EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021006 (Gene tree)
Gene ID: 108270440
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4633 bases
Position: chr9:10642395-10647027
Accession: 108270440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031163	PseudoU_synth_2	PF00849.22	2.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032411	-	1798	XM_017477143	ENSIPUP00000031163	588 (aa)	XP_017332632	A0A2D0RQ46

Gene Model

Click here to download ENSIPUG00000021006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021006	rpusd2	79	60.560	ENSG00000166133	RPUSD2	82	60.560	Homo_sapiens
ENSIPUG00000021006	rpusd2	81	68.663	ENSAPOG00000000817	rpusd2	85	68.862	Acanthochromis_polyacanthus
ENSIPUG00000021006	rpusd2	79	58.887	ENSAMEG00000016996	RPUSD2	82	58.887	Ailuropoda_melanoleuca
ENSIPUG00000021006	rpusd2	82	70.041	ENSACIG00000024029	rpusd2	94	70.248	Amphilophus_citrinellus
ENSIPUG00000021006	rpusd2	81	68.228	ENSAOCG00000015237	rpusd2	85	68.432	Amphiprion_ocellaris
ENSIPUG00000021006	rpusd2	81	67.617	ENSAPEG00000021763	rpusd2	85	67.821	Amphiprion_percula
ENSIPUG00000021006	rpusd2	81	68.737	ENSATEG00000015242	rpusd2	84	69.539	Anabas_testudineus
ENSIPUG00000021006	rpusd2	74	62.903	ENSAPLG00000004723	RPUSD2	99	62.673	Anas_platyrhynchos
ENSIPUG00000021006	rpusd2	76	61.745	ENSACAG00000013893	RPUSD2	97	58.787	Anolis_carolinensis
ENSIPUG00000021006	rpusd2	79	60.043	ENSANAG00000009691	RPUSD2	82	60.043	Aotus_nancymaae
ENSIPUG00000021006	rpusd2	81	68.367	ENSACLG00000019531	rpusd2	85	68.571	Astatotilapia_calliptera
ENSIPUG00000021006	rpusd2	78	73.361	ENSAMXG00000013376	rpusd2	88	71.053	Astyanax_mexicanus
ENSIPUG00000021006	rpusd2	78	59.870	ENSBTAG00000003193	RPUSD2	80	59.870	Bos_taurus
ENSIPUG00000021006	rpusd2	70	35.507	WBGene00019498	K07E8.7	97	35.507	Caenorhabditis_elegans
ENSIPUG00000021006	rpusd2	87	55.642	ENSCJAG00000020841	RPUSD2	88	55.642	Callithrix_jacchus
ENSIPUG00000021006	rpusd2	79	58.672	ENSCAFG00000009165	RPUSD2	81	58.672	Canis_familiaris
ENSIPUG00000021006	rpusd2	79	58.672	ENSCAFG00020005849	RPUSD2	81	58.672	Canis_lupus_dingo
ENSIPUG00000021006	rpusd2	78	59.653	ENSCHIG00000006152	RPUSD2	80	59.653	Capra_hircus
ENSIPUG00000021006	rpusd2	79	59.267	ENSTSYG00000012844	RPUSD2	82	59.267	Carlito_syrichta
ENSIPUG00000021006	rpusd2	51	59.396	ENSCAPG00000006895	-	99	59.396	Cavia_aperea
ENSIPUG00000021006	rpusd2	79	60.691	ENSCPOG00000013201	RPUSD2	82	60.691	Cavia_porcellus
ENSIPUG00000021006	rpusd2	79	60.259	ENSCCAG00000024378	RPUSD2	82	60.259	Cebus_capucinus
ENSIPUG00000021006	rpusd2	79	60.475	ENSCATG00000043734	RPUSD2	82	60.475	Cercocebus_atys
ENSIPUG00000021006	rpusd2	79	60.475	ENSCLAG00000011862	RPUSD2	82	60.475	Chinchilla_lanigera
ENSIPUG00000021006	rpusd2	79	60.129	ENSCSAG00000007538	RPUSD2	87	60.259	Chlorocebus_sabaeus
ENSIPUG00000021006	rpusd2	61	56.863	ENSCHOG00000004834	RPUSD2	63	56.863	Choloepus_hoffmanni
ENSIPUG00000021006	rpusd2	78	60.373	ENSCPBG00000013419	RPUSD2	90	60.373	Chrysemys_picta_bellii
ENSIPUG00000021006	rpusd2	79	60.691	ENSCANG00000003659	RPUSD2	82	60.691	Colobus_angolensis_palliatus
ENSIPUG00000021006	rpusd2	86	56.151	ENSCGRG00001009839	Rpusd2	85	56.151	Cricetulus_griseus_chok1gshd
ENSIPUG00000021006	rpusd2	86	56.151	ENSCGRG00000012348	Rpusd2	87	56.151	Cricetulus_griseus_crigri
ENSIPUG00000021006	rpusd2	81	66.944	ENSCSEG00000001953	rpusd2	82	66.944	Cynoglossus_semilaevis
ENSIPUG00000021006	rpusd2	83	68.507	ENSCVAG00000010848	rpusd2	88	68.952	Cyprinodon_variegatus
ENSIPUG00000021006	rpusd2	85	71.373	ENSDARG00000060992	rpusd2	85	71.765	Danio_rerio
ENSIPUG00000021006	rpusd2	79	56.900	ENSDNOG00000047745	RPUSD2	82	56.900	Dasypus_novemcinctus
ENSIPUG00000021006	rpusd2	76	61.607	ENSDORG00000009092	Rpusd2	100	61.607	Dipodomys_ordii
ENSIPUG00000021006	rpusd2	84	44.828	FBgn0032256	RluA-2	86	44.828	Drosophila_melanogaster
ENSIPUG00000021006	rpusd2	81	46.032	FBgn0051719	RluA-1	66	46.032	Drosophila_melanogaster
ENSIPUG00000021006	rpusd2	79	57.974	ENSETEG00000008581	RPUSD2	84	57.974	Echinops_telfairi
ENSIPUG00000021006	rpusd2	73	35.147	ENSEBUG00000012149	rpusd2	83	35.147	Eptatretus_burgeri
ENSIPUG00000021006	rpusd2	79	60.043	ENSEASG00005016463	RPUSD2	80	60.129	Equus_asinus_asinus
ENSIPUG00000021006	rpusd2	79	60.129	ENSECAG00000024178	RPUSD2	80	60.129	Equus_caballus
ENSIPUG00000021006	rpusd2	78	52.278	ENSEEUG00000005132	RPUSD2	84	52.278	Erinaceus_europaeus
ENSIPUG00000021006	rpusd2	87	65.774	ENSELUG00000016786	rpusd2	95	65.774	Esox_lucius
ENSIPUG00000021006	rpusd2	79	58.672	ENSFCAG00000040796	RPUSD2	81	58.672	Felis_catus
ENSIPUG00000021006	rpusd2	75	62.192	ENSFALG00000001122	RPUSD2	96	62.363	Ficedula_albicollis
ENSIPUG00000021006	rpusd2	79	59.827	ENSFDAG00000003070	RPUSD2	87	59.827	Fukomys_damarensis
ENSIPUG00000021006	rpusd2	81	69.937	ENSFHEG00000007518	rpusd2	86	69.937	Fundulus_heteroclitus
ENSIPUG00000021006	rpusd2	82	65.918	ENSGMOG00000011014	rpusd2	99	66.735	Gadus_morhua
ENSIPUG00000021006	rpusd2	78	63.034	ENSGALG00000041216	RPUSD2	94	63.034	Gallus_gallus
ENSIPUG00000021006	rpusd2	81	71.190	ENSGAFG00000003390	rpusd2	83	71.190	Gambusia_affinis
ENSIPUG00000021006	rpusd2	81	68.675	ENSGACG00000008656	rpusd2	94	68.675	Gasterosteus_aculeatus
ENSIPUG00000021006	rpusd2	80	61.915	ENSGAGG00000013098	RPUSD2	88	61.915	Gopherus_agassizii
ENSIPUG00000021006	rpusd2	79	60.129	ENSGGOG00000006684	RPUSD2	82	60.129	Gorilla_gorilla
ENSIPUG00000021006	rpusd2	84	66.139	ENSHBUG00000023777	rpusd2	85	68.571	Haplochromis_burtoni
ENSIPUG00000021006	rpusd2	79	59.611	ENSHGLG00000012765	RPUSD2	82	59.611	Heterocephalus_glaber_female
ENSIPUG00000021006	rpusd2	79	59.611	ENSHGLG00100006653	RPUSD2	82	59.611	Heterocephalus_glaber_male
ENSIPUG00000021006	rpusd2	84	69.444	ENSHCOG00000015587	rpusd2	85	69.444	Hippocampus_comes
ENSIPUG00000021006	rpusd2	79	59.827	ENSSTOG00000025619	RPUSD2	81	59.827	Ictidomys_tridecemlineatus
ENSIPUG00000021006	rpusd2	77	61.454	ENSJJAG00000023160	Rpusd2	84	61.159	Jaculus_jaculus
ENSIPUG00000021006	rpusd2	84	66.858	ENSKMAG00000006618	rpusd2	89	65.922	Kryptolebias_marmoratus
ENSIPUG00000021006	rpusd2	84	66.145	ENSLBEG00000021571	rpusd2	87	67.057	Labrus_bergylta
ENSIPUG00000021006	rpusd2	76	61.739	ENSLACG00000017338	RPUSD2	100	61.739	Latimeria_chalumnae
ENSIPUG00000021006	rpusd2	86	64.554	ENSLOCG00000014755	rpusd2	99	65.878	Lepisosteus_oculatus
ENSIPUG00000021006	rpusd2	78	60.217	ENSLAFG00000015588	RPUSD2	84	60.217	Loxodonta_africana
ENSIPUG00000021006	rpusd2	79	60.475	ENSMFAG00000045062	RPUSD2	82	60.345	Macaca_fascicularis
ENSIPUG00000021006	rpusd2	79	60.345	ENSMMUG00000001483	RPUSD2	82	60.345	Macaca_mulatta
ENSIPUG00000021006	rpusd2	92	48.014	ENSMNEG00000041429	RPUSD2	92	48.014	Macaca_nemestrina
ENSIPUG00000021006	rpusd2	61	57.865	ENSMLEG00000036551	RPUSD2	81	57.703	Mandrillus_leucophaeus
ENSIPUG00000021006	rpusd2	87	62.888	ENSMAMG00000001077	rpusd2	89	63.071	Mastacembelus_armatus
ENSIPUG00000021006	rpusd2	81	68.367	ENSMZEG00005006947	rpusd2	94	68.571	Maylandia_zebra
ENSIPUG00000021006	rpusd2	78	63.478	ENSMGAG00000003058	RPUSD2	97	63.478	Meleagris_gallopavo
ENSIPUG00000021006	rpusd2	86	56.548	ENSMAUG00000020467	Rpusd2	87	56.548	Mesocricetus_auratus
ENSIPUG00000021006	rpusd2	80	58.263	ENSMICG00000028637	RPUSD2	84	58.263	Microcebus_murinus
ENSIPUG00000021006	rpusd2	79	59.914	ENSMOCG00000020061	Rpusd2	80	59.914	Microtus_ochrogaster
ENSIPUG00000021006	rpusd2	81	70.902	ENSMMOG00000012020	rpusd2	93	66.667	Mola_mola
ENSIPUG00000021006	rpusd2	79	59.395	ENSMODG00000000300	RPUSD2	82	59.395	Monodelphis_domestica
ENSIPUG00000021006	rpusd2	86	64.045	ENSMALG00000010024	rpusd2	87	64.794	Monopterus_albus
ENSIPUG00000021006	rpusd2	86	56.151	MGP_CAROLIEiJ_G0024130	Rpusd2	87	56.151	Mus_caroli
ENSIPUG00000021006	rpusd2	86	56.436	ENSMUSG00000027324	Rpusd2	87	56.436	Mus_musculus
ENSIPUG00000021006	rpusd2	86	58.350	MGP_PahariEiJ_G0025573	Rpusd2	87	58.350	Mus_pahari
ENSIPUG00000021006	rpusd2	86	56.040	MGP_SPRETEiJ_G0025046	Rpusd2	88	56.040	Mus_spretus
ENSIPUG00000021006	rpusd2	85	56.800	ENSMPUG00000008517	RPUSD2	85	56.800	Mustela_putorius_furo
ENSIPUG00000021006	rpusd2	79	60.128	ENSMLUG00000007971	RPUSD2	88	60.128	Myotis_lucifugus
ENSIPUG00000021006	rpusd2	86	57.822	ENSNGAG00000014126	Rpusd2	88	57.822	Nannospalax_galili
ENSIPUG00000021006	rpusd2	84	68.081	ENSNBRG00000010070	rpusd2	84	70.625	Neolamprologus_brichardi
ENSIPUG00000021006	rpusd2	79	59.914	ENSNLEG00000035735	RPUSD2	82	59.914	Nomascus_leucogenys
ENSIPUG00000021006	rpusd2	79	60.043	ENSMEUG00000008500	RPUSD2	85	60.043	Notamacropus_eugenii
ENSIPUG00000021006	rpusd2	84	56.707	ENSOPRG00000014177	-	87	56.707	Ochotona_princeps
ENSIPUG00000021006	rpusd2	79	59.611	ENSODEG00000017193	RPUSD2	83	59.611	Octodon_degus
ENSIPUG00000021006	rpusd2	84	68.612	ENSONIG00000020102	rpusd2	96	68.813	Oreochromis_niloticus
ENSIPUG00000021006	rpusd2	79	59.188	ENSOCUG00000015745	RPUSD2	79	59.188	Oryctolagus_cuniculus
ENSIPUG00000021006	rpusd2	87	67.899	ENSORLG00000015516	rpusd2	91	67.899	Oryzias_latipes
ENSIPUG00000021006	rpusd2	83	69.980	ENSORLG00020010533	rpusd2	87	69.980	Oryzias_latipes_hni
ENSIPUG00000021006	rpusd2	84	68.410	ENSORLG00015009206	rpusd2	87	68.410	Oryzias_latipes_hsok
ENSIPUG00000021006	rpusd2	93	62.523	ENSOMEG00000007355	rpusd2	89	63.752	Oryzias_melastigma
ENSIPUG00000021006	rpusd2	79	59.179	ENSOGAG00000004867	RPUSD2	85	59.179	Otolemur_garnettii
ENSIPUG00000021006	rpusd2	76	60.444	ENSOARG00000020235	RPUSD2	84	58.526	Ovis_aries
ENSIPUG00000021006	rpusd2	79	60.345	ENSPPAG00000032874	RPUSD2	82	60.345	Pan_paniscus
ENSIPUG00000021006	rpusd2	79	58.672	ENSPPRG00000010446	RPUSD2	82	58.672	Panthera_pardus
ENSIPUG00000021006	rpusd2	79	58.672	ENSPTIG00000013316	RPUSD2	82	58.672	Panthera_tigris_altaica
ENSIPUG00000021006	rpusd2	79	60.560	ENSPTRG00000006924	RPUSD2	82	60.560	Pan_troglodytes
ENSIPUG00000021006	rpusd2	79	60.345	ENSPANG00000019339	RPUSD2	82	60.345	Papio_anubis
ENSIPUG00000021006	rpusd2	88	61.063	ENSPKIG00000023017	rpusd2	87	62.093	Paramormyrops_kingsleyae
ENSIPUG00000021006	rpusd2	60	62.323	ENSPSIG00000012680	RPUSD2	99	62.323	Pelodiscus_sinensis
ENSIPUG00000021006	rpusd2	85	65.469	ENSPMGG00000018165	rpusd2	86	65.669	Periophthalmus_magnuspinnatus
ENSIPUG00000021006	rpusd2	78	60.738	ENSPEMG00000012878	Rpusd2	82	60.738	Peromyscus_maniculatus_bairdii
ENSIPUG00000021006	rpusd2	79	58.710	ENSPCIG00000023199	RPUSD2	81	58.710	Phascolarctos_cinereus
ENSIPUG00000021006	rpusd2	81	70.772	ENSPFOG00000006829	rpusd2	84	70.772	Poecilia_formosa
ENSIPUG00000021006	rpusd2	81	70.772	ENSPLAG00000022914	rpusd2	95	70.772	Poecilia_latipinna
ENSIPUG00000021006	rpusd2	81	70.564	ENSPMEG00000009835	rpusd2	95	70.564	Poecilia_mexicana
ENSIPUG00000021006	rpusd2	81	70.954	ENSPREG00000016441	rpusd2	81	70.954	Poecilia_reticulata
ENSIPUG00000021006	rpusd2	79	60.129	ENSPPYG00000006355	RPUSD2	82	60.129	Pongo_abelii
ENSIPUG00000021006	rpusd2	81	57.829	ENSPCOG00000028019	RPUSD2	86	57.829	Propithecus_coquereli
ENSIPUG00000021006	rpusd2	79	59.149	ENSPVAG00000001837	RPUSD2	82	59.149	Pteropus_vampyrus
ENSIPUG00000021006	rpusd2	81	70.833	ENSPNYG00000021507	rpusd2	92	71.042	Pundamilia_nyererei
ENSIPUG00000021006	rpusd2	86	56.436	ENSRNOG00000046797	Rpusd2	87	56.436	Rattus_norvegicus
ENSIPUG00000021006	rpusd2	86	56.436	ENSRNOG00000010528	LOC100911166	87	56.436	Rattus_norvegicus
ENSIPUG00000021006	rpusd2	79	60.345	ENSRBIG00000030813	RPUSD2	82	60.345	Rhinopithecus_bieti
ENSIPUG00000021006	rpusd2	79	60.129	ENSRROG00000026664	RPUSD2	82	60.129	Rhinopithecus_roxellana
ENSIPUG00000021006	rpusd2	50	44.966	YOL066C	RIB2	50	44.966	Saccharomyces_cerevisiae
ENSIPUG00000021006	rpusd2	79	59.013	ENSSBOG00000035031	RPUSD2	82	59.013	Saimiri_boliviensis_boliviensis
ENSIPUG00000021006	rpusd2	61	57.821	ENSSHAG00000015108	RPUSD2	91	57.821	Sarcophilus_harrisii
ENSIPUG00000021006	rpusd2	81	62.268	ENSSFOG00015019057	rpusd2	80	62.709	Scleropages_formosus
ENSIPUG00000021006	rpusd2	81	69.091	ENSSMAG00000000903	rpusd2	94	69.091	Scophthalmus_maximus
ENSIPUG00000021006	rpusd2	82	67.969	ENSSDUG00000019139	rpusd2	85	68.164	Seriola_dumerili
ENSIPUG00000021006	rpusd2	82	67.383	ENSSLDG00000005938	rpusd2	85	67.578	Seriola_lalandi_dorsalis
ENSIPUG00000021006	rpusd2	78	60.521	ENSSARG00000002792	RPUSD2	81	60.521	Sorex_araneus
ENSIPUG00000021006	rpusd2	80	59.627	ENSSPUG00000001206	RPUSD2	91	59.627	Sphenodon_punctatus
ENSIPUG00000021006	rpusd2	84	66.270	ENSSPAG00000003578	rpusd2	87	67.391	Stegastes_partitus
ENSIPUG00000021006	rpusd2	82	57.764	ENSSSCG00000036700	RPUSD2	85	57.764	Sus_scrofa
ENSIPUG00000021006	rpusd2	81	68.347	ENSTRUG00000025880	rpusd2	93	68.548	Takifugu_rubripes
ENSIPUG00000021006	rpusd2	81	71.605	ENSTNIG00000017329	rpusd2	95	71.959	Tetraodon_nigroviridis
ENSIPUG00000021006	rpusd2	79	53.448	ENSTBEG00000007933	RPUSD2	82	53.448	Tupaia_belangeri
ENSIPUG00000021006	rpusd2	79	59.140	ENSTTRG00000010585	RPUSD2	83	59.140	Tursiops_truncatus
ENSIPUG00000021006	rpusd2	79	59.529	ENSUAMG00000001470	RPUSD2	88	59.529	Ursus_americanus
ENSIPUG00000021006	rpusd2	79	59.529	ENSUMAG00000012487	RPUSD2	72	59.529	Ursus_maritimus
ENSIPUG00000021006	rpusd2	79	60.259	ENSVPAG00000003844	RPUSD2	82	60.259	Vicugna_pacos
ENSIPUG00000021006	rpusd2	79	58.672	ENSVVUG00000026590	RPUSD2	81	58.672	Vulpes_vulpes
ENSIPUG00000021006	rpusd2	80	60.338	ENSXETG00000015973	rpusd2	99	60.338	Xenopus_tropicalis
ENSIPUG00000021006	rpusd2	81	70.981	ENSXMAG00000021821	rpusd2	95	70.981	Xiphophorus_maculatus