EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021000 (Gene tree)
Gene ID: 108273288
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10855 bases
Position: chr12:9675164-9686018
Accession: 108273288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031157	ResIII	PF04851.15	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032405	-	3108	XM_017482446	ENSIPUP00000031157	780 (aa)	XP_017337935	A0A2D0S6T9

Gene Model

Click here to download ENSIPUG00000021000's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03022	Basal transcription factors	KEGG
ipu03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021000	ercc3	100	87.898	ENSG00000163161	ERCC3	99	95.652	Homo_sapiens
ENSIPUG00000021000	ercc3	100	91.954	ENSAPOG00000014383	ercc3	100	91.954	Acanthochromis_polyacanthus
ENSIPUG00000021000	ercc3	100	87.389	ENSAMEG00000016840	ERCC3	100	87.516	Ailuropoda_melanoleuca
ENSIPUG00000021000	ercc3	99	91.742	ENSACIG00000000126	ercc3	100	91.742	Amphilophus_citrinellus
ENSIPUG00000021000	ercc3	100	91.954	ENSAOCG00000009396	ercc3	100	91.954	Amphiprion_ocellaris
ENSIPUG00000021000	ercc3	100	91.954	ENSAPEG00000023077	ercc3	100	91.954	Amphiprion_percula
ENSIPUG00000021000	ercc3	100	91.826	ENSATEG00000014860	ercc3	100	92.209	Anabas_testudineus
ENSIPUG00000021000	ercc3	91	88.202	ENSAPLG00000012068	ERCC3	98	88.202	Anas_platyrhynchos
ENSIPUG00000021000	ercc3	92	88.766	ENSACAG00000009919	ERCC3	100	88.766	Anolis_carolinensis
ENSIPUG00000021000	ercc3	100	88.025	ENSANAG00000031091	ERCC3	100	88.025	Aotus_nancymaae
ENSIPUG00000021000	ercc3	100	92.209	ENSACLG00000022508	ercc3	100	92.209	Astatotilapia_calliptera
ENSIPUG00000021000	ercc3	100	93.223	ENSAMXG00000036947	ercc3	100	93.223	Astyanax_mexicanus
ENSIPUG00000021000	ercc3	100	87.134	ENSBTAG00000020777	ERCC3	100	87.134	Bos_taurus
ENSIPUG00000021000	ercc3	99	61.577	WBGene00013441	xpb-1	99	61.654	Caenorhabditis_elegans
ENSIPUG00000021000	ercc3	100	87.771	ENSCJAG00000010416	ERCC3	100	87.771	Callithrix_jacchus
ENSIPUG00000021000	ercc3	98	88.281	ENSCAFG00000004497	ERCC3	100	87.596	Canis_familiaris
ENSIPUG00000021000	ercc3	98	88.281	ENSCAFG00020003495	ERCC3	100	87.596	Canis_lupus_dingo
ENSIPUG00000021000	ercc3	100	87.389	ENSCHIG00000014551	ERCC3	100	87.389	Capra_hircus
ENSIPUG00000021000	ercc3	99	86.985	ENSTSYG00000004137	ERCC3	99	86.985	Carlito_syrichta
ENSIPUG00000021000	ercc3	78	80.424	ENSCAPG00000017027	ERCC3	93	80.424	Cavia_aperea
ENSIPUG00000021000	ercc3	100	85.860	ENSCPOG00000002144	ERCC3	100	86.115	Cavia_porcellus
ENSIPUG00000021000	ercc3	100	87.898	ENSCCAG00000024421	ERCC3	100	87.898	Cebus_capucinus
ENSIPUG00000021000	ercc3	100	87.898	ENSCATG00000032313	ERCC3	100	87.898	Cercocebus_atys
ENSIPUG00000021000	ercc3	100	86.879	ENSCLAG00000002965	ERCC3	96	87.134	Chinchilla_lanigera
ENSIPUG00000021000	ercc3	100	87.771	ENSCSAG00000016827	ERCC3	100	87.771	Chlorocebus_sabaeus
ENSIPUG00000021000	ercc3	83	93.567	ENSCHOG00000007414	ERCC3	83	93.567	Choloepus_hoffmanni
ENSIPUG00000021000	ercc3	92	89.182	ENSCPBG00000013638	ERCC3	100	89.182	Chrysemys_picta_bellii
ENSIPUG00000021000	ercc3	96	71.615	ENSCING00000002867	ercc3	96	71.615	Ciona_intestinalis
ENSIPUG00000021000	ercc3	100	88.025	ENSCANG00000007094	ERCC3	100	88.025	Colobus_angolensis_palliatus
ENSIPUG00000021000	ercc3	100	86.879	ENSCGRG00001009426	Ercc3	100	86.879	Cricetulus_griseus_chok1gshd
ENSIPUG00000021000	ercc3	97	86.597	ENSCGRG00000015547	Ercc3	100	86.597	Cricetulus_griseus_crigri
ENSIPUG00000021000	ercc3	100	89.427	ENSCSEG00000016479	ercc3	100	89.427	Cynoglossus_semilaevis
ENSIPUG00000021000	ercc3	98	91.525	ENSCVAG00000015177	ercc3	100	90.932	Cyprinodon_variegatus
ENSIPUG00000021000	ercc3	98	93.603	ENSDARG00000002402	ercc3	100	92.839	Danio_rerio
ENSIPUG00000021000	ercc3	57	93.213	ENSDNOG00000035027	ERCC3	95	93.213	Dasypus_novemcinctus
ENSIPUG00000021000	ercc3	97	89.036	ENSDORG00000004671	Ercc3	100	87.724	Dipodomys_ordii
ENSIPUG00000021000	ercc3	99	67.045	FBgn0001179	hay	98	67.337	Drosophila_melanogaster
ENSIPUG00000021000	ercc3	90	89.490	ENSETEG00000019887	ERCC3	90	89.490	Echinops_telfairi
ENSIPUG00000021000	ercc3	100	79.319	ENSEBUG00000009773	ercc3	100	79.371	Eptatretus_burgeri
ENSIPUG00000021000	ercc3	100	85.342	ENSEASG00005022466	ERCC3	93	89.628	Equus_asinus_asinus
ENSIPUG00000021000	ercc3	100	87.389	ENSECAG00000006589	ERCC3	100	87.389	Equus_caballus
ENSIPUG00000021000	ercc3	93	88.115	ENSEEUG00000001057	ERCC3	99	88.115	Erinaceus_europaeus
ENSIPUG00000021000	ercc3	100	90.446	ENSELUG00000000089	ercc3	99	90.446	Esox_lucius
ENSIPUG00000021000	ercc3	100	87.134	ENSFCAG00000006989	ERCC3	100	87.261	Felis_catus
ENSIPUG00000021000	ercc3	99	85.586	ENSFALG00000003936	ERCC3	99	85.586	Ficedula_albicollis
ENSIPUG00000021000	ercc3	100	86.369	ENSFDAG00000011924	ERCC3	100	86.624	Fukomys_damarensis
ENSIPUG00000021000	ercc3	100	91.060	ENSFHEG00000005185	ercc3	100	91.060	Fundulus_heteroclitus
ENSIPUG00000021000	ercc3	100	88.107	ENSGMOG00000018032	ercc3	99	88.107	Gadus_morhua
ENSIPUG00000021000	ercc3	98	87.109	ENSGALG00000011515	ERCC3	100	86.445	Gallus_gallus
ENSIPUG00000021000	ercc3	100	91.443	ENSGAFG00000011936	ercc3	100	91.443	Gambusia_affinis
ENSIPUG00000021000	ercc3	100	90.840	ENSGACG00000015218	ercc3	100	90.840	Gasterosteus_aculeatus
ENSIPUG00000021000	ercc3	92	88.904	ENSGAGG00000018579	ERCC3	100	88.904	Gopherus_agassizii
ENSIPUG00000021000	ercc3	100	87.898	ENSGGOG00000015255	ERCC3	100	87.898	Gorilla_gorilla
ENSIPUG00000021000	ercc3	100	92.209	ENSHBUG00000003818	ercc3	100	92.209	Haplochromis_burtoni
ENSIPUG00000021000	ercc3	100	86.752	ENSHGLG00000011014	ERCC3	100	87.006	Heterocephalus_glaber_female
ENSIPUG00000021000	ercc3	100	86.752	ENSHGLG00100013806	ERCC3	100	87.006	Heterocephalus_glaber_male
ENSIPUG00000021000	ercc3	100	90.294	ENSHCOG00000016924	ercc3	100	90.434	Hippocampus_comes
ENSIPUG00000021000	ercc3	100	87.006	ENSSTOG00000011001	ERCC3	100	87.261	Ictidomys_tridecemlineatus
ENSIPUG00000021000	ercc3	91	87.853	ENSJJAG00000001117	Ercc3	100	87.853	Jaculus_jaculus
ENSIPUG00000021000	ercc3	100	90.549	ENSKMAG00000021764	ercc3	100	90.549	Kryptolebias_marmoratus
ENSIPUG00000021000	ercc3	100	91.188	ENSLBEG00000000468	ercc3	100	91.188	Labrus_bergylta
ENSIPUG00000021000	ercc3	98	83.462	ENSLACG00000014815	ERCC3	100	82.538	Latimeria_chalumnae
ENSIPUG00000021000	ercc3	90	88.260	ENSLOCG00000010907	ercc3	87	88.260	Lepisosteus_oculatus
ENSIPUG00000021000	ercc3	100	86.879	ENSLAFG00000014866	ERCC3	100	87.006	Loxodonta_africana
ENSIPUG00000021000	ercc3	100	87.898	ENSMFAG00000003370	ERCC3	100	87.898	Macaca_fascicularis
ENSIPUG00000021000	ercc3	100	84.151	ENSMNEG00000004215	ERCC3	100	84.151	Macaca_nemestrina
ENSIPUG00000021000	ercc3	100	87.898	ENSMLEG00000042061	ERCC3	100	87.898	Mandrillus_leucophaeus
ENSIPUG00000021000	ercc3	100	90.793	ENSMAMG00000004505	ercc3	99	90.793	Mastacembelus_armatus
ENSIPUG00000021000	ercc3	100	92.209	ENSMZEG00005004854	ercc3	100	92.209	Maylandia_zebra
ENSIPUG00000021000	ercc3	91	88.402	ENSMGAG00000011706	ERCC3	100	88.402	Meleagris_gallopavo
ENSIPUG00000021000	ercc3	97	89.036	ENSMAUG00000004515	Ercc3	100	86.896	Mesocricetus_auratus
ENSIPUG00000021000	ercc3	100	87.134	ENSMICG00000009578	ERCC3	100	87.389	Microcebus_murinus
ENSIPUG00000021000	ercc3	100	86.497	ENSMOCG00000021767	Ercc3	100	86.497	Microtus_ochrogaster
ENSIPUG00000021000	ercc3	99	90.310	ENSMMOG00000018174	ercc3	99	90.310	Mola_mola
ENSIPUG00000021000	ercc3	98	88.672	ENSMODG00000018695	ERCC3	100	87.516	Monodelphis_domestica
ENSIPUG00000021000	ercc3	100	90.537	ENSMALG00000014944	ercc3	100	90.537	Monopterus_albus
ENSIPUG00000021000	ercc3	100	87.134	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.134	Mus_caroli
ENSIPUG00000021000	ercc3	100	87.277	ENSMUSG00000024382	Ercc3	100	87.277	Mus_musculus
ENSIPUG00000021000	ercc3	100	87.134	MGP_PahariEiJ_G0018809	Ercc3	100	87.389	Mus_pahari
ENSIPUG00000021000	ercc3	100	87.150	MGP_SPRETEiJ_G0022987	Ercc3	100	87.150	Mus_spretus
ENSIPUG00000021000	ercc3	100	87.389	ENSMPUG00000012021	ERCC3	100	87.516	Mustela_putorius_furo
ENSIPUG00000021000	ercc3	93	85.048	ENSMLUG00000007429	ERCC3	99	85.048	Myotis_lucifugus
ENSIPUG00000021000	ercc3	97	85.976	ENSNGAG00000019598	Ercc3	99	88.467	Nannospalax_galili
ENSIPUG00000021000	ercc3	100	92.209	ENSNBRG00000019074	ercc3	100	92.209	Neolamprologus_brichardi
ENSIPUG00000021000	ercc3	92	87.222	ENSNLEG00000015665	ERCC3	97	87.222	Nomascus_leucogenys
ENSIPUG00000021000	ercc3	100	85.350	ENSOPRG00000004553	ERCC3	100	85.350	Ochotona_princeps
ENSIPUG00000021000	ercc3	100	86.879	ENSODEG00000005795	ERCC3	100	87.134	Octodon_degus
ENSIPUG00000021000	ercc3	100	92.082	ENSONIG00000003255	ercc3	100	92.082	Oreochromis_niloticus
ENSIPUG00000021000	ercc3	100	87.516	ENSOCUG00000002248	ERCC3	100	87.771	Oryctolagus_cuniculus
ENSIPUG00000021000	ercc3	100	90.421	ENSORLG00000004393	ercc3	100	90.421	Oryzias_latipes
ENSIPUG00000021000	ercc3	100	90.051	ENSORLG00020017718	ercc3	99	91.328	Oryzias_latipes_hni
ENSIPUG00000021000	ercc3	100	90.166	ENSORLG00015015695	ercc3	100	90.166	Oryzias_latipes_hsok
ENSIPUG00000021000	ercc3	100	90.421	ENSOMEG00000015374	ercc3	100	90.421	Oryzias_melastigma
ENSIPUG00000021000	ercc3	100	86.912	ENSOGAG00000009103	ERCC3	100	87.166	Otolemur_garnettii
ENSIPUG00000021000	ercc3	100	87.389	ENSOARG00000016147	ERCC3	100	87.389	Ovis_aries
ENSIPUG00000021000	ercc3	100	87.898	ENSPPAG00000036166	ERCC3	100	87.898	Pan_paniscus
ENSIPUG00000021000	ercc3	100	87.261	ENSPPRG00000001305	ERCC3	100	87.389	Panthera_pardus
ENSIPUG00000021000	ercc3	92	89.182	ENSPTIG00000016969	ERCC3	100	89.182	Panthera_tigris_altaica
ENSIPUG00000021000	ercc3	100	87.898	ENSPTRG00000046940	ERCC3	100	87.898	Pan_troglodytes
ENSIPUG00000021000	ercc3	100	87.898	ENSPANG00000007699	ERCC3	100	87.898	Papio_anubis
ENSIPUG00000021000	ercc3	99	91.902	ENSPKIG00000001319	ercc3	99	93.236	Paramormyrops_kingsleyae
ENSIPUG00000021000	ercc3	92	89.043	ENSPSIG00000014682	ERCC3	100	89.043	Pelodiscus_sinensis
ENSIPUG00000021000	ercc3	97	91.656	ENSPMGG00000017885	ercc3	99	90.294	Periophthalmus_magnuspinnatus
ENSIPUG00000021000	ercc3	100	87.389	ENSPEMG00000013733	Ercc3	100	87.389	Peromyscus_maniculatus_bairdii
ENSIPUG00000021000	ercc3	90	78.571	ENSPMAG00000005081	ercc3	99	78.571	Petromyzon_marinus
ENSIPUG00000021000	ercc3	99	88.273	ENSPCIG00000011821	ERCC3	100	87.771	Phascolarctos_cinereus
ENSIPUG00000021000	ercc3	98	92.047	ENSPFOG00000015604	ercc3	100	91.549	Poecilia_formosa
ENSIPUG00000021000	ercc3	98	89.337	ENSPLAG00000022245	ercc3	100	92.788	Poecilia_latipinna
ENSIPUG00000021000	ercc3	98	92.047	ENSPMEG00000016987	ercc3	100	91.549	Poecilia_mexicana
ENSIPUG00000021000	ercc3	100	91.443	ENSPREG00000020921	ercc3	100	91.443	Poecilia_reticulata
ENSIPUG00000021000	ercc3	100	87.150	ENSPPYG00000012769	ERCC3	100	87.150	Pongo_abelii
ENSIPUG00000021000	ercc3	100	87.006	ENSPCOG00000024903	ERCC3	100	87.006	Propithecus_coquereli
ENSIPUG00000021000	ercc3	90	89.535	ENSPVAG00000013774	ERCC3	90	89.535	Pteropus_vampyrus
ENSIPUG00000021000	ercc3	100	92.209	ENSPNYG00000001208	ercc3	100	92.209	Pundamilia_nyererei
ENSIPUG00000021000	ercc3	100	93.734	ENSPNAG00000005748	ercc3	100	93.734	Pygocentrus_nattereri
ENSIPUG00000021000	ercc3	100	87.134	ENSRNOG00000013180	Ercc3	100	87.134	Rattus_norvegicus
ENSIPUG00000021000	ercc3	100	87.898	ENSRBIG00000027692	ERCC3	100	87.898	Rhinopithecus_bieti
ENSIPUG00000021000	ercc3	100	87.898	ENSRROG00000040673	ERCC3	100	87.898	Rhinopithecus_roxellana
ENSIPUG00000021000	ercc3	92	55.767	YIL143C	SSL2	85	55.767	Saccharomyces_cerevisiae
ENSIPUG00000021000	ercc3	100	87.516	ENSSBOG00000023079	ERCC3	100	87.516	Saimiri_boliviensis_boliviensis
ENSIPUG00000021000	ercc3	98	88.672	ENSSHAG00000007423	ERCC3	100	87.516	Sarcophilus_harrisii
ENSIPUG00000021000	ercc3	98	91.503	ENSSFOG00015012753	ercc3	99	90.488	Scleropages_formosus
ENSIPUG00000021000	ercc3	100	89.822	ENSSMAG00000011915	ercc3	100	89.822	Scophthalmus_maximus
ENSIPUG00000021000	ercc3	100	91.327	ENSSDUG00000021181	ercc3	100	91.327	Seriola_dumerili
ENSIPUG00000021000	ercc3	100	91.582	ENSSLDG00000008744	ercc3	98	91.582	Seriola_lalandi_dorsalis
ENSIPUG00000021000	ercc3	55	79.493	ENSSARG00000000751	-	85	79.493	Sorex_araneus
ENSIPUG00000021000	ercc3	91	87.553	ENSSPUG00000015183	ERCC3	91	87.553	Sphenodon_punctatus
ENSIPUG00000021000	ercc3	100	91.826	ENSSPAG00000004748	ercc3	100	91.826	Stegastes_partitus
ENSIPUG00000021000	ercc3	100	87.516	ENSSSCG00000015721	ERCC3	100	89.331	Sus_scrofa
ENSIPUG00000021000	ercc3	99	87.371	ENSTGUG00000004920	-	100	87.500	Taeniopygia_guttata
ENSIPUG00000021000	ercc3	100	89.642	ENSTRUG00000017185	ercc3	100	89.514	Takifugu_rubripes
ENSIPUG00000021000	ercc3	98	87.811	ENSTNIG00000005457	ercc3	99	88.594	Tetraodon_nigroviridis
ENSIPUG00000021000	ercc3	80	88.694	ENSTBEG00000009381	ERCC3	81	88.694	Tupaia_belangeri
ENSIPUG00000021000	ercc3	68	93.585	ENSUAMG00000009589	-	100	93.585	Ursus_americanus
ENSIPUG00000021000	ercc3	100	87.643	ENSUMAG00000008361	ERCC3	100	87.771	Ursus_maritimus
ENSIPUG00000021000	ercc3	92	89.182	ENSVVUG00000010431	ERCC3	100	89.182	Vulpes_vulpes
ENSIPUG00000021000	ercc3	100	85.152	ENSXETG00000033646	ercc3	100	85.152	Xenopus_tropicalis
ENSIPUG00000021000	ercc3	99	90.944	ENSXCOG00000001791	ercc3	99	90.944	Xiphophorus_couchianus
ENSIPUG00000021000	ercc3	100	91.443	ENSXMAG00000003641	ercc3	100	91.443	Xiphophorus_maculatus