EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000020583 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5689 bases
Position: chr3:13886634-13892322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030470	RVT_1	PF00078.27	1e-08	1	1
ENSIPUP00000030470	zf-CCHC	PF00098.23	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031697	-	1995	-	ENSIPUP00000030470	664 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000020583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000020583	-	94	86.888	ENSIPUG00000023478	-	97	87.801
ENSIPUG00000020583	-	91	86.743	ENSIPUG00000009957	-	97	86.268
ENSIPUG00000020583	-	94	82.428	ENSIPUG00000000467	-	87	84.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020583	-	52	34.204	ENSAPOG00000012172	-	68	34.204	Acanthochromis_polyacanthus
ENSIPUG00000020583	-	85	33.227	ENSACAG00000029367	-	67	42.900	Anolis_carolinensis
ENSIPUG00000020583	-	93	44.428	ENSAMXG00000033831	-	85	45.263	Astyanax_mexicanus
ENSIPUG00000020583	-	90	46.845	ENSAMXG00000043875	-	92	46.361	Astyanax_mexicanus
ENSIPUG00000020583	-	81	47.569	ENSAMXG00000030934	-	87	47.569	Astyanax_mexicanus
ENSIPUG00000020583	-	91	44.193	ENSAMXG00000036897	-	90	44.193	Astyanax_mexicanus
ENSIPUG00000020583	-	79	47.359	ENSAMXG00000038544	-	84	47.359	Astyanax_mexicanus
ENSIPUG00000020583	-	82	48.342	ENSAMXG00000029689	-	77	47.993	Astyanax_mexicanus
ENSIPUG00000020583	-	87	39.060	ENSKMAG00000021728	-	93	39.060	Kryptolebias_marmoratus
ENSIPUG00000020583	-	86	37.398	ENSORLG00000025074	-	89	37.138	Oryzias_latipes
ENSIPUG00000020583	-	67	32.988	ENSORLG00000004601	-	60	33.196	Oryzias_latipes
ENSIPUG00000020583	-	89	39.478	ENSORLG00000027546	-	81	40.140	Oryzias_latipes
ENSIPUG00000020583	-	89	37.816	ENSORLG00020019360	-	90	37.816	Oryzias_latipes_hni
ENSIPUG00000020583	-	94	36.976	ENSORLG00020008270	-	89	37.520	Oryzias_latipes_hni
ENSIPUG00000020583	-	85	38.087	ENSORLG00020018037	-	86	38.071	Oryzias_latipes_hni
ENSIPUG00000020583	-	84	41.667	ENSPKIG00000021000	-	99	41.447	Paramormyrops_kingsleyae
ENSIPUG00000020583	-	86	41.431	ENSPKIG00000000452	-	92	41.431	Paramormyrops_kingsleyae
ENSIPUG00000020583	-	87	46.477	ENSPNAG00000014076	-	92	46.477	Pygocentrus_nattereri
ENSIPUG00000020583	-	86	47.395	ENSPNAG00000003267	-	99	44.030	Pygocentrus_nattereri