EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000021097 (Gene tree)
Gene ID
108276910
Gene Symbol
msi2a
Alias
-
Full Name
RNA-binding protein Musashi homolog 2
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
206095 bases
Position
chr16:23614947-23821041
Accession
108276910
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000031324RRM_1PF00076.224.2e-3412
ENSIPUP00000031324RRM_1PF00076.224.2e-3422
ENSIPUP00000031314RRM_1PF00076.229.4e-3412
ENSIPUP00000031314RRM_1PF00076.229.4e-3422
ENSIPUP00000031344RRM_1PF00076.221.2e-3312
ENSIPUP00000031344RRM_1PF00076.221.2e-3322
ENSIPUP00000031359RRM_1PF00076.229.7e-3012
ENSIPUP00000031359RRM_1PF00076.229.7e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000032614-939-ENSIPUP00000031359312 (aa)--
ENSIPUT00000032567-1956XM_017489010ENSIPUP00000031314406 (aa)XP_017344499A0A2D0SPS3
ENSIPUT00000032578-1659XM_017489021ENSIPUP00000031324307 (aa)XP_017344510-
ENSIPUT00000032598-2041XM_017489011ENSIPUP00000031344446 (aa)XP_017344500-
Gene Model
Click here to download ENSIPUG00000021097's gene model file
Pathways
Pathway IDPathway NameSource
ipu03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021097's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000021097msi2a5943.919ENSIPUG00000002023hnrnpa1a7140.000
ENSIPUG00000021097msi2a10072.327ENSIPUG00000001976msi19380.093
ENSIPUG00000021097msi2a5636.667ENSIPUG00000004992tardbp6836.667
ENSIPUG00000021097msi2a5544.186ENSIPUG00000022432hnrnpa1b7738.636
ENSIPUG00000021097msi2a6147.594ENSIPUG00000020220hnrnpab6145.673
ENSIPUG00000021097msi2a5642.529ENSIPUG00000000698cirbpb8646.753
ENSIPUG00000021097msi2a6737.500ENSIPUG00000019349-7537.500
ENSIPUG00000021097msi2a5541.279ENSIPUG00000001991-7941.341
ENSIPUG00000021097msi2a5743.605ENSIPUG00000019815RO327337.551
ENSIPUG00000021097msi2a6044.565ENSIPUG00000024954hnrnpd6148.684
ENSIPUG00000021097msi2a5848.045ENSIPUG00000024951hnrnpdl9040.146
ENSIPUG00000021097msi2a5847.568ENSIPUG00000018218HNRNPAB6346.364
ENSIPUG00000021097msi2a6139.560ENSIPUG00000022440-9237.200
ENSIPUG00000021097msi2a10097.531ENSIPUG00000003732msi2b10090.735
ENSIPUG00000021097msi2a7739.394ENSIPUG00000006899dazap16439.394
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000021097msi2a10087.195ENSG00000153944MSI29593.852Homo_sapiens
ENSIPUG00000021097msi2a10095.062ENSAPOG00000001658msi2a10095.062Acanthochromis_polyacanthus
ENSIPUG00000021097msi2a9386.452ENSAMEG00000002697MSI29987.742Ailuropoda_melanoleuca
ENSIPUG00000021097msi2a9988.477ENSACIG00000009475msi2a10082.683Amphilophus_citrinellus
ENSIPUG00000021097msi2a5685.185ENSAOCG00000014822msi2a6985.185Amphiprion_ocellaris
ENSIPUG00000021097msi2a10092.332ENSAPEG00000007706msi2a10092.013Amphiprion_percula
ENSIPUG00000021097msi2a9393.885ENSATEG00000003301-10093.525Anabas_testudineus
ENSIPUG00000021097msi2a10095.062ENSATEG00000010498msi2a10095.062Anabas_testudineus
ENSIPUG00000021097msi2a9395.699ENSACAG00000005452MSI28877.747Anolis_carolinensis
ENSIPUG00000021097msi2a10087.195ENSANAG00000037827MSI29593.852Aotus_nancymaae
ENSIPUG00000021097msi2a10094.650ENSACLG00000007752msi2a10094.650Astatotilapia_calliptera
ENSIPUG00000021097msi2a10098.765ENSAMXG00000032796msi2a9598.770Astyanax_mexicanus
ENSIPUG00000021097msi2a10097.119ENSAMXG00000010474msi2b10093.610Astyanax_mexicanus
ENSIPUG00000021097msi2a9392.466ENSBTAG00000004406MSI29793.836Bos_taurus
ENSIPUG00000021097msi2a7958.366WBGene00003423msi-17858.366Caenorhabditis_elegans
ENSIPUG00000021097msi2a10087.195ENSCJAG00000013998MSI29593.852Callithrix_jacchus
ENSIPUG00000021097msi2a9386.408ENSCAFG00020025620MSI28187.742Canis_lupus_dingo
ENSIPUG00000021097msi2a10086.280ENSCHIG00000016580MSI29592.213Capra_hircus
ENSIPUG00000021097msi2a9388.298ENSCPOG00000034042MSI29989.716Cavia_porcellus
ENSIPUG00000021097msi2a10087.195ENSCCAG00000033927MSI29593.852Cebus_capucinus
ENSIPUG00000021097msi2a9391.556ENSCATG00000040879MSI29593.852Cercocebus_atys
ENSIPUG00000021097msi2a10082.659ENSCLAG00000014325MSI210082.659Chinchilla_lanigera
ENSIPUG00000021097msi2a10087.195ENSCSAG00000005633MSI29593.852Chlorocebus_sabaeus
ENSIPUG00000021097msi2a8966.786ENSCHOG00000008660MSI28388.235Choloepus_hoffmanni
ENSIPUG00000021097msi2a9397.253ENSCPBG00000009942MSI28997.238Chrysemys_picta_bellii
ENSIPUG00000021097msi2a8754.146ENSCING00000018579-9753.636Ciona_intestinalis
ENSIPUG00000021097msi2a8754.817ENSCSAVG00000010397-9558.305Ciona_savignyi
ENSIPUG00000021097msi2a9391.556ENSCANG00000036414MSI210087.742Colobus_angolensis_palliatus
ENSIPUG00000021097msi2a10086.626ENSCGRG00001013330Msi29593.443Cricetulus_griseus_chok1gshd
ENSIPUG00000021097msi2a9386.174ENSCGRG00000003141Msi210087.460Cricetulus_griseus_crigri
ENSIPUG00000021097msi2a8174.611ENSCSEG00000013557msi2a7681.651Cynoglossus_semilaevis
ENSIPUG00000021097msi2a10080.864ENSCSEG00000003266-10080.247Cynoglossus_semilaevis
ENSIPUG00000021097msi2a6173.913ENSCSEG00000013549msi2a10073.913Cynoglossus_semilaevis
ENSIPUG00000021097msi2a10095.062ENSCVAG00000017075msi2a10095.062Cyprinodon_variegatus
ENSIPUG00000021097msi2a10097.942ENSDARG00000032614msi2b100100.000Danio_rerio
ENSIPUG00000021097msi2a10093.004ENSDARG00000033901msi2a10084.236Danio_rerio
ENSIPUG00000021097msi2a9393.056ENSDNOG00000014501MSI210094.444Dasypus_novemcinctus
ENSIPUG00000021097msi2a5596.460ENSDORG00000028440-10096.460Dipodomys_ordii
ENSIPUG00000021097msi2a8181.633ENSDORG00000005394Msi27790.769Dipodomys_ordii
ENSIPUG00000021097msi2a9654.342FBgn0260943Rbp69065.306Drosophila_melanogaster
ENSIPUG00000021097msi2a7273.684ENSETEG00000012450-6473.684Echinops_telfairi
ENSIPUG00000021097msi2a9366.454ENSEBUG00000006732msi2a7581.429Eptatretus_burgeri
ENSIPUG00000021097msi2a9389.632ENSEASG00005002965MSI29774.857Equus_asinus_asinus
ENSIPUG00000021097msi2a9390.870ENSECAG00000011435MSI29392.511Equus_caballus
ENSIPUG00000021097msi2a8678.261ENSEEUG00000007810MSI210078.571Erinaceus_europaeus
ENSIPUG00000021097msi2a10096.311ENSELUG00000001361msi2b10086.269Esox_lucius
ENSIPUG00000021097msi2a10094.249ENSELUG00000011747msi2a10093.930Esox_lucius
ENSIPUG00000021097msi2a10087.195ENSFCAG00000041686MSI29593.852Felis_catus
ENSIPUG00000021097msi2a6174.359ENSFCAG00000033787-8274.359Felis_catus
ENSIPUG00000021097msi2a9386.452ENSFDAG00000016118MSI210087.742Fukomys_damarensis
ENSIPUG00000021097msi2a10095.062ENSFHEG00000000084msi2a10092.013Fundulus_heteroclitus
ENSIPUG00000021097msi2a5992.308ENSGMOG00000007596-10092.308Gadus_morhua
ENSIPUG00000021097msi2a10083.237ENSGALG00000005567MSI210083.237Gallus_gallus
ENSIPUG00000021097msi2a9684.539ENSGAFG00000006974msi2a9094.040Gambusia_affinis
ENSIPUG00000021097msi2a10090.164ENSGAGG00000016542MSI210085.197Gopherus_agassizii
ENSIPUG00000021097msi2a9391.556ENSGGOG00000013182MSI210087.742Gorilla_gorilla
ENSIPUG00000021097msi2a10094.650ENSHBUG00000020800msi2a10094.650Haplochromis_burtoni
ENSIPUG00000021097msi2a10073.988ENSHGLG00000012444MSI210073.988Heterocephalus_glaber_female
ENSIPUG00000021097msi2a5596.491ENSHGLG00100004028-8796.491Heterocephalus_glaber_male
ENSIPUG00000021097msi2a7881.643ENSHGLG00100003744MSI210083.575Heterocephalus_glaber_male
ENSIPUG00000021097msi2a10094.650ENSHCOG00000000266msi2a10090.172Hippocampus_comes
ENSIPUG00000021097msi2a9683.128ENSHCOG00000017241-9871.891Hippocampus_comes
ENSIPUG00000021097msi2a9388.298ENSSTOG00000007884MSI29989.716Ictidomys_tridecemlineatus
ENSIPUG00000021097msi2a5596.460ENSJJAG00000009467-10096.460Jaculus_jaculus
ENSIPUG00000021097msi2a7882.412ENSJJAG00000006292-10081.910Jaculus_jaculus
ENSIPUG00000021097msi2a10094.650ENSKMAG00000009494msi2a9394.672Kryptolebias_marmoratus
ENSIPUG00000021097msi2a10095.062ENSLBEG00000007061msi2a10092.013Labrus_bergylta
ENSIPUG00000021097msi2a9387.565ENSLBEG00000026223-10080.090Labrus_bergylta
ENSIPUG00000021097msi2a5594.118ENSLACG00000016798MSI29891.209Latimeria_chalumnae
ENSIPUG00000021097msi2a10097.942ENSLOCG00000004675msi2b10088.670Lepisosteus_oculatus
ENSIPUG00000021097msi2a9391.556ENSMFAG00000003775MSI210087.742Macaca_fascicularis
ENSIPUG00000021097msi2a9391.556ENSMMUG00000002069MSI210087.742Macaca_mulatta
ENSIPUG00000021097msi2a10087.195ENSMNEG00000045275MSI29593.852Macaca_nemestrina
ENSIPUG00000021097msi2a9391.556ENSMLEG00000033888MSI210087.742Mandrillus_leucophaeus
ENSIPUG00000021097msi2a10095.885ENSMAMG00000002488-9994.702Mastacembelus_armatus
ENSIPUG00000021097msi2a10095.062ENSMAMG00000010503msi2a10095.062Mastacembelus_armatus
ENSIPUG00000021097msi2a10094.650ENSMZEG00005007676msi2a9894.650Maylandia_zebra
ENSIPUG00000021097msi2a10082.133ENSMAUG00000003862Msi210082.133Mesocricetus_auratus
ENSIPUG00000021097msi2a10087.195ENSMICG00000013598-9593.852Microcebus_murinus
ENSIPUG00000021097msi2a10070.571ENSMICG00000032913-9379.710Microcebus_murinus
ENSIPUG00000021097msi2a10082.370ENSMOCG00000005820Msi210082.370Microtus_ochrogaster
ENSIPUG00000021097msi2a9588.889ENSMMOG00000008348msi2a9093.431Mola_mola
ENSIPUG00000021097msi2a7882.126ENSMODG00000014790MSI210084.058Monodelphis_domestica
ENSIPUG00000021097msi2a10095.062ENSMALG00000000071msi2a10095.062Monopterus_albus
ENSIPUG00000021097msi2a10086.890MGP_CAROLIEiJ_G0016948Msi210096.460Mus_caroli
ENSIPUG00000021097msi2a10086.890ENSMUSG00000069769Msi210096.460Mus_musculus
ENSIPUG00000021097msi2a10086.890MGP_PahariEiJ_G0018079Msi210096.460Mus_pahari
ENSIPUG00000021097msi2a10086.890MGP_SPRETEiJ_G0017795Msi210096.460Mus_spretus
ENSIPUG00000021097msi2a9392.808ENSMPUG00000015377MSI29794.178Mustela_putorius_furo
ENSIPUG00000021097msi2a9392.808ENSMLUG00000007865MSI29794.178Myotis_lucifugus
ENSIPUG00000021097msi2a10082.370ENSNGAG00000017807Msi210082.370Nannospalax_galili
ENSIPUG00000021097msi2a10094.650ENSNBRG00000014596msi2a10092.013Neolamprologus_brichardi
ENSIPUG00000021097msi2a9391.556ENSNLEG00000008059MSI29694.787Nomascus_leucogenys
ENSIPUG00000021097msi2a7285.526ENSOPRG00000000872-6485.526Ochotona_princeps
ENSIPUG00000021097msi2a10082.659ENSODEG00000011974MSI210082.659Octodon_degus
ENSIPUG00000021097msi2a6294.040ENSONIG00000001972msi2a8494.040Oreochromis_niloticus
ENSIPUG00000021097msi2a9992.500ENSOANG00000005667MSI29978.555Ornithorhynchus_anatinus
ENSIPUG00000021097msi2a9392.808ENSOCUG00000010440MSI29794.178Oryctolagus_cuniculus
ENSIPUG00000021097msi2a10095.062ENSORLG00000009671msi2a9795.062Oryzias_latipes
ENSIPUG00000021097msi2a10095.062ENSORLG00020021556msi2a10095.062Oryzias_latipes_hni
ENSIPUG00000021097msi2a10095.062ENSORLG00015004592msi2a9795.062Oryzias_latipes_hsok
ENSIPUG00000021097msi2a10095.062ENSOMEG00000000146msi2a10095.062Oryzias_melastigma
ENSIPUG00000021097msi2a9388.014ENSOGAG00000005621MSI29989.384Otolemur_garnettii
ENSIPUG00000021097msi2a9386.452ENSPPAG00000037697MSI210087.742Pan_paniscus
ENSIPUG00000021097msi2a9392.808ENSPPRG00000001848MSI29494.178Panthera_pardus
ENSIPUG00000021097msi2a7876.151ENSPTIG00000021873-9176.151Panthera_tigris_altaica
ENSIPUG00000021097msi2a9386.452ENSPTIG00000021678MSI29687.742Panthera_tigris_altaica
ENSIPUG00000021097msi2a9391.556ENSPTRG00000009437MSI210087.742Pan_troglodytes
ENSIPUG00000021097msi2a10087.195ENSPANG00000022319MSI29593.852Papio_anubis
ENSIPUG00000021097msi2a9690.136ENSPKIG00000007038-9693.004Paramormyrops_kingsleyae
ENSIPUG00000021097msi2a5294.505ENSPKIG00000017107-8194.505Paramormyrops_kingsleyae
ENSIPUG00000021097msi2a10095.885ENSPSIG00000008618MSI210082.547Pelodiscus_sinensis
ENSIPUG00000021097msi2a10092.332ENSPMGG00000005888msi2a10092.013Periophthalmus_magnuspinnatus
ENSIPUG00000021097msi2a5596.460ENSPEMG00000021793-10096.460Peromyscus_maniculatus_bairdii
ENSIPUG00000021097msi2a10081.638ENSPCIG00000006063MSI210081.921Phascolarctos_cinereus
ENSIPUG00000021097msi2a6192.381ENSPFOG00000019337MSI29292.381Poecilia_formosa
ENSIPUG00000021097msi2a6290.210ENSPLAG00000000436msi2a7690.845Poecilia_latipinna
ENSIPUG00000021097msi2a5689.062ENSPMEG00000013247msi2a8089.062Poecilia_mexicana
ENSIPUG00000021097msi2a10095.062ENSPREG00000000881msi2a10090.663Poecilia_reticulata
ENSIPUG00000021097msi2a9389.076ENSPPYG00000008244-10090.756Pongo_abelii
ENSIPUG00000021097msi2a5490.769ENSPCAG00000010552MSI29386.765Procavia_capensis
ENSIPUG00000021097msi2a5596.183ENSPCOG00000019195-9396.923Propithecus_coquereli
ENSIPUG00000021097msi2a9384.932ENSPVAG00000017053MSI29986.301Pteropus_vampyrus
ENSIPUG00000021097msi2a10094.650ENSPNYG00000018393msi2a10094.650Pundamilia_nyererei
ENSIPUG00000021097msi2a10097.119ENSPNAG00000000844msi2b10093.631Pygocentrus_nattereri
ENSIPUG00000021097msi2a10098.354ENSPNAG00000014957msi2a10095.860Pygocentrus_nattereri
ENSIPUG00000021097msi2a9392.806ENSRNOG00000025338Msi210094.245Rattus_norvegicus
ENSIPUG00000021097msi2a5171.429ENSRBIG00000032064-8485.526Rhinopithecus_bieti
ENSIPUG00000021097msi2a5596.491ENSRROG00000034421-9296.491Rhinopithecus_roxellana
ENSIPUG00000021097msi2a9391.964ENSSBOG00000026425MSI210087.742Saimiri_boliviensis_boliviensis
ENSIPUG00000021097msi2a9387.097ENSSHAG00000008672MSI210088.387Sarcophilus_harrisii
ENSIPUG00000021097msi2a9490.411ENSSFOG00015021687-9794.595Scleropages_formosus
ENSIPUG00000021097msi2a10084.490ENSSFOG00015012168msi2b10069.718Scleropages_formosus
ENSIPUG00000021097msi2a10095.062ENSSMAG00000018484msi2a10095.062Scophthalmus_maximus
ENSIPUG00000021097msi2a10095.062ENSSDUG00000014507msi2a10095.062Seriola_dumerili
ENSIPUG00000021097msi2a10085.075ENSSDUG00000021968-9994.040Seriola_dumerili
ENSIPUG00000021097msi2a10095.062ENSSLDG00000017172msi2a9795.062Seriola_lalandi_dorsalis
ENSIPUG00000021097msi2a6292.405ENSSPUG00000000913-9492.405Sphenodon_punctatus
ENSIPUG00000021097msi2a10095.062ENSSPAG00000017793msi2a9895.062Stegastes_partitus
ENSIPUG00000021097msi2a9692.857ENSSSCG00000038505MSI29693.827Sus_scrofa
ENSIPUG00000021097msi2a7881.643ENSTGUG00000008452MSI210083.575Taeniopygia_guttata
ENSIPUG00000021097msi2a9595.062ENSTRUG00000021248msi2a9690.176Takifugu_rubripes
ENSIPUG00000021097msi2a7977.686ENSTBEG00000001241MSI27377.686Tupaia_belangeri
ENSIPUG00000021097msi2a9386.134ENSTTRG00000002189MSI29196.711Tursiops_truncatus
ENSIPUG00000021097msi2a9395.105ENSUAMG00000000700MSI29696.396Ursus_americanus
ENSIPUG00000021097msi2a8994.672ENSUMAG00000000505MSI29596.373Ursus_maritimus
ENSIPUG00000021097msi2a5982.418ENSVPAG00000006837-6282.418Vicugna_pacos
ENSIPUG00000021097msi2a10087.973ENSVVUG00000011783MSI210094.178Vulpes_vulpes
ENSIPUG00000021097msi2a9992.975ENSXCOG00000006113msi2a10085.222Xiphophorus_couchianus
ENSIPUG00000021097msi2a10095.062ENSXMAG00000000608msi2a10095.062Xiphophorus_maculatus

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