EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000020686 (Gene tree)
Gene ID: 108260133
Gene Symbol: MATR3
Alias: si:ch211-271b14.1|zgc:152816
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 9004 bases
Position: chr28:17499348-17508351
Accession: 108260133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000030623	RRM_5	PF13893.6	1.2e-06	1	1
ENSIPUP00000030639	RRM_5	PF13893.6	1.2e-06	1	1
ENSIPUP00000030659	RRM_5	PF13893.6	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000031869	-	2859	-	ENSIPUP00000030639	935 (aa)	-	-
ENSIPUT00000031889	-	2922	-	ENSIPUP00000030659	956 (aa)	-	-
ENSIPUT00000031853	-	2844	XM_017460166	ENSIPUP00000030623	930 (aa)	XP_017315655	W5UCT4

Gene Model

Click here to download ENSIPUG00000020686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020686	MATR3	88	54.286	ENSG00000015479	MATR3	97	33.898	Homo_sapiens
ENSIPUG00000020686	MATR3	88	63.636	ENSAPLG00000008118	-	60	63.636	Anas_platyrhynchos
ENSIPUG00000020686	MATR3	88	54.167	ENSAMXG00000010685	matr3l1.1	70	55.769	Astyanax_mexicanus
ENSIPUG00000020686	MATR3	61	55.714	ENSCATG00000041304	-	51	54.930	Cercocebus_atys
ENSIPUG00000020686	MATR3	82	63.636	ENSCPBG00000006303	-	60	63.636	Chrysemys_picta_bellii
ENSIPUG00000020686	MATR3	95	35.644	ENSCVAG00000005337	matr3l1.1	68	38.119	Cyprinodon_variegatus
ENSIPUG00000020686	MATR3	97	54.435	ENSELUG00000021651	si:ch211-271b14.1	76	54.435	Esox_lucius
ENSIPUG00000020686	MATR3	79	41.525	ENSFALG00000003071	-	59	63.636	Ficedula_albicollis
ENSIPUG00000020686	MATR3	74	63.636	ENSGALG00000002478	MATR3	61	63.636	Gallus_gallus
ENSIPUG00000020686	MATR3	82	63.636	ENSGAGG00000011386	-	60	63.636	Gopherus_agassizii
ENSIPUG00000020686	MATR3	87	54.054	ENSLACG00000006743	-	71	62.500	Latimeria_chalumnae
ENSIPUG00000020686	MATR3	88	55.714	ENSMLEG00000041178	-	53	54.930	Mandrillus_leucophaeus
ENSIPUG00000020686	MATR3	75	51.282	ENSMGAG00000001331	-	61	63.636	Meleagris_gallopavo
ENSIPUG00000020686	MATR3	86	55.714	MGP_CAROLIEiJ_G0022108	Matr3	50	54.930	Mus_caroli
ENSIPUG00000020686	MATR3	81	63.636	ENSPSIG00000014598	-	60	63.636	Pelodiscus_sinensis
ENSIPUG00000020686	MATR3	58	36.242	ENSPNYG00000015855	-	64	36.242	Pundamilia_nyererei
ENSIPUG00000020686	MATR3	89	55.714	ENSRROG00000039415	-	50	54.930	Rhinopithecus_roxellana
ENSIPUG00000020686	MATR3	76	56.164	ENSTGUG00000014568	MATR3	59	63.636	Taeniopygia_guttata
ENSIPUG00000020686	MATR3	89	34.356	ENSTNIG00000003166	matr3l1.1	62	45.283	Tetraodon_nigroviridis
ENSIPUG00000020686	MATR3	93	66.071	ENSXETG00000003838	matr3	63	66.667	Xenopus_tropicalis
ENSIPUG00000020686	MATR3	77	36.364	ENSXMAG00000014107	-	69	36.364	Xiphophorus_maculatus