EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000020910 (Gene tree)
Gene ID: 108258965
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 28655 bases
Position: chr26:11960664-11989318
Accession: 108258965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031003	IF-2	PF11987.8	3.6e-18	1	1
ENSIPUP00000031026	IF-2	PF11987.8	4.1e-18	1	1
ENSIPUP00000031026	GTP_EFTU	PF00009.27	4.9e-33	1	1
ENSIPUP00000031003	GTP_EFTU	PF00009.27	5.2e-33	1	1
ENSIPUP00000031026	MMR_HSR1	PF01926.23	3e-07	1	1
ENSIPUP00000031003	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032245	-	6227	XM_017458035	ENSIPUP00000031003	1202 (aa)	XP_017313524	A0A2D0Q5E3
ENSIPUT00000032268	-	6909	XM_017458036	ENSIPUP00000031026	1163 (aa)	XP_017313525	A0A2D0Q832

Gene Model

Click here to download ENSIPUG00000020910's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020910	eif5b	76	83.258	ENSAPOG00000004375	eif5b	100	74.669	Acanthochromis_polyacanthus
ENSIPUG00000020910	eif5b	72	84.661	ENSACIG00000024324	eif5b	81	84.161	Amphilophus_citrinellus
ENSIPUG00000020910	eif5b	100	75.825	ENSAOCG00000018386	eif5b	100	76.155	Amphiprion_ocellaris
ENSIPUG00000020910	eif5b	76	84.842	ENSATEG00000006765	eif5b	98	74.589	Anabas_testudineus
ENSIPUG00000020910	eif5b	52	93.355	ENSATEG00000011451	-	79	77.041	Anabas_testudineus
ENSIPUG00000020910	eif5b	76	81.222	ENSATEG00000011259	eif5b	87	80.430	Anabas_testudineus
ENSIPUG00000020910	eif5b	100	69.494	ENSACAG00000008305	-	74	79.148	Anolis_carolinensis
ENSIPUG00000020910	eif5b	100	82.179	ENSAMXG00000018383	eif5b	97	83.333	Astyanax_mexicanus
ENSIPUG00000020910	eif5b	53	56.913	WBGene00021857	iffb-1	58	56.913	Caenorhabditis_elegans
ENSIPUG00000020910	eif5b	97	65.217	ENSCJAG00000009960	-	70	73.666	Callithrix_jacchus
ENSIPUG00000020910	eif5b	99	65.590	ENSCAPG00000014619	-	73	74.266	Cavia_aperea
ENSIPUG00000020910	eif5b	100	68.810	ENSCPOG00000011967	-	100	68.332	Cavia_porcellus
ENSIPUG00000020910	eif5b	58	66.035	ENSCHOG00000002137	-	55	81.336	Choloepus_hoffmanni
ENSIPUG00000020910	eif5b	53	63.961	ENSCSAVG00000008808	-	66	63.961	Ciona_savignyi
ENSIPUG00000020910	eif5b	53	91.640	ENSCSEG00000014153	eif5b	100	72.195	Cynoglossus_semilaevis
ENSIPUG00000020910	eif5b	76	82.274	ENSCVAG00000019619	eif5b	100	73.262	Cyprinodon_variegatus
ENSIPUG00000020910	eif5b	100	80.379	ENSDARG00000016548	eif5b	95	80.016	Danio_rerio
ENSIPUG00000020910	eif5b	53	70.310	FBgn0026259	eIF5B	54	70.310	Drosophila_melanogaster
ENSIPUG00000020910	eif5b	56	87.711	ENSELUG00000001132	eif5b	95	90.792	Esox_lucius
ENSIPUG00000020910	eif5b	76	75.591	ENSGMOG00000002031	eif5b	72	75.648	Gadus_morhua
ENSIPUG00000020910	eif5b	60	91.239	ENSGAFG00000000088	eif5b	72	91.239	Gambusia_affinis
ENSIPUG00000020910	eif5b	53	89.855	ENSGACG00000010536	eif5b	85	89.855	Gasterosteus_aculeatus
ENSIPUG00000020910	eif5b	53	89.068	ENSGAGG00000022242	-	92	89.068	Gopherus_agassizii
ENSIPUG00000020910	eif5b	76	84.294	ENSHBUG00000023319	eif5b	100	73.208	Haplochromis_burtoni
ENSIPUG00000020910	eif5b	100	73.306	ENSHCOG00000002807	eif5b	100	73.366	Hippocampus_comes
ENSIPUG00000020910	eif5b	76	83.616	ENSKMAG00000004325	eif5b	100	73.585	Kryptolebias_marmoratus
ENSIPUG00000020910	eif5b	77	78.492	ENSLBEG00000027090	eif5b	81	78.989	Labrus_bergylta
ENSIPUG00000020910	eif5b	53	87.879	ENSLACG00000011688	eif5b	73	78.333	Latimeria_chalumnae
ENSIPUG00000020910	eif5b	100	74.207	ENSMAMG00000022568	eif5b	100	74.857	Mastacembelus_armatus
ENSIPUG00000020910	eif5b	76	84.181	ENSMZEG00005012696	eif5b	100	72.905	Maylandia_zebra
ENSIPUG00000020910	eif5b	88	70.583	ENSMODG00000001387	-	52	88.746	Monodelphis_domestica
ENSIPUG00000020910	eif5b	85	79.394	ENSMALG00000005862	eif5b	100	73.153	Monopterus_albus
ENSIPUG00000020910	eif5b	80	80.565	ENSNBRG00000021912	eif5b	100	69.694	Neolamprologus_brichardi
ENSIPUG00000020910	eif5b	76	89.510	ENSMEUG00000007080	-	81	89.510	Notamacropus_eugenii
ENSIPUG00000020910	eif5b	76	84.181	ENSONIG00000018749	eif5b	100	73.788	Oreochromis_niloticus
ENSIPUG00000020910	eif5b	99	67.208	ENSOCUG00000021154	-	95	68.052	Oryctolagus_cuniculus
ENSIPUG00000020910	eif5b	85	80.746	ENSORLG00000001525	eif5b	100	73.438	Oryzias_latipes
ENSIPUG00000020910	eif5b	100	73.289	ENSORLG00020005327	eif5b	100	73.723	Oryzias_latipes_hni
ENSIPUG00000020910	eif5b	100	73.124	ENSORLG00015008949	eif5b	100	73.680	Oryzias_latipes_hsok
ENSIPUG00000020910	eif5b	69	82.832	ENSOMEG00000016539	eif5b	99	83.083	Oryzias_melastigma
ENSIPUG00000020910	eif5b	100	73.577	ENSPKIG00000011133	eif5b	100	73.312	Paramormyrops_kingsleyae
ENSIPUG00000020910	eif5b	60	77.841	ENSPSIG00000014914	-	93	76.554	Pelodiscus_sinensis
ENSIPUG00000020910	eif5b	77	65.295	ENSPMAG00000004508	eif5b	73	65.807	Petromyzon_marinus
ENSIPUG00000020910	eif5b	63	84.417	ENSPFOG00000007543	eif5b	99	85.306	Poecilia_formosa
ENSIPUG00000020910	eif5b	100	72.757	ENSPLAG00000015913	eif5b	100	73.077	Poecilia_latipinna
ENSIPUG00000020910	eif5b	53	91.961	ENSPMEG00000006712	eif5b	100	72.473	Poecilia_mexicana
ENSIPUG00000020910	eif5b	68	72.864	ENSPCAG00000007829	-	65	72.487	Procavia_capensis
ENSIPUG00000020910	eif5b	100	66.103	ENSPCOG00000019508	-	99	88.387	Propithecus_coquereli
ENSIPUG00000020910	eif5b	81	88.158	ENSPVAG00000006592	-	94	77.538	Pteropus_vampyrus
ENSIPUG00000020910	eif5b	80	80.834	ENSPNYG00000021051	eif5b	100	70.050	Pundamilia_nyererei
ENSIPUG00000020910	eif5b	76	90.192	ENSPNAG00000023852	eif5b	100	84.943	Pygocentrus_nattereri
ENSIPUG00000020910	eif5b	51	50.997	YAL035W	FUN12	60	50.825	Saccharomyces_cerevisiae
ENSIPUG00000020910	eif5b	100	75.610	ENSSFOG00015000594	eif5b	100	75.711	Scleropages_formosus
ENSIPUG00000020910	eif5b	85	73.860	ENSSMAG00000000045	eif5b	81	79.787	Scophthalmus_maximus
ENSIPUG00000020910	eif5b	72	83.115	ENSSDUG00000005847	eif5b	82	82.409	Seriola_dumerili
ENSIPUG00000020910	eif5b	72	83.115	ENSSLDG00000013738	eif5b	83	82.527	Seriola_lalandi_dorsalis
ENSIPUG00000020910	eif5b	83	86.174	ENSSPAG00000005335	eif5b	61	86.174	Stegastes_partitus
ENSIPUG00000020910	eif5b	71	79.512	ENSTRUG00000007772	eif5b	81	79.527	Takifugu_rubripes
ENSIPUG00000020910	eif5b	78	76.129	ENSTNIG00000006580	eif5b	95	78.319	Tetraodon_nigroviridis
ENSIPUG00000020910	eif5b	79	77.922	ENSXCOG00000016681	eif5b	94	79.932	Xiphophorus_couchianus
ENSIPUG00000020910	eif5b	79	78.091	ENSXMAG00000001002	eif5b	94	80.113	Xiphophorus_maculatus