EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000020925 (Gene tree)
Gene ID: 108278860
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 9918 bases
Position: chr18:253527-263444
Accession: 108278860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031044	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032286	-	798	XM_017492512	ENSIPUP00000031044	198 (aa)	XP_017348001	A0A2D0SZP4

Gene Model

Click here to download ENSIPUG00000020925's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000020925	sar1b	66	36.842	ENSIPUG00000020344	-	81	36.842
ENSIPUG00000020925	sar1b	73	34.228	ENSIPUG00000006298	-	75	34.228
ENSIPUG00000020925	sar1b	87	30.814	ENSIPUG00000004215	arf5	89	30.814
ENSIPUG00000020925	sar1b	64	35.385	ENSIPUG00000024239	ARL6	75	35.385
ENSIPUG00000020925	sar1b	87	30.233	ENSIPUG00000004159	Arf5	89	30.233
ENSIPUG00000020925	sar1b	66	31.618	ENSIPUG00000019342	Arl4d	68	31.618
ENSIPUG00000020925	sar1b	94	31.183	ENSIPUG00000019792	arl3l1	93	31.183
ENSIPUG00000020925	sar1b	95	30.570	ENSIPUG00000002122	arl4cb	92	30.570
ENSIPUG00000020925	sar1b	100	85.354	ENSIPUG00000024669	SAR1B	100	85.354
ENSIPUG00000020925	sar1b	100	86.869	ENSIPUG00000010046	sar1b	100	86.869
ENSIPUG00000020925	sar1b	64	34.848	ENSIPUG00000021618	arl4ab	68	34.848
ENSIPUG00000020925	sar1b	67	35.766	ENSIPUG00000024159	arl4a	69	35.766
ENSIPUG00000020925	sar1b	92	30.055	ENSIPUG00000003931	arl2	93	30.055

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020925	sar1b	100	92.424	ENSAPOG00000007186	sar1b	100	92.424	Acanthochromis_polyacanthus
ENSIPUG00000020925	sar1b	100	84.848	ENSAPOG00000017891	-	100	84.848	Acanthochromis_polyacanthus
ENSIPUG00000020925	sar1b	100	83.333	ENSACIG00000024513	-	100	83.333	Amphilophus_citrinellus
ENSIPUG00000020925	sar1b	100	91.919	ENSACIG00000013634	sar1b	100	91.919	Amphilophus_citrinellus
ENSIPUG00000020925	sar1b	100	91.919	ENSAOCG00000005888	sar1b	100	91.919	Amphiprion_ocellaris
ENSIPUG00000020925	sar1b	100	84.848	ENSAOCG00000002627	-	100	84.848	Amphiprion_ocellaris
ENSIPUG00000020925	sar1b	100	91.919	ENSAPEG00000022771	sar1b	100	91.919	Amphiprion_percula
ENSIPUG00000020925	sar1b	100	84.848	ENSAPEG00000019680	-	100	84.848	Amphiprion_percula
ENSIPUG00000020925	sar1b	100	90.909	ENSATEG00000012904	sar1b	100	90.909	Anabas_testudineus
ENSIPUG00000020925	sar1b	100	82.323	ENSATEG00000023368	-	100	82.323	Anabas_testudineus
ENSIPUG00000020925	sar1b	100	90.404	ENSACAG00000001470	-	100	90.404	Anolis_carolinensis
ENSIPUG00000020925	sar1b	100	91.919	ENSACLG00000014649	sar1b	100	91.919	Astatotilapia_calliptera
ENSIPUG00000020925	sar1b	100	84.343	ENSACLG00000005011	-	100	84.343	Astatotilapia_calliptera
ENSIPUG00000020925	sar1b	59	96.581	ENSAMXG00000018108	sar1b	84	96.581	Astyanax_mexicanus
ENSIPUG00000020925	sar1b	100	86.364	ENSAMXG00000034192	-	91	86.364	Astyanax_mexicanus
ENSIPUG00000020925	sar1b	100	84.343	ENSCSEG00000016976	-	100	84.343	Cynoglossus_semilaevis
ENSIPUG00000020925	sar1b	100	85.859	ENSCSEG00000015238	sar1b	97	85.859	Cynoglossus_semilaevis
ENSIPUG00000020925	sar1b	100	93.939	ENSCVAG00000022959	sar1b	100	93.939	Cyprinodon_variegatus
ENSIPUG00000020925	sar1b	100	96.970	ENSDARG00000103403	sar1b	100	96.970	Danio_rerio
ENSIPUG00000020925	sar1b	99	71.429	FBgn0038947	Sar1	99	71.429	Drosophila_melanogaster
ENSIPUG00000020925	sar1b	97	86.458	ENSEBUG00000011723	sar1b	97	86.458	Eptatretus_burgeri
ENSIPUG00000020925	sar1b	100	96.465	ENSELUG00000020912	sar1b	100	96.465	Esox_lucius
ENSIPUG00000020925	sar1b	100	92.424	ENSFHEG00000019865	sar1b	100	92.424	Fundulus_heteroclitus
ENSIPUG00000020925	sar1b	100	94.444	ENSGMOG00000008023	sar1b	100	94.444	Gadus_morhua
ENSIPUG00000020925	sar1b	100	91.414	ENSGAFG00000007081	sar1b	100	91.414	Gambusia_affinis
ENSIPUG00000020925	sar1b	100	90.404	ENSGACG00000001474	sar1b	100	90.404	Gasterosteus_aculeatus
ENSIPUG00000020925	sar1b	100	84.343	ENSHBUG00000018397	-	100	84.343	Haplochromis_burtoni
ENSIPUG00000020925	sar1b	100	91.919	ENSHBUG00000000915	sar1b	100	91.919	Haplochromis_burtoni
ENSIPUG00000020925	sar1b	100	92.929	ENSHCOG00000010953	sar1b	100	92.929	Hippocampus_comes
ENSIPUG00000020925	sar1b	100	83.333	ENSKMAG00000014875	-	100	83.333	Kryptolebias_marmoratus
ENSIPUG00000020925	sar1b	100	92.929	ENSKMAG00000019693	sar1b	100	92.929	Kryptolebias_marmoratus
ENSIPUG00000020925	sar1b	100	85.354	ENSLBEG00000016945	-	100	85.354	Labrus_bergylta
ENSIPUG00000020925	sar1b	100	88.889	ENSLBEG00000027550	sar1b	100	88.889	Labrus_bergylta
ENSIPUG00000020925	sar1b	100	86.869	ENSLACG00000010795	sar1b	100	86.869	Latimeria_chalumnae
ENSIPUG00000020925	sar1b	100	74.874	ENSLACG00000017029	-	100	74.874	Latimeria_chalumnae
ENSIPUG00000020925	sar1b	100	90.909	ENSLOCG00000005214	-	100	90.909	Lepisosteus_oculatus
ENSIPUG00000020925	sar1b	100	95.455	ENSLOCG00000010197	sar1b	100	95.455	Lepisosteus_oculatus
ENSIPUG00000020925	sar1b	100	90.404	ENSMAMG00000021732	sar1b	100	90.404	Mastacembelus_armatus
ENSIPUG00000020925	sar1b	100	84.343	ENSMZEG00005001012	-	100	84.343	Maylandia_zebra
ENSIPUG00000020925	sar1b	100	91.919	ENSMZEG00005008942	sar1b	100	91.919	Maylandia_zebra
ENSIPUG00000020925	sar1b	90	91.620	ENSMGAG00000005387	-	91	91.620	Meleagris_gallopavo
ENSIPUG00000020925	sar1b	100	83.333	ENSMMOG00000013803	-	100	83.333	Mola_mola
ENSIPUG00000020925	sar1b	100	93.434	ENSMALG00000016635	sar1b	97	92.308	Monopterus_albus
ENSIPUG00000020925	sar1b	100	91.414	ENSNBRG00000008013	sar1b	100	91.414	Neolamprologus_brichardi
ENSIPUG00000020925	sar1b	100	84.343	ENSNBRG00000014004	-	100	84.343	Neolamprologus_brichardi
ENSIPUG00000020925	sar1b	100	92.424	ENSONIG00000017278	sar1b	100	92.424	Oreochromis_niloticus
ENSIPUG00000020925	sar1b	100	91.414	ENSORLG00000000932	sar1b	100	91.414	Oryzias_latipes
ENSIPUG00000020925	sar1b	100	91.414	ENSORLG00020021985	sar1b	100	91.414	Oryzias_latipes_hni
ENSIPUG00000020925	sar1b	100	91.414	ENSORLG00015007044	sar1b	100	91.414	Oryzias_latipes_hsok
ENSIPUG00000020925	sar1b	100	91.414	ENSOMEG00000001052	sar1b	100	91.414	Oryzias_melastigma
ENSIPUG00000020925	sar1b	100	93.434	ENSPKIG00000017353	-	100	93.434	Paramormyrops_kingsleyae
ENSIPUG00000020925	sar1b	100	92.424	ENSPKIG00000010688	sar1b	100	92.424	Paramormyrops_kingsleyae
ENSIPUG00000020925	sar1b	59	92.241	ENSPMGG00000001234	sar1b	91	92.241	Periophthalmus_magnuspinnatus
ENSIPUG00000020925	sar1b	100	84.577	ENSPMAG00000003593	sar1b	100	84.577	Petromyzon_marinus
ENSIPUG00000020925	sar1b	100	90.909	ENSPFOG00000005666	sar1b	100	90.909	Poecilia_formosa
ENSIPUG00000020925	sar1b	100	91.414	ENSPLAG00000012223	sar1b	100	91.414	Poecilia_latipinna
ENSIPUG00000020925	sar1b	59	88.034	ENSPLAG00000001016	-	75	88.034	Poecilia_latipinna
ENSIPUG00000020925	sar1b	100	90.909	ENSPMEG00000016831	sar1b	100	90.909	Poecilia_mexicana
ENSIPUG00000020925	sar1b	60	87.288	ENSPREG00000002020	-	87	87.288	Poecilia_reticulata
ENSIPUG00000020925	sar1b	100	90.909	ENSPREG00000005312	sar1b	90	90.909	Poecilia_reticulata
ENSIPUG00000020925	sar1b	100	91.919	ENSPNYG00000012440	sar1b	100	91.919	Pundamilia_nyererei
ENSIPUG00000020925	sar1b	100	84.343	ENSPNYG00000021357	-	100	84.343	Pundamilia_nyererei
ENSIPUG00000020925	sar1b	100	87.374	ENSPNAG00000001123	-	100	87.374	Pygocentrus_nattereri
ENSIPUG00000020925	sar1b	100	96.970	ENSPNAG00000014683	sar1b	100	96.970	Pygocentrus_nattereri
ENSIPUG00000020925	sar1b	100	95.960	ENSSFOG00015020051	sar1b	100	95.960	Scleropages_formosus
ENSIPUG00000020925	sar1b	100	93.434	ENSSFOG00015018128	-	100	93.434	Scleropages_formosus
ENSIPUG00000020925	sar1b	100	84.848	ENSSMAG00000002165	-	100	84.848	Scophthalmus_maximus
ENSIPUG00000020925	sar1b	100	90.404	ENSSMAG00000007106	sar1b	80	90.404	Scophthalmus_maximus
ENSIPUG00000020925	sar1b	100	84.343	ENSSDUG00000019629	-	100	84.343	Seriola_dumerili
ENSIPUG00000020925	sar1b	100	92.424	ENSSDUG00000020926	sar1b	100	92.424	Seriola_dumerili
ENSIPUG00000020925	sar1b	100	84.343	ENSSLDG00000024197	-	100	84.343	Seriola_lalandi_dorsalis
ENSIPUG00000020925	sar1b	100	92.424	ENSSLDG00000017052	sar1b	100	92.424	Seriola_lalandi_dorsalis
ENSIPUG00000020925	sar1b	100	91.414	ENSSPUG00000010247	-	100	91.414	Sphenodon_punctatus
ENSIPUG00000020925	sar1b	100	92.929	ENSSPAG00000017634	sar1b	100	92.929	Stegastes_partitus
ENSIPUG00000020925	sar1b	100	84.343	ENSSPAG00000015626	-	100	84.343	Stegastes_partitus
ENSIPUG00000020925	sar1b	100	87.374	ENSTRUG00000023908	sar1b	100	87.374	Takifugu_rubripes
ENSIPUG00000020925	sar1b	100	88.384	ENSTNIG00000016097	sar1b	100	88.384	Tetraodon_nigroviridis
ENSIPUG00000020925	sar1b	61	85.000	ENSXCOG00000006154	-	81	85.000	Xiphophorus_couchianus
ENSIPUG00000020925	sar1b	90	92.135	ENSXCOG00000004160	sar1b	87	92.135	Xiphophorus_couchianus
ENSIPUG00000020925	sar1b	100	91.414	ENSXMAG00000008294	sar1b	100	91.414	Xiphophorus_maculatus