EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000020587 (Gene tree)
Gene ID: 108268616
Gene Symbol: snx25
Alias: -
Full Name: sorting nexin 25
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 48602 bases
Position: chr8:8985537-9034138
Accession: 108268616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030520	Isy1	PF06246.12	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031774	-	2508	-	ENSIPUP00000030545	835 (aa)	-	-
ENSIPUT00000031748	-	2748	-	ENSIPUP00000030520	915 (aa)	-	-
ENSIPUT00000031733	-	2880	XM_017473670	ENSIPUP00000030505	959 (aa)	XP_017329159	A0A2D0RF44

Gene Model

Click here to download ENSIPUG00000020587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020587	snx25	85	70.788	ENSACIG00000022335	snx25	98	69.916	Amphilophus_citrinellus
ENSIPUG00000020587	snx25	86	70.659	ENSACLG00000020812	snx25	97	71.257	Astatotilapia_calliptera
ENSIPUG00000020587	snx25	87	71.259	ENSCVAG00000020558	snx25	99	71.259	Cyprinodon_variegatus
ENSIPUG00000020587	snx25	75	65.765	ENSGAFG00000015334	snx25	97	65.765	Gambusia_affinis
ENSIPUG00000020587	snx25	86	70.588	ENSHBUG00000020302	snx25	97	70.238	Haplochromis_burtoni
ENSIPUG00000020587	snx25	86	71.394	ENSLBEG00000014990	snx25	99	71.394	Labrus_bergylta
ENSIPUG00000020587	snx25	86	70.419	ENSMZEG00005005079	snx25	97	70.238	Maylandia_zebra
ENSIPUG00000020587	snx25	87	70.167	ENSMALG00000013142	snx25	100	70.167	Monopterus_albus
ENSIPUG00000020587	snx25	99	69.864	ENSPMEG00000007381	snx25	98	69.751	Poecilia_mexicana
ENSIPUG00000020587	snx25	86	70.659	ENSPNYG00000000032	snx25	97	71.257	Pundamilia_nyererei
ENSIPUG00000020587	snx25	95	67.795	ENSSFOG00015020775	SNX25	99	66.283	Scleropages_formosus
ENSIPUG00000020587	snx25	87	70.883	ENSSMAG00000014099	snx25	100	70.883	Scophthalmus_maximus
ENSIPUG00000020587	snx25	85	72.405	ENSSDUG00000014434	snx25	100	72.405	Seriola_dumerili
ENSIPUG00000020587	snx25	87	71.752	ENSXMAG00000003919	snx25	99	71.752	Xiphophorus_maculatus