EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000020692 (Gene tree)
Gene ID
108273926
Gene Symbol
patl2
Alias
si:ch211-103b1.2
Full Name
PAT1 homolog 2
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
8590 bases
Position
chr13:26078038-26086627
Accession
108273926
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000030633PAT1PF09770.91.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000031863-2436XM_017483624ENSIPUP00000030633677 (aa)XP_017339113A0A2D0S8P5
Gene Model
Click here to download ENSIPUG00000020692's gene model file
Pathways
Pathway IDPathway NameSource
ipu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020692's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000020692patl25635.971ENSG00000166889PATL16734.151Homo_sapiens
ENSIPUG00000020692patl26344.244ENSG00000229474PATL210045.833Homo_sapiens
ENSIPUG00000020692patl29554.519ENSAPOG00000022988patl29955.096Acanthochromis_polyacanthus
ENSIPUG00000020692patl25637.000ENSAPOG00000021290patl15437.562Acanthochromis_polyacanthus
ENSIPUG00000020692patl26034.763ENSAMEG00000014215PATL15734.989Ailuropoda_melanoleuca
ENSIPUG00000020692patl26345.067ENSAMEG00000014997PATL28445.067Ailuropoda_melanoleuca
ENSIPUG00000020692patl25638.404ENSACIG00000005182patl15338.653Amphilophus_citrinellus
ENSIPUG00000020692patl25637.280ENSAOCG00000021993patl15138.095Amphiprion_ocellaris
ENSIPUG00000020692patl210053.931ENSAOCG00000023738patl29654.483Amphiprion_ocellaris
ENSIPUG00000020692patl27459.566ENSAPEG00000011299patl29952.024Amphiprion_percula
ENSIPUG00000020692patl25637.500ENSATEG00000002230patl15136.866Anabas_testudineus
ENSIPUG00000020692patl29552.932ENSATEG00000019567patl29953.353Anabas_testudineus
ENSIPUG00000020692patl28144.891ENSAPLG00000003980PATL29846.000Anas_platyrhynchos
ENSIPUG00000020692patl26037.444ENSACAG00000006607PATL15737.444Anolis_carolinensis
ENSIPUG00000020692patl26344.570ENSANAG00000022701PATL28044.796Aotus_nancymaae
ENSIPUG00000020692patl25636.516ENSANAG00000023078PATL16733.774Aotus_nancymaae
ENSIPUG00000020692patl210054.834ENSACLG00000010326patl210054.733Astatotilapia_calliptera
ENSIPUG00000020692patl210074.207ENSAMXG00000020293patl210074.207Astyanax_mexicanus
ENSIPUG00000020692patl25636.341ENSAMXG00000010731patl15836.261Astyanax_mexicanus
ENSIPUG00000020692patl25635.731ENSBTAG00000005913PATL16733.774Bos_taurus
ENSIPUG00000020692patl25246.369ENSBTAG00000001558PATL29946.369Bos_taurus
ENSIPUG00000020692patl25635.971ENSCJAG00000016192PATL16733.774Callithrix_jacchus
ENSIPUG00000020692patl26344.196ENSCJAG00000002379PATL28044.196Callithrix_jacchus
ENSIPUG00000020692patl26034.763ENSCAFG00000007581PATL15734.989Canis_familiaris
ENSIPUG00000020692patl26445.657ENSCAFG00000013629PATL28245.657Canis_familiaris
ENSIPUG00000020692patl26034.852ENSCAFG00020001648PATL16533.333Canis_lupus_dingo
ENSIPUG00000020692patl26445.657ENSCAFG00020022169PATL28145.657Canis_lupus_dingo
ENSIPUG00000020692patl26145.433ENSCHIG00000026665PATL27945.199Capra_hircus
ENSIPUG00000020692patl25636.077ENSTSYG00000012748PATL19330.027Carlito_syrichta
ENSIPUG00000020692patl26444.843ENSTSYG00000032456PATL28045.270Carlito_syrichta
ENSIPUG00000020692patl25735.545ENSCAPG00000013668PATL16733.396Cavia_aperea
ENSIPUG00000020692patl25935.714ENSCPOG00000006827PATL15535.714Cavia_porcellus
ENSIPUG00000020692patl25942.588ENSCPOG00000002922PATL28042.824Cavia_porcellus
ENSIPUG00000020692patl25636.211ENSCCAG00000023759PATL16734.151Cebus_capucinus
ENSIPUG00000020692patl26344.318ENSCCAG00000025261PATL28143.864Cebus_capucinus
ENSIPUG00000020692patl26444.866ENSCATG00000034794PATL210045.833Cercocebus_atys
ENSIPUG00000020692patl25736.019ENSCLAG00000003427PATL16833.898Chinchilla_lanigera
ENSIPUG00000020692patl25744.691ENSCLAG00000014407PATL28044.691Chinchilla_lanigera
ENSIPUG00000020692patl26444.944ENSCSAG00000009601PATL28144.494Chlorocebus_sabaeus
ENSIPUG00000020692patl25635.731ENSCSAG00000006095PATL17533.774Chlorocebus_sabaeus
ENSIPUG00000020692patl25736.124ENSCHOG00000001611PATL16635.885Choloepus_hoffmanni
ENSIPUG00000020692patl27347.689ENSCPBG00000006150PATL28147.689Chrysemys_picta_bellii
ENSIPUG00000020692patl25635.971ENSCANG00000039197PATL16733.962Colobus_angolensis_palliatus
ENSIPUG00000020692patl26444.619ENSCANG00000013856PATL28144.695Colobus_angolensis_palliatus
ENSIPUG00000020692patl25835.129ENSCGRG00001024927Patl16732.895Cricetulus_griseus_chok1gshd
ENSIPUG00000020692patl26043.357ENSCGRG00001010801Patl28244.340Cricetulus_griseus_chok1gshd
ENSIPUG00000020692patl26043.357ENSCGRG00000013007Patl28244.340Cricetulus_griseus_crigri
ENSIPUG00000020692patl25835.129ENSCGRG00000000461Patl16832.895Cricetulus_griseus_crigri
ENSIPUG00000020692patl25636.869ENSCSEG00000008261patl15537.688Cynoglossus_semilaevis
ENSIPUG00000020692patl28755.628ENSCSEG00000009438patl28956.158Cynoglossus_semilaevis
ENSIPUG00000020692patl25637.310ENSCVAG00000006664patl15337.310Cyprinodon_variegatus
ENSIPUG00000020692patl29646.707ENSCVAG00000016203patl29647.879Cyprinodon_variegatus
ENSIPUG00000020692patl26037.028ENSDARG00000017423patl15437.028Danio_rerio
ENSIPUG00000020692patl210060.198ENSDARG00000089567patl210061.396Danio_rerio
ENSIPUG00000020692patl26842.798ENSDNOG00000036837PATL28143.004Dasypus_novemcinctus
ENSIPUG00000020692patl26035.227ENSDNOG00000038865PATL19433.396Dasypus_novemcinctus
ENSIPUG00000020692patl26743.897ENSDORG00000026649Patl28245.843Dipodomys_ordii
ENSIPUG00000020692patl25246.499ENSETEG00000005068PATL29946.779Echinops_telfairi
ENSIPUG00000020692patl25635.492ENSEASG00005007963PATL19830.582Equus_asinus_asinus
ENSIPUG00000020692patl26443.018ENSEASG00005017984PATL28042.793Equus_asinus_asinus
ENSIPUG00000020692patl25635.922ENSECAG00000011411PATL15635.374Equus_caballus
ENSIPUG00000020692patl26444.595ENSECAG00000013462PATL28144.595Equus_caballus
ENSIPUG00000020692patl29956.982ENSELUG00000023244patl29957.687Esox_lucius
ENSIPUG00000020692patl25636.683ENSELUG00000024249patl15436.111Esox_lucius
ENSIPUG00000020692patl26445.111ENSFCAG00000027170PATL28245.111Felis_catus
ENSIPUG00000020692patl28044.205ENSFALG00000009768PATL29841.949Ficedula_albicollis
ENSIPUG00000020692patl29436.977ENSFALG00000012150PATL15736.795Ficedula_albicollis
ENSIPUG00000020692patl25943.029ENSFDAG00000012242PATL28143.029Fukomys_damarensis
ENSIPUG00000020692patl25736.019ENSFDAG00000016128PATL16833.905Fukomys_damarensis
ENSIPUG00000020692patl25637.783ENSFHEG00000017790patl16633.333Fundulus_heteroclitus
ENSIPUG00000020692patl26964.780ENSFHEG00000009727patl29164.103Fundulus_heteroclitus
ENSIPUG00000020692patl26159.620ENSGMOG00000005666patl29961.307Gadus_morhua
ENSIPUG00000020692patl25735.613ENSGALG00000042641PATL15835.973Gallus_gallus
ENSIPUG00000020692patl29250.554ENSGALG00000002167PATL29150.208Gallus_gallus
ENSIPUG00000020692patl210053.771ENSGAFG00000019344patl210053.444Gambusia_affinis
ENSIPUG00000020692patl25638.155ENSGAFG00000006508patl15834.843Gambusia_affinis
ENSIPUG00000020692patl25737.313ENSGACG00000016448patl15338.119Gasterosteus_aculeatus
ENSIPUG00000020692patl25835.648ENSGAGG00000004461PATL19830.133Gopherus_agassizii
ENSIPUG00000020692patl25636.320ENSGGOG00000004335PATL19830.251Gorilla_gorilla
ENSIPUG00000020692patl26344.244ENSGGOG00000025923PATL28044.545Gorilla_gorilla
ENSIPUG00000020692patl29754.873ENSHBUG00000005929patl29854.573Haplochromis_burtoni
ENSIPUG00000020692patl25942.723ENSHGLG00000017415-8142.991Heterocephalus_glaber_female
ENSIPUG00000020692patl25943.155ENSHGLG00100008419-8143.155Heterocephalus_glaber_male
ENSIPUG00000020692patl29753.256ENSHCOG00000016754patl29751.404Hippocampus_comes
ENSIPUG00000020692patl26145.775ENSSTOG00000033848PATL28045.045Ictidomys_tridecemlineatus
ENSIPUG00000020692patl25635.971ENSSTOG00000013764PATL16833.710Ictidomys_tridecemlineatus
ENSIPUG00000020692patl27032.514ENSJJAG00000010135Patl16732.638Jaculus_jaculus
ENSIPUG00000020692patl25638.000ENSKMAG00000020848patl15634.714Kryptolebias_marmoratus
ENSIPUG00000020692patl210054.069ENSKMAG00000021275patl210054.621Kryptolebias_marmoratus
ENSIPUG00000020692patl28257.751ENSLBEG00000022344patl210053.699Labrus_bergylta
ENSIPUG00000020692patl25638.060ENSLBEG00000023617patl15137.443Labrus_bergylta
ENSIPUG00000020692patl29440.515ENSLACG00000005291-9741.520Latimeria_chalumnae
ENSIPUG00000020692patl25832.151ENSLACG00000004640PATL16132.071Latimeria_chalumnae
ENSIPUG00000020692patl25634.815ENSLOCG00000000717patl15534.884Lepisosteus_oculatus
ENSIPUG00000020692patl25335.925ENSLAFG00000015161PATL15635.227Loxodonta_africana
ENSIPUG00000020692patl26242.404ENSLAFG00000031124PATL27842.404Loxodonta_africana
ENSIPUG00000020692patl26444.766ENSMFAG00000003565PATL28245.067Macaca_fascicularis
ENSIPUG00000020692patl25245.556ENSMMUG00000014294PATL210045.556Macaca_mulatta
ENSIPUG00000020692patl26444.866ENSMNEG00000034510PATL28144.719Macaca_nemestrina
ENSIPUG00000020692patl26444.643ENSMLEG00000042248PATL28144.494Mandrillus_leucophaeus
ENSIPUG00000020692patl28058.212ENSMAMG00000013327patl29954.449Mastacembelus_armatus
ENSIPUG00000020692patl25637.811ENSMAMG00000003950patl15238.346Mastacembelus_armatus
ENSIPUG00000020692patl210054.834ENSMZEG00005014292patl210054.733Maylandia_zebra
ENSIPUG00000020692patl25138.032ENSMGAG00000003406PATL15238.032Meleagris_gallopavo
ENSIPUG00000020692patl28144.260ENSMGAG00000001309PATL29845.545Meleagris_gallopavo
ENSIPUG00000020692patl26343.875ENSMAUG00000001008Patl28444.595Mesocricetus_auratus
ENSIPUG00000020692patl25733.886ENSMICG00000004172PATL16632.336Microcebus_murinus
ENSIPUG00000020692patl25245.730ENSMICG00000005037PATL210045.730Microcebus_murinus
ENSIPUG00000020692patl25945.215ENSMOCG00000015367Patl27845.215Microtus_ochrogaster
ENSIPUG00000020692patl25835.129ENSMOCG00000010087Patl16733.146Microtus_ochrogaster
ENSIPUG00000020692patl210047.813ENSMMOG00000001299patl210048.251Mola_mola
ENSIPUG00000020692patl25935.885ENSMMOG00000013711patl15835.885Mola_mola
ENSIPUG00000020692patl26444.934ENSMODG00000017690PATL28443.478Monodelphis_domestica
ENSIPUG00000020692patl26035.682ENSMODG00000020201PATL15736.219Monodelphis_domestica
ENSIPUG00000020692patl210053.427ENSMALG00000008131patl29553.576Monopterus_albus
ENSIPUG00000020692patl25338.147ENSMALG00000018706patl15338.147Monopterus_albus
ENSIPUG00000020692patl26041.743MGP_CAROLIEiJ_G0024205Patl28042.857Mus_caroli
ENSIPUG00000020692patl25835.597MGP_CAROLIEiJ_G0022739Patl16733.522Mus_caroli
ENSIPUG00000020692patl25835.363ENSMUSG00000046139Patl16733.333Mus_musculus
ENSIPUG00000020692patl25941.981ENSMUSG00000027233Patl27843.128Mus_musculus
ENSIPUG00000020692patl26042.299MGP_PahariEiJ_G0025648Patl28042.299Mus_pahari
ENSIPUG00000020692patl25835.597MGP_SPRETEiJ_G0023652Patl16733.522Mus_spretus
ENSIPUG00000020692patl26041.839MGP_SPRETEiJ_G0025122Patl28042.956Mus_spretus
ENSIPUG00000020692patl26034.989ENSMPUG00000014607PATL15734.989Mustela_putorius_furo
ENSIPUG00000020692patl25939.907ENSNGAG00000020368Patl28239.858Nannospalax_galili
ENSIPUG00000020692patl29955.459ENSNBRG00000011745patl29955.022Neolamprologus_brichardi
ENSIPUG00000020692patl26444.494ENSNLEG00000005673PATL28244.494Nomascus_leucogenys
ENSIPUG00000020692patl25635.835ENSNLEG00000013081PATL19830.119Nomascus_leucogenys
ENSIPUG00000020692patl25635.411ENSOPRG00000007963PATL16035.088Ochotona_princeps
ENSIPUG00000020692patl210054.058ENSONIG00000011519patl210054.608Oreochromis_niloticus
ENSIPUG00000020692patl25637.750ENSONIG00000004170patl15336.709Oreochromis_niloticus
ENSIPUG00000020692patl26243.722ENSOANG00000001538-9743.722Ornithorhynchus_anatinus
ENSIPUG00000020692patl25335.925ENSOANG00000011117-9035.925Ornithorhynchus_anatinus
ENSIPUG00000020692patl25635.731ENSOCUG00000002156PATL16733.083Oryctolagus_cuniculus
ENSIPUG00000020692patl25744.472ENSOCUG00000006339PATL27844.472Oryctolagus_cuniculus
ENSIPUG00000020692patl210052.381ENSORLG00000005780patl210053.379Oryzias_latipes
ENSIPUG00000020692patl210052.454ENSORLG00020016506patl29753.417Oryzias_latipes_hni
ENSIPUG00000020692patl25638.010ENSORLG00015022240patl15037.340Oryzias_latipes_hsok
ENSIPUG00000020692patl210052.521ENSORLG00015014500patl210053.517Oryzias_latipes_hsok
ENSIPUG00000020692patl210052.072ENSOMEG00000021628patl210052.762Oryzias_melastigma
ENSIPUG00000020692patl25635.971ENSOGAG00000004351PATL16733.962Otolemur_garnettii
ENSIPUG00000020692patl26444.592ENSOGAG00000004709PATL28144.592Otolemur_garnettii
ENSIPUG00000020692patl25744.254ENSOARG00000003762PATL27544.254Ovis_aries
ENSIPUG00000020692patl26344.244ENSPPAG00000007221PATL27944.545Pan_paniscus
ENSIPUG00000020692patl25636.211ENSPPAG00000034275PATL19830.223Pan_paniscus
ENSIPUG00000020692patl26444.568ENSPPRG00000004279PATL28244.568Panthera_pardus
ENSIPUG00000020692patl26444.789ENSPTIG00000018964PATL28244.789Panthera_tigris_altaica
ENSIPUG00000020692patl26344.244ENSPTRG00000041536PATL27944.545Pan_troglodytes
ENSIPUG00000020692patl26444.866ENSPANG00000018026PATL28244.719Papio_anubis
ENSIPUG00000020692patl29956.101ENSPKIG00000016887patl29956.101Paramormyrops_kingsleyae
ENSIPUG00000020692patl26036.170ENSPKIG00000016224patl15636.215Paramormyrops_kingsleyae
ENSIPUG00000020692patl25835.648ENSPSIG00000016206PATL15635.033Pelodiscus_sinensis
ENSIPUG00000020692patl25747.291ENSPSIG00000017690PATL29447.244Pelodiscus_sinensis
ENSIPUG00000020692patl29651.970ENSPMGG00000014550patl29950.751Periophthalmus_magnuspinnatus
ENSIPUG00000020692patl25638.060ENSPMGG00000002644patl15737.168Periophthalmus_magnuspinnatus
ENSIPUG00000020692patl25834.660ENSPEMG00000014215Patl16833.396Peromyscus_maniculatus_bairdii
ENSIPUG00000020692patl25944.019ENSPEMG00000016509Patl27844.019Peromyscus_maniculatus_bairdii
ENSIPUG00000020692patl25936.054ENSPCIG00000010852PATL15735.682Phascolarctos_cinereus
ENSIPUG00000020692patl26146.495ENSPCIG00000018256PATL28646.495Phascolarctos_cinereus
ENSIPUG00000020692patl25638.653ENSPFOG00000007768patl16035.236Poecilia_formosa
ENSIPUG00000020692patl210054.342ENSPFOG00000007305patl210054.902Poecilia_formosa
ENSIPUG00000020692patl210054.202ENSPLAG00000020713patl210053.177Poecilia_latipinna
ENSIPUG00000020692patl25638.500ENSPLAG00000018465patl15835.108Poecilia_latipinna
ENSIPUG00000020692patl210053.922ENSPMEG00000018942patl210054.622Poecilia_mexicana
ENSIPUG00000020692patl25638.500ENSPMEG00000006555patl15935.108Poecilia_mexicana
ENSIPUG00000020692patl28448.293ENSPREG00000023066patl29946.870Poecilia_reticulata
ENSIPUG00000020692patl25635.971ENSPPYG00000003230PATL16733.962Pongo_abelii
ENSIPUG00000020692patl25635.971ENSPCOG00000020770PATL15635.601Propithecus_coquereli
ENSIPUG00000020692patl26444.690ENSPCOG00000000295PATL29946.648Propithecus_coquereli
ENSIPUG00000020692patl26032.251ENSPVAG00000015239PATL16632.176Pteropus_vampyrus
ENSIPUG00000020692patl29754.423ENSPNYG00000017381patl29854.723Pundamilia_nyererei
ENSIPUG00000020692patl25636.816ENSPNAG00000017907patl15336.782Pygocentrus_nattereri
ENSIPUG00000020692patl210074.530ENSPNAG00000002315patl210074.819Pygocentrus_nattereri
ENSIPUG00000020692patl25944.048ENSRNOG00000017061Patl27843.810Rattus_norvegicus
ENSIPUG00000020692patl25835.129ENSRNOG00000021052Patl16733.083Rattus_norvegicus
ENSIPUG00000020692patl26542.826ENSRBIG00000040369PATL28143.111Rhinopithecus_bieti
ENSIPUG00000020692patl26543.046ENSRROG00000028786PATL28143.333Rhinopithecus_roxellana
ENSIPUG00000020692patl25635.971ENSRROG00000032861PATL16734.151Rhinopithecus_roxellana
ENSIPUG00000020692patl26244.064ENSSBOG00000034766PATL27944.521Saimiri_boliviensis_boliviensis
ENSIPUG00000020692patl25935.616ENSSHAG00000004309PATL15635.388Sarcophilus_harrisii
ENSIPUG00000020692patl29256.456ENSSFOG00015000720patl29855.119Scleropages_formosus
ENSIPUG00000020692patl29653.144ENSSMAG00000017262patl210053.284Scophthalmus_maximus
ENSIPUG00000020692patl25637.750ENSSMAG00000009482patl15137.731Scophthalmus_maximus
ENSIPUG00000020692patl210054.951ENSSDUG00000022927patl210055.216Seriola_dumerili
ENSIPUG00000020692patl29654.790ENSSLDG00000017922patl210054.692Seriola_lalandi_dorsalis
ENSIPUG00000020692patl25637.531ENSSLDG00000019146patl15237.529Seriola_lalandi_dorsalis
ENSIPUG00000020692patl25635.407ENSSARG00000009600PATL15735.135Sorex_araneus
ENSIPUG00000020692patl25443.229ENSSARG00000009047PATL27743.229Sorex_araneus
ENSIPUG00000020692patl25153.258ENSSPUG00000019065PATL210053.258Sphenodon_punctatus
ENSIPUG00000020692patl26036.261ENSSPUG00000009453PATL15736.036Sphenodon_punctatus
ENSIPUG00000020692patl25637.500ENSSPAG00000003187patl15238.060Stegastes_partitus
ENSIPUG00000020692patl29653.823ENSSPAG00000004784patl210053.800Stegastes_partitus
ENSIPUG00000020692patl25735.084ENSSSCG00000013124PATL19830.942Sus_scrofa
ENSIPUG00000020692patl28737.442ENSTGUG00000006222PATL15737.246Taeniopygia_guttata
ENSIPUG00000020692patl25349.608ENSTGUG00000004619-9749.742Taeniopygia_guttata
ENSIPUG00000020692patl29854.758ENSTRUG00000005647patl29854.758Takifugu_rubripes
ENSIPUG00000020692patl25638.636ENSTRUG00000000709patl15138.889Takifugu_rubripes
ENSIPUG00000020692patl25635.176ENSTTRG00000009389PATL16035.013Tursiops_truncatus
ENSIPUG00000020692patl26444.643ENSUAMG00000018533PATL28044.643Ursus_americanus
ENSIPUG00000020692patl26444.789ENSUMAG00000007738PATL28044.789Ursus_maritimus
ENSIPUG00000020692patl26035.080ENSUMAG00000018634PATL16435.214Ursus_maritimus
ENSIPUG00000020692patl26444.912ENSVVUG00000011576PATL28245.212Vulpes_vulpes
ENSIPUG00000020692patl26034.763ENSVVUG00000016668PATL16334.989Vulpes_vulpes
ENSIPUG00000020692patl27844.759ENSXETG00000014167patl29845.378Xenopus_tropicalis
ENSIPUG00000020692patl25738.287ENSXCOG00000010808patl18235.556Xiphophorus_couchianus
ENSIPUG00000020692patl25638.404ENSXMAG00000013834patl15835.039Xiphophorus_maculatus
ENSIPUG00000020692patl29853.759ENSXMAG00000018464patl210052.999Xiphophorus_maculatus

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