSIPUP00000030310	1217 (aa)	XP_017321894	W5U7N2

Gene Model

Click here to download ENSIPUG00000020435's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020435	sf3b3	100	93.098	ENSG00000189091	SF3B3	100	94.737	Homo_sapiens
ENSIPUG00000020435	sf3b3	96	97.011	ENSAPOG00000006172	sf3b3	98	97.011	Acanthochromis_polyacanthus
ENSIPUG00000020435	sf3b3	100	92.951	ENSAMEG00000002187	SF3B3	100	92.951	Ailuropoda_melanoleuca
ENSIPUG00000020435	sf3b3	92	94.643	ENSACIG00000016487	sf3b3	100	94.643	Amphilophus_citrinellus
ENSIPUG00000020435	sf3b3	100	97.042	ENSAOCG00000007158	sf3b3	100	97.042	Amphiprion_ocellaris
ENSIPUG00000020435	sf3b3	100	97.042	ENSAPEG00000022786	sf3b3	100	97.042	Amphiprion_percula
ENSIPUG00000020435	sf3b3	100	97.617	ENSATEG00000013708	sf3b3	100	97.617	Anabas_testudineus
ENSIPUG00000020435	sf3b3	81	93.089	ENSAPLG00000004996	SF3B3	99	93.089	Anas_platyrhynchos
ENSIPUG00000020435	sf3b3	100	93.344	ENSACAG00000001817	SF3B3	100	93.344	Anolis_carolinensis
ENSIPUG00000020435	sf3b3	100	93.098	ENSANAG00000028001	SF3B3	100	93.098	Aotus_nancymaae
ENSIPUG00000020435	sf3b3	96	97.438	ENSACLG00000022555	sf3b3	98	97.438	Astatotilapia_calliptera
ENSIPUG00000020435	sf3b3	100	98.932	ENSAMXG00000003410	sf3b3	100	98.932	Astyanax_mexicanus
ENSIPUG00000020435	sf3b3	100	93.098	ENSBTAG00000010627	SF3B3	100	93.098	Bos_taurus
ENSIPUG00000020435	sf3b3	100	60.260	WBGene00019323	teg-4	100	60.260	Caenorhabditis_elegans
ENSIPUG00000020435	sf3b3	100	93.098	ENSCJAG00000014773	SF3B3	99	93.098	Callithrix_jacchus
ENSIPUG00000020435	sf3b3	100	93.180	ENSCAFG00000020151	SF3B3	100	93.180	Canis_familiaris
ENSIPUG00000020435	sf3b3	100	93.180	ENSCAFG00020020912	SF3B3	100	93.180	Canis_lupus_dingo
ENSIPUG00000020435	sf3b3	100	93.180	ENSCHIG00000019822	SF3B3	100	93.180	Capra_hircus
ENSIPUG00000020435	sf3b3	100	93.098	ENSTSYG00000007910	SF3B3	100	93.098	Carlito_syrichta
ENSIPUG00000020435	sf3b3	84	79.405	ENSCAPG00000001484	SF3B3	92	79.405	Cavia_aperea
ENSIPUG00000020435	sf3b3	100	91.783	ENSCPOG00000000586	SF3B3	100	91.783	Cavia_porcellus
ENSIPUG00000020435	sf3b3	100	93.098	ENSCCAG00000017736	SF3B3	100	93.098	Cebus_capucinus
ENSIPUG00000020435	sf3b3	100	93.098	ENSCATG00000036562	SF3B3	100	93.098	Cercocebus_atys
ENSIPUG00000020435	sf3b3	100	93.098	ENSCLAG00000003921	SF3B3	100	93.098	Chinchilla_lanigera
ENSIPUG00000020435	sf3b3	100	93.098	ENSCSAG00000004371	SF3B3	100	93.098	Chlorocebus_sabaeus
ENSIPUG00000020435	sf3b3	90	89.408	ENSCHOG00000001878	SF3B3	90	89.408	Choloepus_hoffmanni
ENSIPUG00000020435	sf3b3	100	93.098	ENSCPBG00000015853	SF3B3	100	93.098	Chrysemys_picta_bellii
ENSIPUG00000020435	sf3b3	100	79.557	ENSCING00000001342	-	100	79.557	Ciona_intestinalis
ENSIPUG00000020435	sf3b3	99	78.325	ENSCSAVG00000011454	-	100	78.325	Ciona_savignyi
ENSIPUG00000020435	sf3b3	100	89.565	ENSCANG00000042920	SF3B3	100	90.058	Colobus_angolensis_palliatus
ENSIPUG00000020435	sf3b3	100	93.016	ENSCGRG00001015908	Sf3b3	100	93.016	Cricetulus_griseus_chok1gshd
ENSIPUG00000020435	sf3b3	100	93.016	ENSCGRG00000010180	Sf3b3	100	93.016	Cricetulus_griseus_crigri
ENSIPUG00000020435	sf3b3	82	95.908	ENSCSEG00000014192	sf3b3	99	95.908	Cynoglossus_semilaevis
ENSIPUG00000020435	sf3b3	100	97.206	ENSCVAG00000010459	sf3b3	100	97.206	Cyprinodon_variegatus
ENSIPUG00000020435	sf3b3	100	97.535	ENSDARG00000103553	sf3b3	100	97.535	Danio_rerio
ENSIPUG00000020435	sf3b3	85	92.864	ENSDNOG00000043626	SF3B3	100	92.864	Dasypus_novemcinctus
ENSIPUG00000020435	sf3b3	100	93.098	ENSDORG00000014176	Sf3b3	100	93.098	Dipodomys_ordii
ENSIPUG00000020435	sf3b3	100	74.878	FBgn0035162	Sf3b3	100	74.878	Drosophila_melanogaster
ENSIPUG00000020435	sf3b3	84	95.359	ENSETEG00000002729	SF3B3	84	95.359	Echinops_telfairi
ENSIPUG00000020435	sf3b3	100	86.442	ENSEBUG00000006117	sf3b3	100	86.442	Eptatretus_burgeri
ENSIPUG00000020435	sf3b3	100	93.180	ENSEASG00005013376	SF3B3	100	93.180	Equus_asinus_asinus
ENSIPUG00000020435	sf3b3	100	93.180	ENSECAG00000014053	SF3B3	100	93.180	Equus_caballus
ENSIPUG00000020435	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSIPUG00000020435	sf3b3	100	96.148	ENSELUG00000015417	sf3b3	100	96.148	Esox_lucius
ENSIPUG00000020435	sf3b3	100	93.180	ENSFCAG00000009487	SF3B3	100	93.180	Felis_catus
ENSIPUG00000020435	sf3b3	100	92.851	ENSFALG00000007372	SF3B3	100	92.851	Ficedula_albicollis
ENSIPUG00000020435	sf3b3	100	93.098	ENSFDAG00000002608	SF3B3	100	93.098	Fukomys_damarensis
ENSIPUG00000020435	sf3b3	100	97.453	ENSFHEG00000017824	sf3b3	100	97.453	Fundulus_heteroclitus
ENSIPUG00000020435	sf3b3	100	93.678	ENSGMOG00000008139	sf3b3	100	93.678	Gadus_morhua
ENSIPUG00000020435	sf3b3	100	93.098	ENSGALG00000002531	SF3B3	100	93.098	Gallus_gallus
ENSIPUG00000020435	sf3b3	100	97.042	ENSGAFG00000015206	sf3b3	100	97.042	Gambusia_affinis
ENSIPUG00000020435	sf3b3	100	97.455	ENSGACG00000002646	sf3b3	100	97.455	Gasterosteus_aculeatus
ENSIPUG00000020435	sf3b3	96	93.254	ENSGAGG00000006746	SF3B3	97	93.254	Gopherus_agassizii
ENSIPUG00000020435	sf3b3	100	93.098	ENSGGOG00000003246	SF3B3	100	93.098	Gorilla_gorilla
ENSIPUG00000020435	sf3b3	92	90.625	ENSHBUG00000005960	sf3b3	100	90.625	Haplochromis_burtoni
ENSIPUG00000020435	sf3b3	100	93.098	ENSHGLG00000010135	SF3B3	100	93.098	Heterocephalus_glaber_female
ENSIPUG00000020435	sf3b3	100	90.998	ENSHGLG00100011148	SF3B3	100	90.998	Heterocephalus_glaber_male
ENSIPUG00000020435	sf3b3	100	97.042	ENSHCOG00000011981	sf3b3	100	97.042	Hippocampus_comes
ENSIPUG00000020435	sf3b3	100	93.098	ENSSTOG00000007065	SF3B3	100	93.098	Ictidomys_tridecemlineatus
ENSIPUG00000020435	sf3b3	100	93.098	ENSJJAG00000003948	Sf3b3	100	93.098	Jaculus_jaculus
ENSIPUG00000020435	sf3b3	100	95.152	ENSKMAG00000004066	sf3b3	99	97.096	Kryptolebias_marmoratus
ENSIPUG00000020435	sf3b3	100	97.124	ENSLBEG00000018302	sf3b3	100	97.124	Labrus_bergylta
ENSIPUG00000020435	sf3b3	98	90.365	ENSLACG00000012501	SF3B3	99	90.365	Latimeria_chalumnae
ENSIPUG00000020435	sf3b3	100	97.044	ENSLOCG00000007566	sf3b3	100	97.044	Lepisosteus_oculatus
ENSIPUG00000020435	sf3b3	100	93.180	ENSLAFG00000012219	SF3B3	100	93.180	Loxodonta_africana
ENSIPUG00000020435	sf3b3	100	93.098	ENSMFAG00000045487	SF3B3	100	93.098	Macaca_fascicularis
ENSIPUG00000020435	sf3b3	100	93.098	ENSMMUG00000017812	SF3B3	100	93.098	Macaca_mulatta
ENSIPUG00000020435	sf3b3	100	93.098	ENSMNEG00000033385	SF3B3	100	93.098	Macaca_nemestrina
ENSIPUG00000020435	sf3b3	100	89.565	ENSMLEG00000043891	SF3B3	100	89.565	Mandrillus_leucophaeus
ENSIPUG00000020435	sf3b3	100	97.699	ENSMAMG00000016837	sf3b3	100	97.699	Mastacembelus_armatus
ENSIPUG00000020435	sf3b3	100	97.535	ENSMZEG00005010836	sf3b3	100	97.535	Maylandia_zebra
ENSIPUG00000020435	sf3b3	89	94.635	ENSMZEG00005026015	sf3b3	99	94.635	Maylandia_zebra
ENSIPUG00000020435	sf3b3	100	93.098	ENSMGAG00000001597	SF3B3	100	93.098	Meleagris_gallopavo
ENSIPUG00000020435	sf3b3	82	75.780	ENSMAUG00000013618	Sf3b3	95	76.529	Mesocricetus_auratus
ENSIPUG00000020435	sf3b3	100	92.125	ENSMICG00000001363	SF3B3	100	92.125	Microcebus_murinus
ENSIPUG00000020435	sf3b3	100	93.016	ENSMOCG00000006108	Sf3b3	100	93.016	Microtus_ochrogaster
ENSIPUG00000020435	sf3b3	89	94.635	ENSMMOG00000002598	sf3b3	97	94.635	Mola_mola
ENSIPUG00000020435	sf3b3	100	89.080	ENSMODG00000014363	SF3B3	100	89.080	Monodelphis_domestica
ENSIPUG00000020435	sf3b3	100	97.042	ENSMALG00000008014	sf3b3	100	97.042	Monopterus_albus
ENSIPUG00000020435	sf3b3	100	93.016	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.016	Mus_caroli
ENSIPUG00000020435	sf3b3	100	93.016	ENSMUSG00000033732	Sf3b3	100	93.016	Mus_musculus
ENSIPUG00000020435	sf3b3	100	92.933	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.933	Mus_spretus
ENSIPUG00000020435	sf3b3	100	93.180	ENSMPUG00000010277	SF3B3	100	93.180	Mustela_putorius_furo
ENSIPUG00000020435	sf3b3	100	93.098	ENSMLUG00000014607	SF3B3	100	93.098	Myotis_lucifugus
ENSIPUG00000020435	sf3b3	100	93.098	ENSNGAG00000021903	Sf3b3	100	93.098	Nannospalax_galili
ENSIPUG00000020435	sf3b3	83	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSIPUG00000020435	sf3b3	100	91.626	ENSNLEG00000016127	SF3B3	100	91.626	Nomascus_leucogenys
ENSIPUG00000020435	sf3b3	92	89.008	ENSMEUG00000004479	SF3B3	94	89.008	Notamacropus_eugenii
ENSIPUG00000020435	sf3b3	98	89.858	ENSOPRG00000009847	SF3B3	100	89.858	Ochotona_princeps
ENSIPUG00000020435	sf3b3	100	93.098	ENSODEG00000014154	SF3B3	100	93.098	Octodon_degus
ENSIPUG00000020435	sf3b3	100	97.617	ENSONIG00000011198	sf3b3	100	97.617	Oreochromis_niloticus
ENSIPUG00000020435	sf3b3	100	93.262	ENSOANG00000001161	-	100	93.262	Ornithorhynchus_anatinus
ENSIPUG00000020435	sf3b3	100	91.126	ENSOCUG00000004139	SF3B3	100	91.126	Oryctolagus_cuniculus
ENSIPUG00000020435	sf3b3	100	96.960	ENSORLG00000013472	sf3b3	100	96.960	Oryzias_latipes
ENSIPUG00000020435	sf3b3	100	96.960	ENSORLG00020017473	sf3b3	100	96.960	Oryzias_latipes_hni
ENSIPUG00000020435	sf3b3	100	96.960	ENSORLG00015007710	sf3b3	100	96.960	Oryzias_latipes_hsok
ENSIPUG00000020435	sf3b3	100	96.631	ENSOMEG00000014483	sf3b3	100	96.631	Oryzias_melastigma
ENSIPUG00000020435	sf3b3	100	92.869	ENSOGAG00000016051	SF3B3	100	92.869	Otolemur_garnettii
ENSIPUG00000020435	sf3b3	100	92.951	ENSOARG00000004816	SF3B3	100	92.951	Ovis_aries
ENSIPUG00000020435	sf3b3	100	93.098	ENSPPAG00000026807	SF3B3	100	93.098	Pan_paniscus
ENSIPUG00000020435	sf3b3	100	93.180	ENSPPRG00000001686	SF3B3	100	93.180	Panthera_pardus
ENSIPUG00000020435	sf3b3	89	90.340	ENSPTIG00000020382	SF3B3	100	90.340	Panthera_tigris_altaica
ENSIPUG00000020435	sf3b3	100	93.098	ENSPTRG00000008308	SF3B3	100	93.098	Pan_troglodytes
ENSIPUG00000020435	sf3b3	100	93.098	ENSPANG00000024075	SF3B3	100	93.098	Papio_anubis
ENSIPUG00000020435	sf3b3	100	97.371	ENSPKIG00000002712	sf3b3	100	97.371	Paramormyrops_kingsleyae
ENSIPUG00000020435	sf3b3	89	93.008	ENSPSIG00000002232	SF3B3	100	93.008	Pelodiscus_sinensis
ENSIPUG00000020435	sf3b3	100	93.016	ENSPEMG00000008603	Sf3b3	100	93.016	Peromyscus_maniculatus_bairdii
ENSIPUG00000020435	sf3b3	100	91.208	ENSPMAG00000001793	sf3b3	100	91.208	Petromyzon_marinus
ENSIPUG00000020435	sf3b3	100	93.262	ENSPCIG00000014927	SF3B3	100	93.262	Phascolarctos_cinereus
ENSIPUG00000020435	sf3b3	100	97.288	ENSPFOG00000015516	sf3b3	100	97.288	Poecilia_formosa
ENSIPUG00000020435	sf3b3	100	97.288	ENSPLAG00000014330	sf3b3	100	97.288	Poecilia_latipinna
ENSIPUG00000020435	sf3b3	100	97.371	ENSPMEG00000019856	sf3b3	100	97.371	Poecilia_mexicana
ENSIPUG00000020435	sf3b3	81	97.256	ENSPREG00000019669	sf3b3	97	97.256	Poecilia_reticulata
ENSIPUG00000020435	sf3b3	95	92.892	ENSPPYG00000007539	SF3B3	100	92.892	Pongo_abelii
ENSIPUG00000020435	sf3b3	100	72.720	ENSPCAG00000002623	SF3B3	100	72.720	Procavia_capensis
ENSIPUG00000020435	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSIPUG00000020435	sf3b3	100	93.098	ENSPVAG00000000684	SF3B3	100	93.098	Pteropus_vampyrus
ENSIPUG00000020435	sf3b3	100	97.453	ENSPNYG00000003528	sf3b3	100	97.453	Pundamilia_nyererei
ENSIPUG00000020435	sf3b3	100	98.603	ENSPNAG00000015419	sf3b3	100	98.603	Pygocentrus_nattereri
ENSIPUG00000020435	sf3b3	100	93.016	ENSRNOG00000017724	Sf3b3	100	93.016	Rattus_norvegicus
ENSIPUG00000020435	sf3b3	100	93.098	ENSRBIG00000021904	SF3B3	100	93.098	Rhinopithecus_bieti
ENSIPUG00000020435	sf3b3	100	93.098	ENSRROG00000045703	SF3B3	100	93.098	Rhinopithecus_roxellana
ENSIPUG00000020435	sf3b3	100	93.098	ENSSBOG00000029156	SF3B3	100	93.098	Saimiri_boliviensis_boliviensis
ENSIPUG00000020435	sf3b3	100	93.262	ENSSHAG00000000372	SF3B3	100	93.262	Sarcophilus_harrisii
ENSIPUG00000020435	sf3b3	100	97.946	ENSSFOG00015012877	sf3b3	100	97.946	Scleropages_formosus
ENSIPUG00000020435	sf3b3	100	97.042	ENSSMAG00000014386	sf3b3	100	97.042	Scophthalmus_maximus
ENSIPUG00000020435	sf3b3	100	97.699	ENSSDUG00000021201	sf3b3	100	97.699	Seriola_dumerili
ENSIPUG00000020435	sf3b3	100	97.617	ENSSLDG00000017532	sf3b3	100	97.617	Seriola_lalandi_dorsalis
ENSIPUG00000020435	sf3b3	93	93.015	ENSSARG00000006917	SF3B3	93	93.015	Sorex_araneus
ENSIPUG00000020435	sf3b3	100	93.016	ENSSPUG00000006253	SF3B3	100	93.016	Sphenodon_punctatus
ENSIPUG00000020435	sf3b3	100	89.400	ENSSPAG00000003125	sf3b3	100	89.400	Stegastes_partitus
ENSIPUG00000020435	sf3b3	100	93.180	ENSSSCG00000025323	SF3B3	100	93.180	Sus_scrofa
ENSIPUG00000020435	sf3b3	100	93.021	ENSTGUG00000006082	SF3B3	100	93.021	Taeniopygia_guttata
ENSIPUG00000020435	sf3b3	89	96.783	ENSTNIG00000004857	sf3b3	100	96.783	Tetraodon_nigroviridis
ENSIPUG00000020435	sf3b3	93	79.049	ENSTBEG00000002946	SF3B3	100	79.049	Tupaia_belangeri
ENSIPUG00000020435	sf3b3	100	92.358	ENSTTRG00000005855	SF3B3	100	92.358	Tursiops_truncatus
ENSIPUG00000020435	sf3b3	100	93.180	ENSUAMG00000006780	SF3B3	100	93.180	Ursus_americanus
ENSIPUG00000020435	sf3b3	100	93.180	ENSUMAG00000017757	SF3B3	100	93.180	Ursus_maritimus
ENSIPUG00000020435	sf3b3	100	78.225	ENSVPAG00000003202	SF3B3	100	78.225	Vicugna_pacos
ENSIPUG00000020435	sf3b3	100	93.262	ENSVVUG00000017922	SF3B3	100	93.262	Vulpes_vulpes
ENSIPUG00000020435	sf3b3	100	93.180	ENSXETG00000032869	SF3B3	100	93.180	Xenopus_tropicalis
ENSIPUG00000020435	sf3b3	77	97.665	ENSXCOG00000013628	sf3b3	97	97.665	Xiphophorus_couchianus
ENSIPUG00000020435	sf3b3	100	97.288	ENSXMAG00000006334	sf3b3	100	97.288	Xiphophorus_maculatus