EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000020981 (Gene tree)
Gene ID: 108259650
Gene Symbol: RBPMS
Alias: Hermes|rbpms2|zgc:55559|zgc:77170
Full Name: RNA-binding protein with multiple splicing
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 15901 bases
Position: chr27:8978216-8994116
Accession: 108259650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031162	RRM_1	PF00076.22	6.1e-12	1	1
ENSIPUP00000031152	RRM_1	PF00076.22	7e-12	1	1
ENSIPUP00000031168	RRM_1	PF00076.22	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032410	-	1308	-	ENSIPUP00000031162	181 (aa)	-	-
ENSIPUT00000032416	-	1587	-	ENSIPUP00000031168	200 (aa)	-	-
ENSIPUT00000032399	-	2520	XM_017459297	ENSIPUP00000031152	197 (aa)	XP_017314786	W5UTG3

Gene Model

Click here to download ENSIPUG00000020981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000020981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000020981	RBPMS	99	71.823	ENSIPUG00000012459	RBPMS	98	68.878
ENSIPUG00000020981	RBPMS	99	88.950	ENSIPUG00000014032	RBPMS	100	89.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000020981	RBPMS	99	81.768	ENSG00000166831	RBPMS2	100	77.778	Homo_sapiens
ENSIPUG00000020981	RBPMS	99	89.503	ENSAPOG00000007842	rbpms2b	100	89.950	Acanthochromis_polyacanthus
ENSIPUG00000020981	RBPMS	99	81.319	ENSAMEG00000002664	RBPMS2	89	82.979	Ailuropoda_melanoleuca
ENSIPUG00000020981	RBPMS	99	89.503	ENSACIG00000013696	rbpms2b	74	88.384	Amphilophus_citrinellus
ENSIPUG00000020981	RBPMS	99	89.503	ENSAOCG00000000105	rbpms2b	73	89.447	Amphiprion_ocellaris
ENSIPUG00000020981	RBPMS	99	89.503	ENSAPEG00000001705	rbpms2b	100	89.447	Amphiprion_percula
ENSIPUG00000020981	RBPMS	99	89.503	ENSATEG00000020326	rbpms2b	74	89.950	Anabas_testudineus
ENSIPUG00000020981	RBPMS	99	87.845	ENSAPLG00000004799	RBPMS2	95	85.714	Anas_platyrhynchos
ENSIPUG00000020981	RBPMS	78	93.662	ENSACAG00000012227	RBPMS2	100	92.547	Anolis_carolinensis
ENSIPUG00000020981	RBPMS	99	81.768	ENSANAG00000014652	RBPMS2	92	83.069	Aotus_nancymaae
ENSIPUG00000020981	RBPMS	99	89.503	ENSACLG00000012769	rbpms2b	74	89.950	Astatotilapia_calliptera
ENSIPUG00000020981	RBPMS	100	85.784	ENSAMXG00000036507	rbpms2a	100	87.745	Astyanax_mexicanus
ENSIPUG00000020981	RBPMS	99	96.685	ENSAMXG00000037525	rbpms2b	100	94.000	Astyanax_mexicanus
ENSIPUG00000020981	RBPMS	82	54.362	ENSBTAG00000049268	-	66	53.125	Bos_taurus
ENSIPUG00000020981	RBPMS	99	82.320	ENSBTAG00000011037	RBPMS2	89	84.127	Bos_taurus
ENSIPUG00000020981	RBPMS	99	81.215	ENSCJAG00000005200	RBPMS2	90	82.540	Callithrix_jacchus
ENSIPUG00000020981	RBPMS	99	81.319	ENSCAFG00000017098	RBPMS2	88	82.632	Canis_familiaris
ENSIPUG00000020981	RBPMS	99	81.319	ENSCAFG00020008908	RBPMS2	88	82.632	Canis_lupus_dingo
ENSIPUG00000020981	RBPMS	99	81.215	ENSCHIG00000024439	RBPMS2	91	85.083	Capra_hircus
ENSIPUG00000020981	RBPMS	95	74.138	ENSTSYG00000033527	-	87	75.429	Carlito_syrichta
ENSIPUG00000020981	RBPMS	99	80.769	ENSTSYG00000008996	-	84	84.066	Carlito_syrichta
ENSIPUG00000020981	RBPMS	99	80.556	ENSCAPG00000015689	RBPMS2	100	80.556	Cavia_aperea
ENSIPUG00000020981	RBPMS	99	80.556	ENSCPOG00000007695	RBPMS2	100	80.556	Cavia_porcellus
ENSIPUG00000020981	RBPMS	99	81.768	ENSCCAG00000036496	RBPMS2	90	83.069	Cebus_capucinus
ENSIPUG00000020981	RBPMS	99	81.215	ENSCATG00000042116	RBPMS2	91	81.771	Cercocebus_atys
ENSIPUG00000020981	RBPMS	99	83.333	ENSCLAG00000016082	RBPMS2	100	83.333	Chinchilla_lanigera
ENSIPUG00000020981	RBPMS	99	81.215	ENSCSAG00000012562	RBPMS2	83	84.615	Chlorocebus_sabaeus
ENSIPUG00000020981	RBPMS	99	87.845	ENSCPBG00000006048	RBPMS2	98	87.006	Chrysemys_picta_bellii
ENSIPUG00000020981	RBPMS	99	80.220	ENSCGRG00001014627	Rbpms2	89	82.796	Cricetulus_griseus_chok1gshd
ENSIPUG00000020981	RBPMS	99	80.220	ENSCGRG00000005899	Rbpms2	100	82.967	Cricetulus_griseus_crigri
ENSIPUG00000020981	RBPMS	99	89.503	ENSCVAG00000004878	rbpms2b	77	90.452	Cyprinodon_variegatus
ENSIPUG00000020981	RBPMS	99	89.503	ENSDARG00000045930	rbpms2a	100	90.452	Danio_rerio
ENSIPUG00000020981	RBPMS	99	96.703	ENSDARG00000079578	rbpms2b	100	96.648	Danio_rerio
ENSIPUG00000020981	RBPMS	99	81.868	ENSDNOG00000048895	RBPMS2	89	85.165	Dasypus_novemcinctus
ENSIPUG00000020981	RBPMS	99	72.222	ENSDORG00000023373	-	99	70.681	Dipodomys_ordii
ENSIPUG00000020981	RBPMS	99	83.889	ENSDORG00000004025	-	97	83.889	Dipodomys_ordii
ENSIPUG00000020981	RBPMS	99	82.682	ENSETEG00000010176	RBPMS2	94	82.682	Echinops_telfairi
ENSIPUG00000020981	RBPMS	99	74.863	ENSEBUG00000000297	RBPMS2	95	75.789	Eptatretus_burgeri
ENSIPUG00000020981	RBPMS	98	53.039	ENSEBUG00000005004	-	90	52.973	Eptatretus_burgeri
ENSIPUG00000020981	RBPMS	99	69.061	ENSEBUG00000012768	RBPMS2	93	73.171	Eptatretus_burgeri
ENSIPUG00000020981	RBPMS	99	81.868	ENSEASG00005006523	RBPMS2	87	84.946	Equus_asinus_asinus
ENSIPUG00000020981	RBPMS	99	81.868	ENSECAG00000015345	RBPMS2	84	85.165	Equus_caballus
ENSIPUG00000020981	RBPMS	99	92.265	ENSELUG00000023770	RBPMS	100	91.139	Esox_lucius
ENSIPUG00000020981	RBPMS	99	90.608	ENSELUG00000021784	rbpms2b	96	92.208	Esox_lucius
ENSIPUG00000020981	RBPMS	99	81.868	ENSFCAG00000032451	RBPMS2	90	83.158	Felis_catus
ENSIPUG00000020981	RBPMS	99	87.845	ENSFALG00000009836	RBPMS2	95	87.368	Ficedula_albicollis
ENSIPUG00000020981	RBPMS	99	83.889	ENSFDAG00000016154	RBPMS2	100	83.889	Fukomys_damarensis
ENSIPUG00000020981	RBPMS	99	89.503	ENSFHEG00000014766	rbpms2b	76	90.452	Fundulus_heteroclitus
ENSIPUG00000020981	RBPMS	99	91.713	ENSGMOG00000008502	rbpms2b	100	91.209	Gadus_morhua
ENSIPUG00000020981	RBPMS	99	87.845	ENSGALG00000030988	RBPMS2	99	85.930	Gallus_gallus
ENSIPUG00000020981	RBPMS	100	74.874	ENSGAFG00000002978	rbpms2b	100	77.387	Gambusia_affinis
ENSIPUG00000020981	RBPMS	99	87.293	ENSGACG00000017472	rbpms2b	100	89.560	Gasterosteus_aculeatus
ENSIPUG00000020981	RBPMS	99	87.293	ENSGAGG00000020044	RBPMS2	98	86.441	Gopherus_agassizii
ENSIPUG00000020981	RBPMS	99	81.768	ENSGGOG00000008984	RBPMS2	100	85.083	Gorilla_gorilla
ENSIPUG00000020981	RBPMS	99	89.503	ENSHBUG00000009135	rbpms2b	74	89.950	Haplochromis_burtoni
ENSIPUG00000020981	RBPMS	99	84.444	ENSHGLG00000008504	RBPMS2	89	84.153	Heterocephalus_glaber_female
ENSIPUG00000020981	RBPMS	99	84.444	ENSHGLG00100019122	RBPMS2	100	84.444	Heterocephalus_glaber_male
ENSIPUG00000020981	RBPMS	99	89.503	ENSHCOG00000018429	rbpms2b	100	89.394	Hippocampus_comes
ENSIPUG00000020981	RBPMS	99	81.868	ENSSTOG00000010055	RBPMS2	92	83.158	Ictidomys_tridecemlineatus
ENSIPUG00000020981	RBPMS	100	79.670	ENSJJAG00000001664	Rbpms2	98	79.082	Jaculus_jaculus
ENSIPUG00000020981	RBPMS	99	88.950	ENSKMAG00000002005	rbpms2b	69	88.945	Kryptolebias_marmoratus
ENSIPUG00000020981	RBPMS	76	92.701	ENSLBEG00000017287	rbpms2b	75	89.506	Labrus_bergylta
ENSIPUG00000020981	RBPMS	99	84.530	ENSLACG00000016999	RBPMS2	98	82.653	Latimeria_chalumnae
ENSIPUG00000020981	RBPMS	99	88.398	ENSLOCG00000015018	rbpms2b	99	88.325	Lepisosteus_oculatus
ENSIPUG00000020981	RBPMS	99	84.444	ENSLAFG00000018725	RBPMS2	100	83.978	Loxodonta_africana
ENSIPUG00000020981	RBPMS	99	80.663	ENSMFAG00000045343	RBPMS2	91	81.250	Macaca_fascicularis
ENSIPUG00000020981	RBPMS	99	80.663	ENSMMUG00000013270	RBPMS2	91	81.250	Macaca_mulatta
ENSIPUG00000020981	RBPMS	99	80.663	ENSMNEG00000019330	RBPMS2	91	81.250	Macaca_nemestrina
ENSIPUG00000020981	RBPMS	99	81.215	ENSMLEG00000035922	RBPMS2	100	84.530	Mandrillus_leucophaeus
ENSIPUG00000020981	RBPMS	99	89.503	ENSMAMG00000014149	rbpms2b	99	90.374	Mastacembelus_armatus
ENSIPUG00000020981	RBPMS	99	89.503	ENSMZEG00005013727	rbpms2b	100	89.950	Maylandia_zebra
ENSIPUG00000020981	RBPMS	100	87.363	ENSMGAG00000001128	RBPMS2	93	89.189	Meleagris_gallopavo
ENSIPUG00000020981	RBPMS	99	81.768	ENSMAUG00000019407	Rbpms2	96	83.978	Mesocricetus_auratus
ENSIPUG00000020981	RBPMS	99	81.215	ENSMICG00000029953	RBPMS2	90	82.105	Microcebus_murinus
ENSIPUG00000020981	RBPMS	99	81.215	ENSMOCG00000021603	Rbpms2	91	83.516	Microtus_ochrogaster
ENSIPUG00000020981	RBPMS	99	89.503	ENSMMOG00000002240	rbpms2b	95	89.175	Mola_mola
ENSIPUG00000020981	RBPMS	99	87.293	ENSMODG00000010487	RBPMS2	87	89.730	Monodelphis_domestica
ENSIPUG00000020981	RBPMS	99	82.778	ENSMALG00000014621	rbpms2b	73	80.808	Monopterus_albus
ENSIPUG00000020981	RBPMS	99	82.065	MGP_CAROLIEiJ_G0032367	Rbpms2	91	81.915	Mus_caroli
ENSIPUG00000020981	RBPMS	99	82.065	ENSMUSG00000032387	Rbpms2	91	81.915	Mus_musculus
ENSIPUG00000020981	RBPMS	99	82.967	MGP_PahariEiJ_G0015232	Rbpms2	89	83.333	Mus_pahari
ENSIPUG00000020981	RBPMS	99	82.065	MGP_SPRETEiJ_G0033506	Rbpms2	91	81.915	Mus_spretus
ENSIPUG00000020981	RBPMS	99	85.000	ENSMPUG00000000553	RBPMS2	97	80.412	Mustela_putorius_furo
ENSIPUG00000020981	RBPMS	78	87.324	ENSMLUG00000013394	RBPMS2	82	84.431	Myotis_lucifugus
ENSIPUG00000020981	RBPMS	99	82.514	ENSNGAG00000023569	Rbpms2	91	84.492	Nannospalax_galili
ENSIPUG00000020981	RBPMS	99	89.503	ENSNBRG00000019943	rbpms2b	74	89.447	Neolamprologus_brichardi
ENSIPUG00000020981	RBPMS	90	80.982	ENSOPRG00000013668	RBPMS2	100	80.982	Ochotona_princeps
ENSIPUG00000020981	RBPMS	99	83.333	ENSODEG00000016172	RBPMS2	95	83.333	Octodon_degus
ENSIPUG00000020981	RBPMS	99	89.503	ENSONIG00000005770	rbpms2b	100	89.950	Oreochromis_niloticus
ENSIPUG00000020981	RBPMS	61	93.694	ENSOANG00000011802	-	82	90.598	Ornithorhynchus_anatinus
ENSIPUG00000020981	RBPMS	99	80.769	ENSOCUG00000010388	RBPMS2	90	82.105	Oryctolagus_cuniculus
ENSIPUG00000020981	RBPMS	99	88.950	ENSORLG00000027223	rbpms2b	75	89.447	Oryzias_latipes
ENSIPUG00000020981	RBPMS	99	88.950	ENSORLG00020001166	rbpms2b	75	89.447	Oryzias_latipes_hni
ENSIPUG00000020981	RBPMS	99	88.950	ENSORLG00015001749	rbpms2b	75	88.889	Oryzias_latipes_hsok
ENSIPUG00000020981	RBPMS	99	89.503	ENSOMEG00000006495	rbpms2b	100	83.417	Oryzias_melastigma
ENSIPUG00000020981	RBPMS	99	80.110	ENSOGAG00000026017	RBPMS2	90	82.967	Otolemur_garnettii
ENSIPUG00000020981	RBPMS	99	81.768	ENSOARG00000020727	RBPMS2	88	84.324	Ovis_aries
ENSIPUG00000020981	RBPMS	99	81.768	ENSPPAG00000024456	RBPMS2	100	85.083	Pan_paniscus
ENSIPUG00000020981	RBPMS	99	81.868	ENSPPRG00000014944	RBPMS2	90	83.158	Panthera_pardus
ENSIPUG00000020981	RBPMS	99	81.868	ENSPTIG00000017879	RBPMS2	86	85.165	Panthera_tigris_altaica
ENSIPUG00000020981	RBPMS	99	81.768	ENSPTRG00000007165	RBPMS2	90	83.069	Pan_troglodytes
ENSIPUG00000020981	RBPMS	99	81.215	ENSPANG00000016754	RBPMS2	88	84.324	Papio_anubis
ENSIPUG00000020981	RBPMS	99	88.950	ENSPKIG00000022509	rbpms2a	100	89.950	Paramormyrops_kingsleyae
ENSIPUG00000020981	RBPMS	100	87.374	ENSPKIG00000012634	rbpms2b	100	87.374	Paramormyrops_kingsleyae
ENSIPUG00000020981	RBPMS	99	87.293	ENSPSIG00000013115	RBPMS2	100	90.055	Pelodiscus_sinensis
ENSIPUG00000020981	RBPMS	96	88.506	ENSPMGG00000021154	rbpms2b	98	82.741	Periophthalmus_magnuspinnatus
ENSIPUG00000020981	RBPMS	99	86.740	ENSPCIG00000029447	RBPMS2	99	82.843	Phascolarctos_cinereus
ENSIPUG00000020981	RBPMS	99	89.503	ENSPFOG00000016067	rbpms2b	100	90.452	Poecilia_formosa
ENSIPUG00000020981	RBPMS	99	89.503	ENSPLAG00000008831	rbpms2b	100	90.452	Poecilia_latipinna
ENSIPUG00000020981	RBPMS	99	89.503	ENSPMEG00000007868	rbpms2b	100	90.452	Poecilia_mexicana
ENSIPUG00000020981	RBPMS	99	87.634	ENSPREG00000005953	rbpms2b	100	88.235	Poecilia_reticulata
ENSIPUG00000020981	RBPMS	99	78.261	ENSPPYG00000006553	-	89	76.500	Pongo_abelii
ENSIPUG00000020981	RBPMS	99	82.222	ENSPCAG00000015797	RBPMS2	100	82.778	Procavia_capensis
ENSIPUG00000020981	RBPMS	99	84.444	ENSPCOG00000023778	RBPMS2	90	82.447	Propithecus_coquereli
ENSIPUG00000020981	RBPMS	99	80.220	ENSPVAG00000016622	RBPMS2	100	83.516	Pteropus_vampyrus
ENSIPUG00000020981	RBPMS	99	89.503	ENSPNYG00000010761	rbpms2b	74	89.950	Pundamilia_nyererei
ENSIPUG00000020981	RBPMS	99	97.790	ENSPNAG00000004816	rbpms2b	100	96.482	Pygocentrus_nattereri
ENSIPUG00000020981	RBPMS	100	87.437	ENSPNAG00000027343	rbpms2a	100	89.950	Pygocentrus_nattereri
ENSIPUG00000020981	RBPMS	99	83.516	ENSRNOG00000015896	Rbpms2	88	83.871	Rattus_norvegicus
ENSIPUG00000020981	RBPMS	99	81.215	ENSRROG00000006473	RBPMS2	90	84.066	Rhinopithecus_roxellana
ENSIPUG00000020981	RBPMS	99	81.768	ENSSBOG00000020118	RBPMS2	100	85.083	Saimiri_boliviensis_boliviensis
ENSIPUG00000020981	RBPMS	99	87.293	ENSSHAG00000007448	RBPMS2	100	90.055	Sarcophilus_harrisii
ENSIPUG00000020981	RBPMS	100	88.525	ENSSFOG00015010476	rbpms2b	100	88.525	Scleropages_formosus
ENSIPUG00000020981	RBPMS	99	90.055	ENSSFOG00015022055	rbpms2	100	91.457	Scleropages_formosus
ENSIPUG00000020981	RBPMS	99	88.398	ENSSMAG00000009743	rbpms2b	71	83.099	Scophthalmus_maximus
ENSIPUG00000020981	RBPMS	99	87.634	ENSSLDG00000023070	rbpms2b	73	87.745	Seriola_lalandi_dorsalis
ENSIPUG00000020981	RBPMS	99	87.293	ENSSPUG00000006378	RBPMS2	97	86.154	Sphenodon_punctatus
ENSIPUG00000020981	RBPMS	99	89.503	ENSSPAG00000001979	rbpms2b	100	89.950	Stegastes_partitus
ENSIPUG00000020981	RBPMS	99	80.769	ENSSSCG00000004549	RBPMS2	95	77.833	Sus_scrofa
ENSIPUG00000020981	RBPMS	78	93.662	ENSTGUG00000004722	RBPMS2	100	92.547	Taeniopygia_guttata
ENSIPUG00000020981	RBPMS	99	88.950	ENSTRUG00000025375	rbpms2b	74	89.950	Takifugu_rubripes
ENSIPUG00000020981	RBPMS	99	80.110	ENSTTRG00000011840	RBPMS2	93	81.579	Tursiops_truncatus
ENSIPUG00000020981	RBPMS	100	80.874	ENSUMAG00000012614	RBPMS2	85	84.066	Ursus_maritimus
ENSIPUG00000020981	RBPMS	100	80.328	ENSVVUG00000013801	RBPMS2	91	83.243	Vulpes_vulpes
ENSIPUG00000020981	RBPMS	99	89.503	ENSXCOG00000000567	rbpms2b	96	89.840	Xiphophorus_couchianus
ENSIPUG00000020981	RBPMS	99	89.503	ENSXMAG00000001210	rbpms2b	100	90.452	Xiphophorus_maculatus