EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000020564 (Gene tree)
Gene ID: 108270607
Gene Symbol: lars2
Alias: zgc:165522
Full Name: leucyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 55606 bases
Position: chr1:23870125-23925730
Accession: 108270607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030501	tRNA-synt_1g	PF09334.11	2.8e-30	1	2
ENSIPUP00000030501	tRNA-synt_1g	PF09334.11	2.8e-30	2	2
ENSIPUP00000030480	tRNA-synt_1g	PF09334.11	3.3e-30	1	2
ENSIPUP00000030480	tRNA-synt_1g	PF09334.11	3.3e-30	2	2
ENSIPUP00000030531	tRNA-synt_1g	PF09334.11	6e-30	1	2
ENSIPUP00000030531	tRNA-synt_1g	PF09334.11	6e-30	2	2
ENSIPUP00000030531	Anticodon_1	PF08264.13	1.6e-09	1	1
ENSIPUP00000030501	Anticodon_1	PF08264.13	9.1e-09	1	1
ENSIPUP00000030480	Anticodon_1	PF08264.13	9.9e-09	1	1
ENSIPUP00000030480	tRNA-synt_1	PF00133.22	2.2e-51	1	3
ENSIPUP00000030480	tRNA-synt_1	PF00133.22	2.2e-51	2	3
ENSIPUP00000030480	tRNA-synt_1	PF00133.22	2.2e-51	3	3
ENSIPUP00000030501	tRNA-synt_1	PF00133.22	2.1e-50	1	3
ENSIPUP00000030501	tRNA-synt_1	PF00133.22	2.1e-50	2	3
ENSIPUP00000030501	tRNA-synt_1	PF00133.22	2.1e-50	3	3
ENSIPUP00000030531	tRNA-synt_1	PF00133.22	3.1e-49	1	3
ENSIPUP00000030531	tRNA-synt_1	PF00133.22	3.1e-49	2	3
ENSIPUP00000030531	tRNA-synt_1	PF00133.22	3.1e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031730	-	5899	-	ENSIPUP00000030501	870 (aa)	-	-
ENSIPUT00000031758	-	2619	-	ENSIPUP00000030531	872 (aa)	-	-
ENSIPUT00000031708	-	6004	XM_017477438	ENSIPUP00000030480	905 (aa)	XP_017332927	A0A2D0RQZ3

Gene Model

Click here to download ENSIPUG00000020564's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020564	lars2	96	65.899	ENSG00000011376	LARS2	96	65.899	Homo_sapiens
ENSIPUG00000020564	lars2	96	76.267	ENSAPOG00000004760	lars2	96	76.267	Acanthochromis_polyacanthus
ENSIPUG00000020564	lars2	96	65.783	ENSAMEG00000012154	LARS2	96	65.783	Ailuropoda_melanoleuca
ENSIPUG00000020564	lars2	96	74.456	ENSACIG00000010901	lars2	97	74.456	Amphilophus_citrinellus
ENSIPUG00000020564	lars2	96	76.152	ENSAOCG00000018907	lars2	96	76.152	Amphiprion_ocellaris
ENSIPUG00000020564	lars2	96	72.696	ENSAPEG00000019312	lars2	96	72.696	Amphiprion_percula
ENSIPUG00000020564	lars2	96	75.000	ENSATEG00000023835	lars2	96	75.000	Anabas_testudineus
ENSIPUG00000020564	lars2	83	63.709	ENSAPLG00000013338	LARS2	99	63.709	Anas_platyrhynchos
ENSIPUG00000020564	lars2	96	64.557	ENSACAG00000014604	LARS2	96	64.557	Anolis_carolinensis
ENSIPUG00000020564	lars2	96	66.244	ENSANAG00000034662	LARS2	96	66.244	Aotus_nancymaae
ENSIPUG00000020564	lars2	99	74.111	ENSACLG00000013037	lars2	99	74.111	Astatotilapia_calliptera
ENSIPUG00000020564	lars2	100	77.582	ENSAMXG00000010970	lars2	100	77.582	Astyanax_mexicanus
ENSIPUG00000020564	lars2	96	66.590	ENSBTAG00000007315	LARS2	96	66.590	Bos_taurus
ENSIPUG00000020564	lars2	90	34.772	WBGene00003074	lars-2	87	34.772	Caenorhabditis_elegans
ENSIPUG00000020564	lars2	96	66.129	ENSCJAG00000001949	LARS2	96	66.129	Callithrix_jacchus
ENSIPUG00000020564	lars2	96	66.590	ENSCAFG00000014030	LARS2	96	66.590	Canis_familiaris
ENSIPUG00000020564	lars2	96	66.590	ENSCAFG00020013332	LARS2	96	66.590	Canis_lupus_dingo
ENSIPUG00000020564	lars2	96	67.166	ENSCHIG00000003165	LARS2	96	67.166	Capra_hircus
ENSIPUG00000020564	lars2	97	65.267	ENSTSYG00000011445	LARS2	97	65.267	Carlito_syrichta
ENSIPUG00000020564	lars2	96	63.710	ENSCAPG00000015003	LARS2	96	63.710	Cavia_aperea
ENSIPUG00000020564	lars2	96	64.055	ENSCPOG00000008058	LARS2	96	64.055	Cavia_porcellus
ENSIPUG00000020564	lars2	96	66.244	ENSCCAG00000037596	LARS2	96	66.244	Cebus_capucinus
ENSIPUG00000020564	lars2	96	66.094	ENSCATG00000016502	LARS2	96	66.094	Cercocebus_atys
ENSIPUG00000020564	lars2	96	59.332	ENSCLAG00000015249	LARS2	96	59.332	Chinchilla_lanigera
ENSIPUG00000020564	lars2	96	66.129	ENSCSAG00000016339	LARS2	96	66.129	Chlorocebus_sabaeus
ENSIPUG00000020564	lars2	64	71.250	ENSCHOG00000006316	LARS2	70	71.250	Choloepus_hoffmanni
ENSIPUG00000020564	lars2	92	63.814	ENSCPBG00000023173	LARS2	99	64.778	Chrysemys_picta_bellii
ENSIPUG00000020564	lars2	92	45.873	ENSCING00000003591	-	94	45.873	Ciona_intestinalis
ENSIPUG00000020564	lars2	96	65.899	ENSCANG00000038394	LARS2	96	65.899	Colobus_angolensis_palliatus
ENSIPUG00000020564	lars2	99	63.646	ENSCGRG00001013043	Lars2	100	63.646	Cricetulus_griseus_chok1gshd
ENSIPUG00000020564	lars2	99	63.646	ENSCGRG00000000249	Lars2	100	63.646	Cricetulus_griseus_crigri
ENSIPUG00000020564	lars2	96	74.885	ENSCSEG00000005202	lars2	96	74.885	Cynoglossus_semilaevis
ENSIPUG00000020564	lars2	96	75.719	ENSCVAG00000019899	lars2	96	75.719	Cyprinodon_variegatus
ENSIPUG00000020564	lars2	91	77.737	ENSDARG00000075337	lars2	98	77.737	Danio_rerio
ENSIPUG00000020564	lars2	81	63.438	ENSDNOG00000005830	LARS2	99	63.438	Dasypus_novemcinctus
ENSIPUG00000020564	lars2	96	59.655	ENSDORG00000015812	Lars2	96	59.885	Dipodomys_ordii
ENSIPUG00000020564	lars2	89	45.288	FBgn0027085	LeuRS-m	88	45.288	Drosophila_melanogaster
ENSIPUG00000020564	lars2	76	63.704	ENSETEG00000019395	LARS2	76	63.704	Echinops_telfairi
ENSIPUG00000020564	lars2	91	53.856	ENSEBUG00000005332	lars2	99	53.856	Eptatretus_burgeri
ENSIPUG00000020564	lars2	96	66.590	ENSEASG00005008052	LARS2	96	66.590	Equus_asinus_asinus
ENSIPUG00000020564	lars2	96	66.935	ENSECAG00000024346	LARS2	96	66.935	Equus_caballus
ENSIPUG00000020564	lars2	84	52.818	ENSEEUG00000009260	LARS2	99	52.818	Erinaceus_europaeus
ENSIPUG00000020564	lars2	97	76.598	ENSELUG00000024462	lars2	96	76.598	Esox_lucius
ENSIPUG00000020564	lars2	96	65.438	ENSFCAG00000009610	LARS2	96	65.438	Felis_catus
ENSIPUG00000020564	lars2	96	64.490	ENSFALG00000002618	LARS2	96	64.490	Ficedula_albicollis
ENSIPUG00000020564	lars2	97	59.158	ENSFDAG00000020916	LARS2	98	59.158	Fukomys_damarensis
ENSIPUG00000020564	lars2	96	74.568	ENSFHEG00000001812	lars2	96	74.568	Fundulus_heteroclitus
ENSIPUG00000020564	lars2	95	64.583	ENSGMOG00000000795	lars2	100	64.583	Gadus_morhua
ENSIPUG00000020564	lars2	96	65.017	ENSGALG00000036309	LARS2	95	65.017	Gallus_gallus
ENSIPUG00000020564	lars2	96	74.108	ENSGAFG00000002235	lars2	96	74.108	Gambusia_affinis
ENSIPUG00000020564	lars2	99	71.397	ENSGACG00000007099	lars2	98	71.397	Gasterosteus_aculeatus
ENSIPUG00000020564	lars2	99	64.405	ENSGAGG00000010435	LARS2	99	64.405	Gopherus_agassizii
ENSIPUG00000020564	lars2	96	65.668	ENSGGOG00000015767	LARS2	96	65.668	Gorilla_gorilla
ENSIPUG00000020564	lars2	99	73.778	ENSHBUG00000014070	lars2	99	73.778	Haplochromis_burtoni
ENSIPUG00000020564	lars2	96	63.813	ENSHGLG00000016811	LARS2	97	63.813	Heterocephalus_glaber_female
ENSIPUG00000020564	lars2	96	63.813	ENSHGLG00100012898	LARS2	97	63.813	Heterocephalus_glaber_male
ENSIPUG00000020564	lars2	96	70.273	ENSHCOG00000011897	lars2	96	70.514	Hippocampus_comes
ENSIPUG00000020564	lars2	96	66.820	ENSSTOG00000012878	LARS2	96	66.820	Ictidomys_tridecemlineatus
ENSIPUG00000020564	lars2	96	67.125	ENSJJAG00000009780	Lars2	96	67.125	Jaculus_jaculus
ENSIPUG00000020564	lars2	96	74.483	ENSKMAG00000020875	lars2	96	74.483	Kryptolebias_marmoratus
ENSIPUG00000020564	lars2	96	75.489	ENSLBEG00000006552	lars2	97	75.489	Labrus_bergylta
ENSIPUG00000020564	lars2	96	70.824	ENSLACG00000005448	LARS2	96	70.824	Latimeria_chalumnae
ENSIPUG00000020564	lars2	100	71.885	ENSLOCG00000002048	lars2	100	71.885	Lepisosteus_oculatus
ENSIPUG00000020564	lars2	96	65.323	ENSLAFG00000002474	LARS2	98	65.323	Loxodonta_africana
ENSIPUG00000020564	lars2	96	66.475	ENSMFAG00000003225	LARS2	96	66.475	Macaca_fascicularis
ENSIPUG00000020564	lars2	96	66.359	ENSMMUG00000018020	LARS2	96	66.359	Macaca_mulatta
ENSIPUG00000020564	lars2	96	66.359	ENSMNEG00000031043	LARS2	96	66.359	Macaca_nemestrina
ENSIPUG00000020564	lars2	96	66.359	ENSMLEG00000033552	LARS2	96	66.359	Mandrillus_leucophaeus
ENSIPUG00000020564	lars2	96	74.539	ENSMAMG00000023987	lars2	96	74.877	Mastacembelus_armatus
ENSIPUG00000020564	lars2	99	73.778	ENSMZEG00005013585	lars2	99	73.778	Maylandia_zebra
ENSIPUG00000020564	lars2	93	62.191	ENSMGAG00000011621	LARS2	100	62.191	Meleagris_gallopavo
ENSIPUG00000020564	lars2	99	61.852	ENSMAUG00000014868	Lars2	100	61.852	Mesocricetus_auratus
ENSIPUG00000020564	lars2	96	67.009	ENSMICG00000049159	LARS2	97	67.009	Microcebus_murinus
ENSIPUG00000020564	lars2	99	63.858	ENSMOCG00000018666	Lars2	99	63.858	Microtus_ochrogaster
ENSIPUG00000020564	lars2	96	69.009	ENSMMOG00000008951	lars2	96	69.009	Mola_mola
ENSIPUG00000020564	lars2	99	65.078	ENSMODG00000011311	LARS2	99	65.078	Monodelphis_domestica
ENSIPUG00000020564	lars2	99	72.383	ENSMALG00000007892	lars2	99	72.383	Monopterus_albus
ENSIPUG00000020564	lars2	99	63.827	MGP_CAROLIEiJ_G0032858	Lars2	100	63.827	Mus_caroli
ENSIPUG00000020564	lars2	99	64.159	ENSMUSG00000035202	Lars2	100	64.159	Mus_musculus
ENSIPUG00000020564	lars2	99	63.385	MGP_PahariEiJ_G0015724	Lars2	100	63.385	Mus_pahari
ENSIPUG00000020564	lars2	99	64.049	MGP_SPRETEiJ_G0034006	Lars2	100	64.049	Mus_spretus
ENSIPUG00000020564	lars2	96	61.863	ENSMPUG00000015327	LARS2	97	61.863	Mustela_putorius_furo
ENSIPUG00000020564	lars2	97	63.905	ENSMLUG00000010333	LARS2	97	63.905	Myotis_lucifugus
ENSIPUG00000020564	lars2	96	65.668	ENSNGAG00000011444	Lars2	96	65.668	Nannospalax_galili
ENSIPUG00000020564	lars2	99	70.333	ENSNBRG00000022165	lars2	99	70.333	Neolamprologus_brichardi
ENSIPUG00000020564	lars2	96	63.479	ENSNLEG00000006048	LARS2	96	63.479	Nomascus_leucogenys
ENSIPUG00000020564	lars2	91	55.218	ENSMEUG00000000032	LARS2	99	55.218	Notamacropus_eugenii
ENSIPUG00000020564	lars2	96	62.327	ENSOPRG00000000468	LARS2	96	62.327	Ochotona_princeps
ENSIPUG00000020564	lars2	96	64.862	ENSODEG00000009801	LARS2	96	64.862	Octodon_degus
ENSIPUG00000020564	lars2	99	74.222	ENSONIG00000006802	lars2	99	74.222	Oreochromis_niloticus
ENSIPUG00000020564	lars2	96	66.398	ENSOANG00000006800	LARS2	96	66.398	Ornithorhynchus_anatinus
ENSIPUG00000020564	lars2	96	65.899	ENSOCUG00000001964	LARS2	96	65.899	Oryctolagus_cuniculus
ENSIPUG00000020564	lars2	96	74.654	ENSORLG00000004574	lars2	92	74.654	Oryzias_latipes
ENSIPUG00000020564	lars2	96	74.885	ENSORLG00020022619	lars2	92	74.885	Oryzias_latipes_hni
ENSIPUG00000020564	lars2	96	74.654	ENSORLG00015008257	lars2	93	74.654	Oryzias_latipes_hsok
ENSIPUG00000020564	lars2	97	74.516	ENSOMEG00000011491	lars2	97	74.516	Oryzias_melastigma
ENSIPUG00000020564	lars2	82	66.307	ENSOGAG00000004381	LARS2	91	66.307	Otolemur_garnettii
ENSIPUG00000020564	lars2	96	67.352	ENSOARG00000010595	LARS2	97	67.352	Ovis_aries
ENSIPUG00000020564	lars2	96	65.899	ENSPPAG00000037972	LARS2	96	65.899	Pan_paniscus
ENSIPUG00000020564	lars2	96	65.323	ENSPPRG00000005866	LARS2	96	65.323	Panthera_pardus
ENSIPUG00000020564	lars2	96	65.323	ENSPTIG00000014039	LARS2	96	65.323	Panthera_tigris_altaica
ENSIPUG00000020564	lars2	96	65.783	ENSPTRG00000014833	LARS2	96	65.783	Pan_troglodytes
ENSIPUG00000020564	lars2	96	66.359	ENSPANG00000015569	LARS2	96	66.359	Papio_anubis
ENSIPUG00000020564	lars2	96	74.799	ENSPKIG00000023485	lars2	96	74.799	Paramormyrops_kingsleyae
ENSIPUG00000020564	lars2	77	64.765	ENSPSIG00000016777	LARS2	100	64.765	Pelodiscus_sinensis
ENSIPUG00000020564	lars2	96	71.544	ENSPMGG00000022738	lars2	98	71.544	Periophthalmus_magnuspinnatus
ENSIPUG00000020564	lars2	99	60.957	ENSPEMG00000021995	Lars2	99	60.957	Peromyscus_maniculatus_bairdii
ENSIPUG00000020564	lars2	99	63.901	ENSPCIG00000025139	LARS2	99	63.901	Phascolarctos_cinereus
ENSIPUG00000020564	lars2	96	73.448	ENSPFOG00000011593	lars2	100	71.623	Poecilia_formosa
ENSIPUG00000020564	lars2	96	73.418	ENSPLAG00000021668	lars2	96	73.418	Poecilia_latipinna
ENSIPUG00000020564	lars2	96	73.533	ENSPMEG00000023896	lars2	96	73.533	Poecilia_mexicana
ENSIPUG00000020564	lars2	96	72.267	ENSPREG00000009319	lars2	96	72.267	Poecilia_reticulata
ENSIPUG00000020564	lars2	96	66.014	ENSPPYG00000013946	LARS2	96	66.014	Pongo_abelii
ENSIPUG00000020564	lars2	96	62.327	ENSPCAG00000003818	LARS2	96	62.327	Procavia_capensis
ENSIPUG00000020564	lars2	96	63.479	ENSPCOG00000027876	LARS2	96	63.479	Propithecus_coquereli
ENSIPUG00000020564	lars2	97	63.043	ENSPVAG00000017735	LARS2	97	63.043	Pteropus_vampyrus
ENSIPUG00000020564	lars2	99	74.111	ENSPNYG00000004846	lars2	99	74.111	Pundamilia_nyererei
ENSIPUG00000020564	lars2	100	85.083	ENSPNAG00000021872	lars2	100	85.083	Pygocentrus_nattereri
ENSIPUG00000020564	lars2	96	65.323	ENSRNOG00000004760	Lars2	100	61.497	Rattus_norvegicus
ENSIPUG00000020564	lars2	96	66.129	ENSRBIG00000038739	LARS2	96	66.129	Rhinopithecus_bieti
ENSIPUG00000020564	lars2	96	66.014	ENSRROG00000043579	LARS2	96	66.014	Rhinopithecus_roxellana
ENSIPUG00000020564	lars2	90	38.524	YLR382C	NAM2	91	49.242	Saccharomyces_cerevisiae
ENSIPUG00000020564	lars2	99	63.938	ENSSBOG00000022764	LARS2	100	63.938	Saimiri_boliviensis_boliviensis
ENSIPUG00000020564	lars2	99	64.302	ENSSHAG00000000831	LARS2	99	64.302	Sarcophilus_harrisii
ENSIPUG00000020564	lars2	97	69.714	ENSSFOG00015022336	lars2	97	69.714	Scleropages_formosus
ENSIPUG00000020564	lars2	97	66.819	ENSSFOG00015022305	lars2	97	66.819	Scleropages_formosus
ENSIPUG00000020564	lars2	99	74.082	ENSSMAG00000002353	lars2	99	74.082	Scophthalmus_maximus
ENSIPUG00000020564	lars2	99	73.385	ENSSDUG00000016697	lars2	99	73.385	Seriola_dumerili
ENSIPUG00000020564	lars2	96	75.691	ENSSLDG00000016976	lars2	96	75.691	Seriola_lalandi_dorsalis
ENSIPUG00000020564	lars2	64	68.447	ENSSARG00000004139	-	67	68.447	Sorex_araneus
ENSIPUG00000020564	lars2	96	65.247	ENSSPUG00000002926	LARS2	96	65.247	Sphenodon_punctatus
ENSIPUG00000020564	lars2	86	72.596	ENSSPAG00000022504	LARS2	98	68.408	Stegastes_partitus
ENSIPUG00000020564	lars2	52	74.735	ENSSPAG00000013283	-	89	75.385	Stegastes_partitus
ENSIPUG00000020564	lars2	96	67.227	ENSSSCG00000011312	LARS2	96	67.227	Sus_scrofa
ENSIPUG00000020564	lars2	96	64.800	ENSTGUG00000005000	-	97	64.800	Taeniopygia_guttata
ENSIPUG00000020564	lars2	96	74.108	ENSTRUG00000012513	lars2	96	74.108	Takifugu_rubripes
ENSIPUG00000020564	lars2	91	74.636	ENSTNIG00000009647	lars2	100	74.636	Tetraodon_nigroviridis
ENSIPUG00000020564	lars2	79	64.270	ENSTBEG00000010757	LARS2	87	64.270	Tupaia_belangeri
ENSIPUG00000020564	lars2	83	69.477	ENSTTRG00000006813	LARS2	85	67.374	Tursiops_truncatus
ENSIPUG00000020564	lars2	96	65.323	ENSUAMG00000002133	LARS2	98	65.323	Ursus_americanus
ENSIPUG00000020564	lars2	96	65.323	ENSUMAG00000005688	LARS2	96	65.323	Ursus_maritimus
ENSIPUG00000020564	lars2	90	60.148	ENSVPAG00000009088	LARS2	96	60.148	Vicugna_pacos
ENSIPUG00000020564	lars2	99	64.420	ENSVVUG00000006969	LARS2	100	64.420	Vulpes_vulpes
ENSIPUG00000020564	lars2	96	63.982	ENSXETG00000014411	lars2	96	63.982	Xenopus_tropicalis
ENSIPUG00000020564	lars2	84	80.631	ENSXCOG00000016138	lars2	95	80.995	Xiphophorus_couchianus
ENSIPUG00000020564	lars2	96	73.878	ENSXMAG00000010803	lars2	96	73.878	Xiphophorus_maculatus